BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0004.0025.p         (181 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001099368.1| putative outer membrane protein; putative pe...   248   2e-64
ref|YP_003777763.1| OmpA family protein [Herbaspirillum seropedi...   248   2e-64
ref|YP_411448.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]...   236   1e-60
ref|YP_545775.1| OmpA/MotB [Methylobacillus flagellatus KT] >gi|...   233   9e-60
ref|YP_001352854.1| OmpA family protein [Janthinobacterium sp. M...   231   4e-59

>ref|YP_001099368.1| putative outer membrane protein; putative peptidoglycan-associated
           (lipo)-protein [Herminiimonas arsenicoxydans]
 emb|CAL61241.1| conserved hypothetical protein; putative OmpA domain [Herminiimonas
           arsenicoxydans]
          Length = 225

 Score =  248 bits (634), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 119/160 (74%), Positives = 136/160 (85%)

Query: 18  AAGAAIGAGLGAVIGNVWSNRMENQKRAMEQATQGTGVQVTQTQDNRLKLEIPSDISFNT 77
           A GAA+G  LGAV GNVWS+RMENQKRAMEQATQGTGVQVTQT DNRLKL+IPSDISF T
Sbjct: 53  AGGAAVGGILGAVAGNVWSSRMENQKRAMEQATQGTGVQVTQTSDNRLKLDIPSDISFAT 112

Query: 78  GRADIQPNFRAVLDKFAATLNENPATTVNIIGHTDSTGSDAVNNPLSMERAARTRDYLTA 137
           GR+DI  +FR +LD+FA  L +NPA TV IIGHTDSTGSDA+NNPLS +RA+RTRDYL  
Sbjct: 113 GRSDINSSFRPILDRFATGLVDNPAATVTIIGHTDSTGSDAINNPLSFDRASRTRDYLAG 172

Query: 138 RGVSPGRFHIDGRGSHEPLVANDTEANRAKNRRVEIFVAE 177
           RGV+P R H+DGRGS EP+ +N  EA RA+NRRVEI+VAE
Sbjct: 173 RGVAPQRIHVDGRGSREPVASNANEAGRARNRRVEIYVAE 212


>ref|YP_003777763.1| OmpA family protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ65855.1| OmpA family protein [Herbaspirillum seropedicae SmR1]
          Length = 241

 Score =  248 bits (634), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 115/145 (79%), Positives = 134/145 (92%)

Query: 33  NVWSNRMENQKRAMEQATQGTGVQVTQTQDNRLKLEIPSDISFNTGRADIQPNFRAVLDK 92
           N+WSNRMENQKRAME+ATQGTGVQV+QT DNRLKLEIPSDISF+TGRADI+P  R VLD+
Sbjct: 70  NIWSNRMENQKRAMEEATQGTGVQVSQTADNRLKLEIPSDISFDTGRADIKPEMRPVLDR 129

Query: 93  FAATLNENPATTVNIIGHTDSTGSDAVNNPLSMERAARTRDYLTARGVSPGRFHIDGRGS 152
           FAATL ENPATTV I+GHTD+TGSDA+N+PLS++RA+RTRDYL++RGV+  RF I GRGS
Sbjct: 130 FAATLVENPATTVTIVGHTDNTGSDAINDPLSLQRASRTRDYLSSRGVAANRFSIQGRGS 189

Query: 153 HEPLVANDTEANRAKNRRVEIFVAE 177
           HEPLVAN ++ANRA+NRRVEIFVAE
Sbjct: 190 HEPLVANTSDANRARNRRVEIFVAE 214


>ref|YP_411448.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
 gb|ABB74056.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
          Length = 225

 Score =  236 bits (601), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 110/148 (74%), Positives = 126/148 (85%)

Query: 33  NVWSNRMENQKRAMEQATQGTGVQVTQTQDNRLKLEIPSDISFNTGRADIQPNFRAVLDK 92
           NVWS RME QKR MEQAT GTGV+V +T DNRL+L+IPSDISF+TGRADI+PNFR VLD 
Sbjct: 73  NVWSRRMEEQKREMEQATAGTGVEVVKTSDNRLRLDIPSDISFDTGRADIRPNFRPVLDS 132

Query: 93  FAATLNENPATTVNIIGHTDSTGSDAVNNPLSMERAARTRDYLTARGVSPGRFHIDGRGS 152
           FA +LN NP T V IIGHTDS+GSDAVNNPLS+ RAA TRDYL +RGVSP R  I+GRGS
Sbjct: 133 FATSLNNNPITEVTIIGHTDSSGSDAVNNPLSLNRAASTRDYLASRGVSPNRVRIEGRGS 192

Query: 153 HEPLVANDTEANRAKNRRVEIFVAEPQQ 180
            EP+VANDT  NRA+NRRVEI+VAEP++
Sbjct: 193 REPIVANDTPQNRARNRRVEIYVAEPKE 220


>ref|YP_545775.1| OmpA/MotB [Methylobacillus flagellatus KT]
 gb|ABE49934.1| OmpA/MotB [Methylobacillus flagellatus KT]
          Length = 214

 Score =  233 bits (594), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 109/146 (74%), Positives = 124/146 (84%)

Query: 33  NVWSNRMENQKRAMEQATQGTGVQVTQTQDNRLKLEIPSDISFNTGRADIQPNFRAVLDK 92
           NVWS RME QKR ME+AT+ TGV+V+QT+DN+LKL IPSDISF +G+ADI+PNFR VLD 
Sbjct: 65  NVWSKRMEEQKRQMEEATKDTGVEVSQTEDNQLKLSIPSDISFASGKADIEPNFRVVLDN 124

Query: 93  FAATLNENPATTVNIIGHTDSTGSDAVNNPLSMERAARTRDYLTARGVSPGRFHIDGRGS 152
           FA TL  NP T V IIGHTD+TGSDA+NNPLS+ RAA TRDYL ARG++  RF IDGRGS
Sbjct: 125 FATTLKNNPNTLVTIIGHTDNTGSDAINNPLSVNRAANTRDYLIARGIAASRFTIDGRGS 184

Query: 153 HEPLVANDTEANRAKNRRVEIFVAEP 178
            EPLV+NDT ANRAKNRRVEIFVAEP
Sbjct: 185 REPLVSNDTPANRAKNRRVEIFVAEP 210


>ref|YP_001352854.1| OmpA family protein [Janthinobacterium sp. Marseille]
 gb|ABR90219.1| OmpA family protein [Janthinobacterium sp. Marseille]
          Length = 229

 Score =  231 bits (589), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 107/145 (73%), Positives = 125/145 (86%)

Query: 33  NVWSNRMENQKRAMEQATQGTGVQVTQTQDNRLKLEIPSDISFNTGRADIQPNFRAVLDK 92
           NVWS++MENQKRAMEQATQGTGVQV+QT DNRLKLEIPSDISF TGR+DI P+ + +LD+
Sbjct: 68  NVWSSKMENQKRAMEQATQGTGVQVSQTSDNRLKLEIPSDISFATGRSDINPSLQPILDR 127

Query: 93  FAATLNENPATTVNIIGHTDSTGSDAVNNPLSMERAARTRDYLTARGVSPGRFHIDGRGS 152
           FA  L +NP  TV IIGHTDSTGSDA+NNPLS +RA+RTRDYLT RGV+P R ++DGRGS
Sbjct: 128 FATGLVDNPTATVTIIGHTDSTGSDAINNPLSFDRASRTRDYLTGRGVAPQRIYVDGRGS 187

Query: 153 HEPLVANDTEANRAKNRRVEIFVAE 177
           HEP+ +N   A RA+NRRVEIFVAE
Sbjct: 188 HEPIASNADAAGRARNRRVEIFVAE 212