BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0010.p (269 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002490159.1| hypothetical protein Mnod_7995 [Methylobacte... 256 2e-66 ref|YP_003979111.1| hypothetical protein AXYL_03076 [Achromobact... 253 3e-65 ref|ZP_06687726.1| conserved hypothetical protein [Achromobacter... 251 1e-64 ref|YP_001233906.1| hypothetical protein Acry_0767 [Acidiphilium... 248 1e-63 ref|YP_004283334.1| hypothetical protein ACMV_11050 [Acidiphiliu... 248 1e-63 >ref|YP_002490159.1| hypothetical protein Mnod_7995 [Methylobacterium nodulans ORS 2060] ref|YP_002497522.1| hypothetical protein Mnod_2239 [Methylobacterium nodulans ORS 2060] gb|ACL57219.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060] gb|ACL62992.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060] Length = 263 Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 148/257 (57%), Positives = 186/257 (72%) Query: 6 ISASDLAIASVLVMINAVISIGLGLQLHKPVLWAAVRMVVQLLLVGLLLRHVLELRSPLA 65 +SA+DLA+A+ LV+++A +S+ L L LH+ ++ AA RMVVQL+ VG LLR V L P+A Sbjct: 6 LSATDLALAASLVVLDAGLSLALRLNLHRQLVLAAARMVVQLIGVGYLLRFVFALNDPVA 65 Query: 66 TSLVILAMILAAAREVAVRPKWRLKGWKSYGISTAMVSATSIATVLLALLTAIRPSPWYD 125 T L++L M L AAREVA RP+ R +G+ + IS V ++AT LAL TAIRP+PWYD Sbjct: 66 TLLLVLVMSLVAAREVAARPERRFRGFVTLAISLGSVLVATLATAGLALSTAIRPTPWYD 125 Query: 126 AHYAVPLMGIVLGSVLNSASLGLDIFFSGVTSSRNVVEGRLALGATRYEALAPHMRNAIR 185 YAVPL GIVLGSVLN+ASL LD GV R+ +E +L LG +A A R A+R Sbjct: 126 PRYAVPLAGIVLGSVLNAASLTLDSLLGGVRRERSAIEAQLGLGVPFRQAAAGLFRTAVR 185 Query: 186 SGLIPVINQMSAAGIITLPGIMSGQILAGVDAVNAAKYQILLMFILAGASGLAATGSIYL 245 GL+P+INQMSAAGIITLPGIM+GQILAG+D V A KYQILL+F+L GASGLAA + L Sbjct: 186 RGLLPIINQMSAAGIITLPGIMTGQILAGMDPVEAVKYQILLLFLLTGASGLAALATAGL 245 Query: 246 AANAITDERHRLRCDRL 262 A +TD+R RLR DRL Sbjct: 246 ALRCLTDDRQRLRLDRL 262 >ref|YP_003979111.1| hypothetical protein AXYL_03076 [Achromobacter xylosoxidans A8] gb|ADP16396.1| hypothetical protein AXYL_03076 [Achromobacter xylosoxidans A8] Length = 265 Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 144/258 (55%), Positives = 183/258 (70%) Query: 6 ISASDLAIASVLVMINAVISIGLGLQLHKPVLWAAVRMVVQLLLVGLLLRHVLELRSPLA 65 + A+DLAIAS+LV+++A IS L L L + VLWAA+R VVQLLLVG +LR V +P Sbjct: 6 LQATDLAIASLLVLLSAGISFALRLNLQRQVLWAALRTVVQLLLVGHILRIVFAHAAPWL 65 Query: 66 TSLVILAMILAAAREVAVRPKWRLKGWKSYGISTAMVSATSIATVLLALLTAIRPSPWYD 125 T+LV+ M+ AAREVA RPK RL + + V+ T++ TVL L TA+RP PWYD Sbjct: 66 TALVVAVMMALAAREVAARPKARLTQRGNGWVGAMAVAGTTVITVLFILNTALRPEPWYD 125 Query: 126 AHYAVPLMGIVLGSVLNSASLGLDIFFSGVTSSRNVVEGRLALGATRYEALAPHMRNAIR 185 Y + L+GIVLGSVLN+ASL LD SG + +E RLALGAT +EA + +R ++R Sbjct: 126 PRYTIALIGIVLGSVLNAASLALDGVLSGARREKLAIEARLALGATAHEAFSSLLRESVR 185 Query: 186 SGLIPVINQMSAAGIITLPGIMSGQILAGVDAVNAAKYQILLMFILAGASGLAATGSIYL 245 G++P INQMSAAGIITLPGIM+GQI+AG+D + AAKYQILLMF+L GAS +AA + Y Sbjct: 186 RGIVPSINQMSAAGIITLPGIMTGQIIAGMDPIEAAKYQILLMFLLCGASAMAAMAAAYG 245 Query: 246 AANAITDERHRLRCDRLE 263 A +TDER RLR DRL Sbjct: 246 AMRRLTDERGRLRLDRLH 263 >ref|ZP_06687726.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gb|EFF75376.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 266 Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 149/261 (57%), Positives = 185/261 (70%) Query: 6 ISASDLAIASVLVMINAVISIGLGLQLHKPVLWAAVRMVVQLLLVGLLLRHVLELRSPLA 65 + ASDLAIAS+LV++ A IS L LH+ VLWAAVR V QLLLVG +LR V +P Sbjct: 6 LHASDLAIASLLVLLCAAISFVARLDLHRQVLWAAVRTVAQLLLVGHILRVVFAHANPWL 65 Query: 66 TSLVILAMILAAAREVAVRPKWRLKGWKSYGISTAMVSATSIATVLLALLTAIRPSPWYD 125 T+ V+ M+ AAREVA RPK RL + + T V AT++ T L L TA+RP PWYD Sbjct: 66 TAGVVAVMMALAAREVAARPKARLTSHGNGWVGTLAVVATTLVTALFVLNTALRPEPWYD 125 Query: 126 AHYAVPLMGIVLGSVLNSASLGLDIFFSGVTSSRNVVEGRLALGATRYEALAPHMRNAIR 185 YA+ L+GIVLGSVLN+ASL LD SGV + +E RLALGAT +A + +R ++R Sbjct: 126 PRYAIALVGIVLGSVLNAASLALDGMLSGVRREKLAIEARLALGATARQAFSSLLRESVR 185 Query: 186 SGLIPVINQMSAAGIITLPGIMSGQILAGVDAVNAAKYQILLMFILAGASGLAATGSIYL 245 G++P INQMSAAGIITLPGIM+GQI+AG+D ++AAKYQILLMF+L GASG+AA G+ Y Sbjct: 186 RGIVPSINQMSAAGIITLPGIMTGQIIAGMDPIDAAKYQILLMFLLCGASGMAAMGAAYG 245 Query: 246 AANAITDERHRLRCDRLENKK 266 A +TDER RLR DRL K Sbjct: 246 AMRRLTDERGRLRLDRLAASK 266 >ref|YP_001233906.1| hypothetical protein Acry_0767 [Acidiphilium cryptum JF-5] ref|ZP_08631566.1| hypothetical protein APM_0482 [Acidiphilium sp. PM] gb|ABQ29987.1| conserved hypothetical protein 245 [Acidiphilium cryptum JF-5] gb|EGO96648.1| hypothetical protein APM_0482 [Acidiphilium sp. PM] Length = 263 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 140/261 (53%), Positives = 186/261 (71%), Gaps = 6/261 (2%) Query: 6 ISASDLAIASVLVMINAVISIGLGLQLHKPVLWAAVRMVVQLLLVGLLLRHVLELRSPLA 65 ++ +DL IA+ LV+++A+ S+ LGL+LH+ +L AA R VQLLL+G LLR V +PL Sbjct: 6 LTPADLLIAASLVLVDALASVLLGLRLHRQLLVAAARCAVQLLLIGFLLRFVFAAEAPLL 65 Query: 66 TSLVILAMILAAAREVAVRPKWRLKGWKSYGISTAMVSATSIATVL---LALLTAIRPSP 122 T +IL M+ A REVA RP+ RL YG A +SA ++AT + AL TAIRP P Sbjct: 66 TLGIILLMVAIAGREVAARPERRLA---RYGNQIAGLSAVALATFITAVFALATAIRPEP 122 Query: 123 WYDAHYAVPLMGIVLGSVLNSASLGLDIFFSGVTSSRNVVEGRLALGATRYEALAPHMRN 182 WY A YA+PL GI+LG+ LN+ASL LD S VT R +E +LALGAT +A+ P +R Sbjct: 123 WYAARYAIPLAGIMLGNALNAASLSLDALLSAVTRERAAIEAQLALGATFRDAMRPLIRE 182 Query: 183 AIRSGLIPVINQMSAAGIITLPGIMSGQILAGVDAVNAAKYQILLMFILAGASGLAATGS 242 A+R G++P++N MSAAG++TLPGIM+GQILAG+ V+A KYQI+LMF+LAGA+G+AA G+ Sbjct: 183 AVRRGMLPIVNTMSAAGLVTLPGIMTGQILAGLSPVSAVKYQIMLMFLLAGATGIAAVGA 242 Query: 243 IYLAANAITDERHRLRCDRLE 263 Y AA +TD R RLR DRL Sbjct: 243 AYFAARRLTDGRERLRLDRLH 263 >ref|YP_004283334.1| hypothetical protein ACMV_11050 [Acidiphilium multivorum AIU301] dbj|BAJ80452.1| hypothetical protein ACMV_11050 [Acidiphilium multivorum AIU301] Length = 263 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 140/261 (53%), Positives = 186/261 (71%), Gaps = 6/261 (2%) Query: 6 ISASDLAIASVLVMINAVISIGLGLQLHKPVLWAAVRMVVQLLLVGLLLRHVLELRSPLA 65 ++ +DL IA+ LV+++A+ S+ LGL+LH+ +L AA R VQLLL+G LLR V +PL Sbjct: 6 LTPADLLIAASLVLVDALASVLLGLRLHRQLLVAAARCAVQLLLIGFLLRFVFAAEAPLL 65 Query: 66 TSLVILAMILAAAREVAVRPKWRLKGWKSYGISTAMVSATSIATVL---LALLTAIRPSP 122 T +IL M+ A REVA RP+ RL YG A +SA ++AT + AL TAIRP P Sbjct: 66 TLGIILLMVAIAGREVAARPERRLA---RYGNQIAGLSAVALATFITAIFALATAIRPEP 122 Query: 123 WYDAHYAVPLMGIVLGSVLNSASLGLDIFFSGVTSSRNVVEGRLALGATRYEALAPHMRN 182 WY A YA+PL GI+LG+ LN+ASL LD S VT R +E +LALGAT +A+ P +R Sbjct: 123 WYAARYAIPLAGIMLGNALNAASLSLDALLSAVTRERAAIEAQLALGATFRDAMRPLIRE 182 Query: 183 AIRSGLIPVINQMSAAGIITLPGIMSGQILAGVDAVNAAKYQILLMFILAGASGLAATGS 242 A+R G++P++N MSAAG++TLPGIM+GQILAG+ V+A KYQI+LMF+LAGA+G+AA G+ Sbjct: 183 AVRRGMLPIVNTMSAAGLVTLPGIMTGQILAGLSPVSAVKYQIMLMFLLAGATGIAAVGA 242 Query: 243 IYLAANAITDERHRLRCDRLE 263 Y AA +TD R RLR DRL Sbjct: 243 AYFAARRLTDGRERLRLDRLH 263