BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0004.p (448 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_03544206.1| peptidase M50 [Comamonas testosteroni KF-1] >... 457 e-126 ref|ZP_07044989.1| HlyD domain-containing protein [Comamonas tes... 444 e-122 ref|YP_934062.1| HlyD domain-containing protein [Azoarcus sp. BH... 362 6e-98 ref|YP_422635.1| hypothetical protein amb3272 [Magnetospirillum ... 350 2e-94 ref|YP_420506.1| hypothetical protein amb1143 [Magnetospirillum ... 348 9e-94 >ref|ZP_03544206.1| peptidase M50 [Comamonas testosteroni KF-1] gb|EED68492.1| peptidase M50 [Comamonas testosteroni KF-1] Length = 703 Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust. Identities = 246/449 (54%), Positives = 302/449 (67%), Gaps = 3/449 (0%) Query: 3 IAAWATLAWVWLPEGGIRQAAFLLSTTTWISTLAINASPFMRFDGYYILSDYLGLPNLHN 62 IAAWA LAWVWLPEG R AFLL+TTTW+STLAINASPFMRFDGY++LSD+L +PNLH+ Sbjct: 255 IAAWALLAWVWLPEGAPRSMAFLLATTTWVSTLAINASPFMRFDGYFLLSDFLQMPNLHS 314 Query: 63 RCFALARWDLRERLFALGEPPPEVFPPHRRIGLILFAWTVWIYRLVLFLGIAALVYHFFI 122 R FALARWD+RER+F LGEPPPE F +R GLILFAW WIYRLVLFLGIAALVYHFFI Sbjct: 315 RAFALARWDMRERMFKLGEPPPEFFSNAKRRGLILFAWATWIYRLVLFLGIAALVYHFFI 374 Query: 123 KAVGILLFIVEMVWFVSLPLWNEMQAWRRRRSALRHSRRARCSAVLAVALALLFLLPWPD 182 KA+GILLF+VE+VWF++ P+W+E+ AW R + SRRAR SAV A L L LP P Sbjct: 375 KALGILLFLVEIVWFIAKPVWSEISAWSSRWPQILRSRRARWSAVGAFVLVALCWLPLPA 434 Query: 183 RIRTSGMLQPQTHMALYAPPQSQVESLPVSNMQQVPAGQTLLGLGSAELDLRTGETDARQ 242 IRT GMLQ L+A SQ++ + N + + L S L + DA++ Sbjct: 435 PIRTEGMLQSSDIWPLHALDASQLQQQILGNADTIALDAPVFVLDSPALKAAQAQNDAQR 494 Query: 243 QSLSWQSAAAGFDAATRKDWQVLNDQLVFSQAEQAAVGADFQRYRPTAPYAGVLVDVDPD 302 S Q AAAGFD+ R+DWQVL ++ + + +Q AV + RYR A AGVL DVDPD Sbjct: 495 IQYSQQIAAAGFDSELRRDWQVLQERQLQAATQQQAVETEASRYRLNASGAGVLRDVDPD 554 Query: 303 LRVGQWLTNREYLGSLVAAGKWQVVTYVGEDAVHRIAPGDRALFIADGLGSRTLSLTVAS 362 LR G WL E LG +V + +V+ YV E+ V RI+ GD A+FIAD L L V S Sbjct: 555 LRSGDWLARNELLGRVVGRDRLEVLAYVQEEDVQRISTGDSAIFIADAGVGPVLDLRVRS 614 Query: 363 IDRDATRTLGEPELATMFGGDVLAREKSGVIYPEQAVFRVALHVAEPLPAE---QQEWRG 419 ID+DA+RTL E L++ GG + R +YPE+ V+RV L V PL A+ Q WRG Sbjct: 615 IDQDASRTLSEAALSSAAGGMIQVRSMQSTLYPERPVYRVVLDVVTPLEADTGFQHRWRG 674 Query: 420 KVTIAGKWEVPALRFLRTAASVAWREAGF 448 KV I G+WE A +F++TA SV WREAGF Sbjct: 675 KVAIRGRWEAAAAQFVKTATSVFWREAGF 703 >ref|ZP_07044989.1| HlyD domain-containing protein [Comamonas testosteroni S44] gb|EFI61252.1| HlyD domain-containing protein [Comamonas testosteroni S44] Length = 690 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 244/449 (54%), Positives = 303/449 (67%), Gaps = 3/449 (0%) Query: 3 IAAWATLAWVWLPEGGIRQAAFLLSTTTWISTLAINASPFMRFDGYYILSDYLGLPNLHN 62 IAAWA LAWVWLPEG + AFLL+ TTW+STL INASPFMRFDGY++LSD+L +PNLH+ Sbjct: 242 IAAWALLAWVWLPEGTPKSMAFLLANTTWVSTLVINASPFMRFDGYFLLSDFLQMPNLHS 301 Query: 63 RCFALARWDLRERLFALGEPPPEVFPPHRRIGLILFAWTVWIYRLVLFLGIAALVYHFFI 122 R FALARWDLRE+LF LGEPPPE F +R GLILFAW WIYRLVLFLGIAALVYHFFI Sbjct: 302 RAFALARWDLREKLFKLGEPPPESFTVAKRRGLILFAWATWIYRLVLFLGIAALVYHFFI 361 Query: 123 KAVGILLFIVEMVWFVSLPLWNEMQAWRRRRSALRHSRRARCSAVLAVALALLFLLPWPD 182 KA+GILLF+VE+VWF++ PLW+E+ AW R + SRRAR SA++A L L LP P Sbjct: 362 KALGILLFLVEIVWFIAKPLWSEIAAWHLRWPQIVRSRRARWSAIVAFVLVALCWLPLPA 421 Query: 183 RIRTSGMLQPQTHMALYAPPQSQVESLPVSNMQQVPAGQTLLGLGSAELDLRTGETDARQ 242 IRT GMLQ L+A SQ++ + + + V + L S L + DA++ Sbjct: 422 PIRTEGMLQSSEIWPLHALDASQLQQQMLGDARMVEVDAPVFMLDSPALKAAQAQNDAQR 481 Query: 243 QSLSWQSAAAGFDAATRKDWQVLNDQLVFSQAEQAAVGADFQRYRPTAPYAGVLVDVDPD 302 S Q AAAGFD+ R+DWQVL ++ + + +Q AV + RYR A AGVL DVDPD Sbjct: 482 TQYSQQIAAAGFDSELRRDWQVLQERQLQAATQQQAVETEASRYRLNASGAGVLRDVDPD 541 Query: 303 LRVGQWLTNREYLGSLVAAGKWQVVTYVGEDAVHRIAPGDRALFIADGLGSRTLSLTVAS 362 LR G WL E LG +V + + +V+ YV E+ V RI GD A+FIAD L LTV S Sbjct: 542 LRPGDWLARNELLGRVVGSDRLEVLAYVQEEDVQRIGIGDSAIFIADAGVGPVLDLTVRS 601 Query: 363 IDRDATRTLGEPELATMFGGDVLAREKSGVIYPEQAVFRVALHVAEPLPAE---QQEWRG 419 +D+DA+RTL E L+ GG + R G +YPE+ V+RV L V PL + Q WRG Sbjct: 602 VDQDASRTLSEAALSAAAGGMIQVRSMQGTLYPERPVYRVVLDVVTPLETDAVLQHRWRG 661 Query: 420 KVTIAGKWEVPALRFLRTAASVAWREAGF 448 KV+I G+WE A +F++TA SV WREAGF Sbjct: 662 KVSIRGQWEAAAAQFVKTATSVFWREAGF 690 >ref|YP_934062.1| HlyD domain-containing protein [Azoarcus sp. BH72] emb|CAL95175.1| membrane protein with HlyD domain [Azoarcus sp. BH72] Length = 703 Score = 362 bits (930), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 209/438 (47%), Positives = 279/438 (63%), Gaps = 4/438 (0%) Query: 15 PEGGIRQAAFLLSTTTWISTLAINASPFMRFDGYYILSDYLGLPNLHNRCFALARWDLRE 74 P+GG+R A F+L+TT+W++TLAINASPFMRFDGY+ILSD+L LPNLH R FALARW LRE Sbjct: 266 PDGGLRSAFFVLATTSWVATLAINASPFMRFDGYFILSDWLDLPNLHERSFALARWKLRE 325 Query: 75 RLFALGEPPPEVFPPHRRIGLILFAWTVWIYRLVLFLGIAALVYHFFIKAVGILLFIVEM 134 LF L EP PE F P R GLILFAW W+YRLV+F+GIA LVYHFF K +G+ LF+VE+ Sbjct: 326 ALFDLREPCPEHFAPARARGLILFAWATWLYRLVVFIGIALLVYHFFFKLLGVFLFLVEI 385 Query: 135 VWFVSLPLWNEMQAWRRRRSALRHSRRARCSAVLAVALALLFLLPWPDRIRTSGMLQPQT 194 WF++LP+ +E+QAWR+R A+R RR R A +AL +L LP P R+ SG+++ Sbjct: 386 AWFIALPVRHELQAWRQRWPAIRARRRIRLVAPALLALLVLLALPLPGRVIASGVVRAAA 445 Query: 195 HMALYAPPQSQVESLPVSNMQQVPAGQTLLGLGSAELDLRTGETDARQQSLSWQSAAAGF 254 ++AP ++++ + V G + L + EL R A+ + L WQ+ AGF Sbjct: 446 VWPVFAPAAARLQQFDLREGSAVAEGAVIAVLDNPELAARREAVVAKVERLRWQAQTAGF 505 Query: 255 DAATRKDWQVLNDQLVFSQAEQAAVGADFQRYRPTAPYAGVLVDVDPDLRVGQWLTNREY 314 DA R Q ++L ++AE A + + RYRP AP+AG L D+DPDL+ GQWL N+E Sbjct: 506 DAEARSRLQSSQEELATAEAELAGIDEEAARYRPAAPFAGRLRDLDPDLQAGQWLANKEQ 565 Query: 315 LGSLVAAGKWQVVTYVGEDAVHRIAPGDRALFIADGLGSRTLSLTVASIDRDATRTLGEP 374 + LV G V T++ E+AV R+A GDR +F+ D L LTV++ID DA+R LG Sbjct: 566 IALLVGDGGRIVETWLDEEAVKRLAVGDRGVFVPDSGEGPVLRLTVSAIDADASRVLGRG 625 Query: 375 ELATMFGGDVLAREKSGVIYPEQAVFRVALHVAEPLPA----EQQEWRGKVTIAGKWEVP 430 LA GG +L RE++ + PE AV+ V L V E A Q RG V+I +WE P Sbjct: 626 ILAAPAGGHILVRERNRQLIPEHAVYHVVLAVDEDPAAGTAGHDQMLRGTVSIRARWEAP 685 Query: 431 ALRFLRTAASVAWREAGF 448 R+LR A V RE+G Sbjct: 686 LQRYLRNALMVVIRESGL 703 >ref|YP_422635.1| hypothetical protein amb3272 [Magnetospirillum magneticum AMB-1] dbj|BAE52076.1| hypothetical protein [Magnetospirillum magneticum AMB-1] Length = 701 Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 194/449 (43%), Positives = 278/449 (61%), Gaps = 6/449 (1%) Query: 1 MGIAAWATLAWVWLPEGGIRQAAFLLSTTTWISTLAINASPFMRFDGYYILSDYLGLPNL 60 + +AAWATL W +LP+GG+RQA F+L+ TW+S+LAIN SPFMRFDGY++ D L LPNL Sbjct: 256 LSVAAWATLLWAFLPDGGMRQAVFVLAAFTWVSSLAINLSPFMRFDGYFLAMDALELPNL 315 Query: 61 HNRCFALARWDLRERLFALGEPPPEVFPPHRRIGLILFAWTVWIYRLVLFLGIAALVYHF 120 H R FA+A+W LRE LF LGEPPPE P R+ +++FA+ VWIYRLVLFLGIAALVYHF Sbjct: 316 HPRSFAMAKWWLREVLFDLGEPPPEAMNPGRQRAMVVFAFAVWIYRLVLFLGIAALVYHF 375 Query: 121 FIKAVGILLFIVEMVWFVSLPLWNEMQAWRRRRSAL-RHSRRARCSAVLAVALALLF-LL 178 FIKAVG+LLF VE+ WFV LP+WNE++ W +RR + ++SR R +L + LAL+ ++ Sbjct: 376 FIKAVGVLLFAVEIGWFVFLPIWNEVKEWAKRRDGIFKNSRWKR--PLLGIGLALVVAVI 433 Query: 179 PWPDRIRTSGMLQPQTHMALYAPPQSQVESLPVSNMQQVPAGQTLLGLGSAELDLRTGET 238 PW RI + + L+ P +++E++ V Q V AG LL + ++D R T Sbjct: 434 PWRTRIEAPASVAAEIMAPLFLPAPARLEAVLVERGQHVAAGTKLLAFTAPDIDSRRAIT 493 Query: 239 DARQQSLSWQSAAAGFDAATRKDWQVLNDQLVFSQAEQAAVGADFQRYRPTAPYAGVLVD 298 A+ S + A D R+ L ++L +E+AA+ A+ +R T+P+AG+ +D Sbjct: 494 AAKLAGKSAELEAVKLDPFGRERLSALTEELSRLGSEKAALDAEAERLTITSPHAGIFLD 553 Query: 299 VDPDLRVGQWLTNREYLGSLVAAGKWQVVTYVGEDAVHRIAPGDRALFIADGLGSRTLSL 358 PDL+ G WL+ ++ LG + G YV ED + RI PGD A FI +GL ++ Sbjct: 554 PLPDLKPGAWLSPKQQLGLIRVDGSTIATAYVAEDDLERIKPGDTARFIPNGLDHVGMTG 613 Query: 359 TVASIDRDATRTLGEPELATMFGGDVLAREKSGVIYPEQAVFRVALHVAEPLPAEQQEWR 418 TV +IDR+ + L +P LA++ GGD+ R ++ P+ + FRV + + P + Sbjct: 614 TVLAIDRNPIKVLTDPALASLHGGDIPVRVSGQILVPQGSFFRVTIRLDGTAP--NLKLI 671 Query: 419 GKVTIAGKWEVPALRFLRTAASVAWREAG 447 G V I+G+ + R R+A V RE G Sbjct: 672 GHVQISGQGQSLIGRAARSALVVLVREWG 700 >ref|YP_420506.1| hypothetical protein amb1143 [Magnetospirillum magneticum AMB-1] dbj|BAE49947.1| hypothetical protein [Magnetospirillum magneticum AMB-1] Length = 698 Score = 348 bits (894), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 198/448 (44%), Positives = 269/448 (60%), Gaps = 7/448 (1%) Query: 1 MGIAAWATLAWVWLPEGGIRQAAFLLSTTTWISTLAINASPFMRFDGYYILSDYLGLPNL 60 + +A WATLAW LP+G +R AF L+ TTWIS+LAIN SPFMRFDGY++ D L +PNL Sbjct: 256 LTLAVWATLAWGLLPDGMVRGMAFTLAATTWISSLAINLSPFMRFDGYFLAMDALDMPNL 315 Query: 61 HNRCFALARWDLRERLFALGEPPPEVFPPHRRIGLILFAWTVWIYRLVLFLGIAALVYHF 120 HNR FALARW LRE LF +GE PE FPPH + ++ FAW VWIYRL LFLGIAALVYHF Sbjct: 316 HNRAFALARWHLREVLFRIGEAIPERFPPHIQAAMVGFAWAVWIYRLTLFLGIAALVYHF 375 Query: 121 FIKAVGILLFIVEMVWFVSLPLWNEMQAWRRRRSALRHSRRARCSAVLAVALALLFLLPW 180 FIK VG++LF VEM WFV P + E WR+R A+R ++R+R + L L LL ++PW Sbjct: 376 FIKVVGVILFAVEMGWFVLRPFFVEFGEWRKRAGAIRTTKRSRITFGLFAILILLAIVPW 435 Query: 181 PDRIRTSGMLQPQTHMALYAPPQSQVESLPVSNMQQVPAGQTLLGLGSAELDLRTGETDA 240 R+ ML+ + H+ LYAP + + V+ V G L L + ++ LR + + Sbjct: 436 NGRVAAPAMLKGKDHVTLYAPSPGILSEIAVATGDTVAVGAILARLDNPDMTLRLHQAER 495 Query: 241 RQQSLSWQSAAAGFDAATRKDWQVLNDQLVFSQAEQAAVGADFQRYRPTAPYAGVLVDVD 300 R L ++ A GF+ R + + +L AE+ A+ D R TAP AG +VD+ Sbjct: 496 RIGVLKYELEAVGFEDTFRNRAKAIAQELEAVTAERTALLRDQARLTLTAPIAGSVVDLS 555 Query: 301 PDLRVGQWLTNREYLGSLVAAGKWQVVTYVGEDAVHRIAPGDRALFIADGL-GSRTLSLT 359 P ++ GQWL +E + L A G Q+ YV ED + RI G A FI +G+ G+R + T Sbjct: 556 PMVQTGQWLNPKEPILGLTAGG--QIEAYVAEDDLPRITVGASATFITEGMAGAR--AAT 611 Query: 360 VASIDRDATRTLGEPELATMFGGDVLAREKSGVIYPEQAVFRVALHVAEPLPAEQQEWRG 419 V +IDR A + L +P++ +GG + AR + + P+ AV+RV L V + RG Sbjct: 612 VTAIDRTAVKALTDPQMTVPYGGSIPARFDNKALAPDVAVYRVRLSVGG--ESVSTPLRG 669 Query: 420 KVTIAGKWEVPALRFLRTAASVAWREAG 447 +V I G+ R LR AA+V RE G Sbjct: 670 QVHIDGERRSLLGRVLRGAAAVIIREWG 697