BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0003.0090.p (382 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774454.1| galactonate dehydratase [Herbaspirillum sero... 710 0.0 ref|YP_004355429.1| galactonate dehydratase [Pseudomonas brassic... 704 0.0 ref|YP_274182.1| galactonate dehydratase [Pseudomonas syringae p... 702 0.0 ref|NP_792001.1| mandelate racemase/muconate lactonizing enzyme ... 702 0.0 ref|YP_235070.1| galactonate dehydratase [Pseudomonas syringae p... 702 0.0 >ref|YP_003774454.1| galactonate dehydratase [Herbaspirillum seropedicae SmR1] gb|ADJ62546.1| galactonate dehydratase [Herbaspirillum seropedicae SmR1] Length = 382 Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/382 (91%), Positives = 367/382 (96%) Query: 1 MKITKLTTFIVPPRWCFLKIETDEGIVGWGEPVVEGRAHSVAAAVEELADYLIGKDPRNI 60 MKITK+TTFIVPPRWCFLKIETDEG+VGWGEP+VEGRAHSVAAAVEEL+DYLIGKDPRNI Sbjct: 1 MKITKITTFIVPPRWCFLKIETDEGVVGWGEPIVEGRAHSVAAAVEELSDYLIGKDPRNI 60 Query: 61 EDHWTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKALGLPVNQLLGGPVRDSIRVYSWI 120 EDHWTVLYRGGFYRGGAIHMSALAGIDQALWDIKGK LG+PV+QLLGG VR+SIRVYSWI Sbjct: 61 EDHWTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKDLGVPVHQLLGGAVRNSIRVYSWI 120 Query: 121 GGDRPADTAKAAKDAVARGFTAVKMNGTEELQFIDTYDKVELTLANVAAVREAVGPNVGI 180 GGDRPADTA AAK AVARGFTAVKMNGTEELQFID++DK+ELTLANV AVREAVGPNVGI Sbjct: 121 GGDRPADTAAAAKSAVARGFTAVKMNGTEELQFIDSHDKIELTLANVQAVREAVGPNVGI 180 Query: 181 GVDFHGRVHKPMAKVLVKELEQYKLMFIEEPVLSENYEALKEIAHLTGTPIALGERLYSR 240 GVDFHGRVHKPMAK L+KELE YKLMFIEEPVLSEN EALKEIAHLT TPIALGERLYSR Sbjct: 181 GVDFHGRVHKPMAKALIKELEPYKLMFIEEPVLSENAEALKEIAHLTSTPIALGERLYSR 240 Query: 241 WDFKRILSEGYVDIIQPDVSHAGGITETRKIATMAEAYDVALALHCPLGPIALAACLQVD 300 WDFKRILSEGYVDIIQPDVSHAGGITETRKIA MAEAYDVALALHCPLGPIALA+CLQVD Sbjct: 241 WDFKRILSEGYVDIIQPDVSHAGGITETRKIAMMAEAYDVALALHCPLGPIALASCLQVD 300 Query: 301 AVSYNAFIQEQSLGIHYNESNDLLDYVTDADVFSYKDGYVTIPNGPGLGIEINEEYVRQR 360 A SYNAFIQEQSLGIHYNESNDLLDY+ D +VF+Y+DGYV IP GPGLGIEINEEYVRQR Sbjct: 301 AGSYNAFIQEQSLGIHYNESNDLLDYIRDKNVFAYEDGYVKIPQGPGLGIEINEEYVRQR 360 Query: 361 AEVGHRWRNPIWRHKDGSFAEW 382 AEVGHRWRNPIWRHKDGSFAEW Sbjct: 361 AEVGHRWRNPIWRHKDGSFAEW 382 >ref|YP_004355429.1| galactonate dehydratase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA70425.1| galactonate dehydratase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 382 Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/382 (87%), Positives = 359/382 (93%) Query: 1 MKITKLTTFIVPPRWCFLKIETDEGIVGWGEPVVEGRAHSVAAAVEELADYLIGKDPRNI 60 MKITKLTTFIVPPRWCFLK+ETDEG+ GWGEPVVEGRAH+VAAAVEEL+DYLIGKDPRNI Sbjct: 1 MKITKLTTFIVPPRWCFLKVETDEGVTGWGEPVVEGRAHTVAAAVEELSDYLIGKDPRNI 60 Query: 61 EDHWTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKALGLPVNQLLGGPVRDSIRVYSWI 120 ED WTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKALG+ V+ LLGG VRD IRVYSWI Sbjct: 61 EDIWTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKALGVSVSDLLGGQVRDKIRVYSWI 120 Query: 121 GGDRPADTAKAAKDAVARGFTAVKMNGTEELQFIDTYDKVELTLANVAAVREAVGPNVGI 180 GGDRPADTA+AAK+AVARGFTAVKMNGTEELQF+DT++KV+L LANVAAVR+AVGPNVGI Sbjct: 121 GGDRPADTARAAKEAVARGFTAVKMNGTEELQFLDTFEKVDLALANVAAVRDAVGPNVGI 180 Query: 181 GVDFHGRVHKPMAKVLVKELEQYKLMFIEEPVLSENYEALKEIAHLTGTPIALGERLYSR 240 GVDFHGRVHKPMAKVL+KEL+ YKLMFIEEPVLSENYEALKE+A LT TPIALGERL+SR Sbjct: 181 GVDFHGRVHKPMAKVLMKELDPYKLMFIEEPVLSENYEALKELAPLTSTPIALGERLFSR 240 Query: 241 WDFKRILSEGYVDIIQPDVSHAGGITETRKIATMAEAYDVALALHCPLGPIALAACLQVD 300 WDFKR+LSEGYVDIIQPD SHAGGITETRKIA MAEAYDVALALHCPLGPIALAACLQ+D Sbjct: 241 WDFKRVLSEGYVDIIQPDASHAGGITETRKIANMAEAYDVALALHCPLGPIALAACLQLD 300 Query: 301 AVSYNAFIQEQSLGIHYNESNDLLDYVTDADVFSYKDGYVTIPNGPGLGIEINEEYVRQR 360 AV YNAFIQEQSLGIHYNESNDLLDY+ D VF Y G+V IPNGPGLGIEINEEYV +R Sbjct: 301 AVCYNAFIQEQSLGIHYNESNDLLDYIKDPQVFDYDKGFVKIPNGPGLGIEINEEYVIER 360 Query: 361 AEVGHRWRNPIWRHKDGSFAEW 382 A +GHRWRNPIWRH DGSFAEW Sbjct: 361 AAIGHRWRNPIWRHADGSFAEW 382 >ref|YP_274182.1| galactonate dehydratase [Pseudomonas syringae pv. phaseolicola 1448A] ref|ZP_05639538.1| galactonate dehydratase [Pseudomonas syringae pv. tabaci ATCC 11528] ref|ZP_06478007.1| galactonate dehydratase [Pseudomonas syringae pv. aesculi str. 2250] gb|AAZ33712.1| galactonate dehydratase [Pseudomonas syringae pv. phaseolicola 1448A] gb|EFW85238.1| galactonate dehydratase [Pseudomonas syringae pv. glycinea str. race 4] gb|EGH90732.1| galactonate dehydratase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 382 Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/382 (88%), Positives = 358/382 (93%) Query: 1 MKITKLTTFIVPPRWCFLKIETDEGIVGWGEPVVEGRAHSVAAAVEELADYLIGKDPRNI 60 MKITKLTTFIVPPRWCFLK+ETDEG+VGWGEPVVEGRAH+VAAAVEEL+DYLIGKDPRNI Sbjct: 1 MKITKLTTFIVPPRWCFLKVETDEGVVGWGEPVVEGRAHTVAAAVEELSDYLIGKDPRNI 60 Query: 61 EDHWTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKALGLPVNQLLGGPVRDSIRVYSWI 120 ED WTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKALG+ V+ LLGG VRD IRVYSWI Sbjct: 61 EDIWTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKALGVSVSDLLGGQVRDKIRVYSWI 120 Query: 121 GGDRPADTAKAAKDAVARGFTAVKMNGTEELQFIDTYDKVELTLANVAAVREAVGPNVGI 180 GGDRPADTA+AAK+AV RGFTAVKMNGTEELQF+DT+DKV+L LANVAAVR+AVGPNVGI Sbjct: 121 GGDRPADTARAAKEAVGRGFTAVKMNGTEELQFLDTFDKVDLALANVAAVRDAVGPNVGI 180 Query: 181 GVDFHGRVHKPMAKVLVKELEQYKLMFIEEPVLSENYEALKEIAHLTGTPIALGERLYSR 240 GVDFHGRVHKPMAKVL+KEL+ YKLMFIEEPVLSENYEALKE+A LT TPIALGERL+SR Sbjct: 181 GVDFHGRVHKPMAKVLMKELDAYKLMFIEEPVLSENYEALKELAPLTSTPIALGERLFSR 240 Query: 241 WDFKRILSEGYVDIIQPDVSHAGGITETRKIATMAEAYDVALALHCPLGPIALAACLQVD 300 WDFKR+LSEGYVDIIQPD SHAGGITETRKIA MAEAYDVALALHCPLGPIALAACLQ+D Sbjct: 241 WDFKRVLSEGYVDIIQPDASHAGGITETRKIANMAEAYDVALALHCPLGPIALAACLQLD 300 Query: 301 AVSYNAFIQEQSLGIHYNESNDLLDYVTDADVFSYKDGYVTIPNGPGLGIEINEEYVRQR 360 AV YNAFIQEQSLGIHYNESNDLLDYV +VF Y G V IPNGPGLGIEINEEYV +R Sbjct: 301 AVCYNAFIQEQSLGIHYNESNDLLDYVKHPEVFDYDKGMVKIPNGPGLGIEINEEYVIER 360 Query: 361 AEVGHRWRNPIWRHKDGSFAEW 382 A +GHRWRNPIWRH DGSFAEW Sbjct: 361 AAIGHRWRNPIWRHADGSFAEW 382 >ref|NP_792001.1| mandelate racemase/muconate lactonizing enzyme family protein [Pseudomonas syringae pv. tomato str. DC3000] ref|ZP_03396349.1| mandelate racemase/muconate lactonizing enzyme family protein [Pseudomonas syringae pv. tomato T1] ref|ZP_07232209.1| galactonate dehydratase [Pseudomonas syringae pv. tomato Max13] ref|ZP_07252308.1| galactonate dehydratase [Pseudomonas syringae pv. tomato K40] ref|ZP_07257856.1| galactonate dehydratase [Pseudomonas syringae pv. tomato NCPPB 1108] gb|AAO55696.1| mandelate racemase/muconate lactonizing enzyme family protein [Pseudomonas syringae pv. tomato str. DC3000] gb|EEB60734.1| mandelate racemase/muconate lactonizing enzyme family protein [Pseudomonas syringae pv. tomato T1] gb|EGH98674.1| galactonate dehydratase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 382 Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/382 (88%), Positives = 358/382 (93%) Query: 1 MKITKLTTFIVPPRWCFLKIETDEGIVGWGEPVVEGRAHSVAAAVEELADYLIGKDPRNI 60 MKITKLTTFIVPPRWCFLK+ETDEG+VGWGEPVVEGRAH+VAAAVEEL+DYLIGKDPRNI Sbjct: 1 MKITKLTTFIVPPRWCFLKVETDEGVVGWGEPVVEGRAHTVAAAVEELSDYLIGKDPRNI 60 Query: 61 EDHWTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKALGLPVNQLLGGPVRDSIRVYSWI 120 ED WTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKALG+ V+ LLGG VRD IRVYSWI Sbjct: 61 EDIWTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKALGVSVSDLLGGQVRDKIRVYSWI 120 Query: 121 GGDRPADTAKAAKDAVARGFTAVKMNGTEELQFIDTYDKVELTLANVAAVREAVGPNVGI 180 GGDRPADTA+AAK+AV RGFTAVKMNGTEELQF+DT+DKV+L LANVAAVR+AVGPNVGI Sbjct: 121 GGDRPADTARAAKEAVERGFTAVKMNGTEELQFLDTFDKVDLALANVAAVRDAVGPNVGI 180 Query: 181 GVDFHGRVHKPMAKVLVKELEQYKLMFIEEPVLSENYEALKEIAHLTGTPIALGERLYSR 240 GVDFHGRVHKPMAKVL+KEL+ YKLMFIEEPVLSENYEALKE+A LT TPIALGERL+SR Sbjct: 181 GVDFHGRVHKPMAKVLMKELDAYKLMFIEEPVLSENYEALKELAPLTSTPIALGERLFSR 240 Query: 241 WDFKRILSEGYVDIIQPDVSHAGGITETRKIATMAEAYDVALALHCPLGPIALAACLQVD 300 WDFKR+LSEGYVDIIQPD SHAGGITETRKIA MAEAYDVALALHCPLGPIALAACLQ+D Sbjct: 241 WDFKRVLSEGYVDIIQPDASHAGGITETRKIANMAEAYDVALALHCPLGPIALAACLQLD 300 Query: 301 AVSYNAFIQEQSLGIHYNESNDLLDYVTDADVFSYKDGYVTIPNGPGLGIEINEEYVRQR 360 AV YNAFIQEQSLGIHYNESNDLLDYV +VF Y G V IPNGPGLGIEINEEYV +R Sbjct: 301 AVCYNAFIQEQSLGIHYNESNDLLDYVKHPEVFDYDKGMVKIPNGPGLGIEINEEYVIER 360 Query: 361 AEVGHRWRNPIWRHKDGSFAEW 382 A +GHRWRNPIWRH DGSFAEW Sbjct: 361 AAIGHRWRNPIWRHADGSFAEW 382 >ref|YP_235070.1| galactonate dehydratase [Pseudomonas syringae pv. syringae B728a] gb|AAY37032.1| galactonate dehydratase [Pseudomonas syringae pv. syringae B728a] Length = 401 Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/382 (88%), Positives = 358/382 (93%) Query: 1 MKITKLTTFIVPPRWCFLKIETDEGIVGWGEPVVEGRAHSVAAAVEELADYLIGKDPRNI 60 MKITKLTTFIVPPRWCFLK+ETDEG+VGWGEPVVEGRAH+VAAAVEEL+DYLIGKDPRNI Sbjct: 20 MKITKLTTFIVPPRWCFLKVETDEGVVGWGEPVVEGRAHTVAAAVEELSDYLIGKDPRNI 79 Query: 61 EDHWTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKALGLPVNQLLGGPVRDSIRVYSWI 120 ED WTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKALG+ V+ LLGG VRD IRVYSWI Sbjct: 80 EDIWTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKALGVSVSDLLGGQVRDKIRVYSWI 139 Query: 121 GGDRPADTAKAAKDAVARGFTAVKMNGTEELQFIDTYDKVELTLANVAAVREAVGPNVGI 180 GGDRPADTA+AAK+AV RGFTAVKMNGTEELQF+DT+DKV+L LANVAAVR+AVGPNVGI Sbjct: 140 GGDRPADTARAAKEAVERGFTAVKMNGTEELQFLDTFDKVDLALANVAAVRDAVGPNVGI 199 Query: 181 GVDFHGRVHKPMAKVLVKELEQYKLMFIEEPVLSENYEALKEIAHLTGTPIALGERLYSR 240 GVDFHGRVHKPMAKVL+KEL+ YKLMFIEEPVLSENYEALKE+A LT TPIALGERL+SR Sbjct: 200 GVDFHGRVHKPMAKVLMKELDPYKLMFIEEPVLSENYEALKELAPLTSTPIALGERLFSR 259 Query: 241 WDFKRILSEGYVDIIQPDVSHAGGITETRKIATMAEAYDVALALHCPLGPIALAACLQVD 300 WDFKR+LSEGYVDIIQPD SHAGGITETRKIA MAEAYDVALALHCPLGPIALAACLQ+D Sbjct: 260 WDFKRVLSEGYVDIIQPDASHAGGITETRKIANMAEAYDVALALHCPLGPIALAACLQLD 319 Query: 301 AVSYNAFIQEQSLGIHYNESNDLLDYVTDADVFSYKDGYVTIPNGPGLGIEINEEYVRQR 360 AV YNAFIQEQSLGIHYNESNDLLDYV +VF Y G V IPNGPGLGIEINEEYV +R Sbjct: 320 AVCYNAFIQEQSLGIHYNESNDLLDYVKHPEVFDYDKGMVKIPNGPGLGIEINEEYVIER 379 Query: 361 AEVGHRWRNPIWRHKDGSFAEW 382 A +GHRWRNPIWRH DGSFAEW Sbjct: 380 AAIGHRWRNPIWRHADGSFAEW 401