BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0003.0089.p (233 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774455.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldol... 291 8e-77 ref|YP_002869728.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldol... 289 2e-76 ref|ZP_07772657.1| 2-dehydro-3-deoxyphosphogluconate aldolase [P... 286 2e-75 ref|ZP_04589590.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldola... 286 2e-75 ref|YP_004754635.1| 2-dehydro-3-deoxyphosphogalactonate aldolase... 285 3e-75 >ref|YP_003774455.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Herbaspirillum seropedicae SmR1] gb|ADJ62547.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase protein [Herbaspirillum seropedicae SmR1] Length = 212 Score = 291 bits (744), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 147/202 (72%), Positives = 167/202 (82%) Query: 22 FQNALQHCGLIAILRGVRPDEVEAIGKALYEAGFRVIEVPLNSPEPLQSIATLRRTLPAD 81 F +AL+ G+IAILRGVR E EAIG ALYE+GFR+IEVPLNSPEPL SI LR++LPAD Sbjct: 8 FHDALRSTGMIAILRGVRNAEAEAIGAALYESGFRIIEVPLNSPEPLLSITALRKSLPAD 67 Query: 82 CVIGAGTVLSPEQVAQVKAAGGELIVMPHSDARVIHAAKEAGLCSAPGVATVTEAFAALA 141 C++GAGTVL P QV QVK AGGELIVMPHSD VI AA++AGL SAPGVATVTEAFAAL Sbjct: 68 CIVGAGTVLKPAQVEQVKDAGGELIVMPHSDGAVIRAARDAGLYSAPGVATVTEAFAALD 127 Query: 142 AGADVLKMFPAEQLGTHVVKAWRAVIPASVALLPVGGIMPSSVSVFVDAGASGFGLGSAL 201 GADVLKMFPAEQLG VVKAWRAVI +ALLPVGGI P ++VF AGASGFGLGSAL Sbjct: 128 NGADVLKMFPAEQLGPQVVKAWRAVIARDIALLPVGGITPEGMAVFHAAGASGFGLGSAL 187 Query: 202 FKPGMSAATVGENAKAFVSAWQ 223 + PG+SA V + A+AFV+AW+ Sbjct: 188 YTPGLSAEQVRQRAEAFVAAWK 209 >ref|YP_002869728.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Pseudomonas fluorescens SBW25] emb|CAY46316.1| putative 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Pseudomonas fluorescens SBW25] Length = 206 Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 141/203 (69%), Positives = 167/203 (82%) Query: 21 LFQNALQHCGLIAILRGVRPDEVEAIGKALYEAGFRVIEVPLNSPEPLQSIATLRRTLPA 80 + + AL GLIAILRG+RPDE EA+G+ LY+AGFRVIEVPLNSP+P SI TLR +LPA Sbjct: 1 MLKQALAQNGLIAILRGIRPDEAEAVGQVLYQAGFRVIEVPLNSPDPYTSIRTLRDSLPA 60 Query: 81 DCVIGAGTVLSPEQVAQVKAAGGELIVMPHSDARVIHAAKEAGLCSAPGVATVTEAFAAL 140 DC+IGAGTVL PEQV QVKAAGG++IVMPHSDA+V+ AAK AGL +PGVAT TEAFAAL Sbjct: 61 DCLIGAGTVLLPEQVEQVKAAGGQVIVMPHSDAKVLRAAKAAGLYLSPGVATPTEAFAAL 120 Query: 141 AAGADVLKMFPAEQLGTHVVKAWRAVIPASVALLPVGGIMPSSVSVFVDAGASGFGLGSA 200 A GADVLK+FPAEQ+G V+KAW AV+PA LLPVGGI P ++ VF+DAGA GFGLGS Sbjct: 121 AEGADVLKLFPAEQMGPAVIKAWLAVLPAGTLLLPVGGITPDNMQVFIDAGAKGFGLGSG 180 Query: 201 LFKPGMSAATVGENAKAFVSAWQ 223 LFKPGM+ V A+A+V+AW+ Sbjct: 181 LFKPGMTVDQVASRAQAYVAAWK 203 >ref|ZP_07772657.1| 2-dehydro-3-deoxyphosphogluconate aldolase [Pseudomonas fluorescens WH6] gb|EFQ66123.1| 2-dehydro-3-deoxyphosphogluconate aldolase [Pseudomonas fluorescens WH6] Length = 206 Score = 286 bits (732), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 139/203 (68%), Positives = 166/203 (81%) Query: 21 LFQNALQHCGLIAILRGVRPDEVEAIGKALYEAGFRVIEVPLNSPEPLQSIATLRRTLPA 80 + + AL GLIAILRGVRPDE +A+G+ LY+AGFRVIEVPLNSP+P SI TLR +LPA Sbjct: 1 MLKQALAQNGLIAILRGVRPDEAKAVGQVLYDAGFRVIEVPLNSPDPYTSIRTLRDSLPA 60 Query: 81 DCVIGAGTVLSPEQVAQVKAAGGELIVMPHSDARVIHAAKEAGLCSAPGVATVTEAFAAL 140 DC+IGAGTVL+PEQV QVKAAGG++IVMPHSDA+V+ AAK AGL +PGVAT TEAFAAL Sbjct: 61 DCLIGAGTVLTPEQVEQVKAAGGQVIVMPHSDAKVLRAAKAAGLYLSPGVATPTEAFAAL 120 Query: 141 AAGADVLKMFPAEQLGTHVVKAWRAVIPASVALLPVGGIMPSSVSVFVDAGASGFGLGSA 200 A GADVLK+FPAEQ+G V+KAW AV+P LLPVGGI P ++ VF DAGA GFGLGS Sbjct: 121 AEGADVLKLFPAEQMGPAVIKAWLAVLPQGTLLLPVGGINPDNMQVFTDAGAKGFGLGSG 180 Query: 201 LFKPGMSAATVGENAKAFVSAWQ 223 LFKPGM+ + A+A+V+AW+ Sbjct: 181 LFKPGMTVDQIASRAQAYVAAWK 203 >ref|ZP_04589590.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Pseudomonas syringae pv. oryzae str. 1_6] gb|EGI04043.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 211 Score = 286 bits (731), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 141/206 (68%), Positives = 166/206 (80%) Query: 21 LFQNALQHCGLIAILRGVRPDEVEAIGKALYEAGFRVIEVPLNSPEPLQSIATLRRTLPA 80 + + AL+ GL+AILRG+RP+E A+G LYEAGFRVIEVPLNSP+P SI LR+ LPA Sbjct: 1 MLKQALKENGLVAILRGLRPEEAPAVGDVLYEAGFRVIEVPLNSPQPFDSIRLLRQQLPA 60 Query: 81 DCVIGAGTVLSPEQVAQVKAAGGELIVMPHSDARVIHAAKEAGLCSAPGVATVTEAFAAL 140 DC+IGAGTVL+PEQV QVK AGG++IVMPHSDARV+ AAK AGL +PGVAT TEAFAAL Sbjct: 61 DCLIGAGTVLNPEQVTQVKDAGGQVIVMPHSDARVLRAAKAAGLFLSPGVATPTEAFAAL 120 Query: 141 AAGADVLKMFPAEQLGTHVVKAWRAVIPASVALLPVGGIMPSSVSVFVDAGASGFGLGSA 200 A GADVLK+FPAEQ+ VVKAW AV+P LLPVGGI P ++ VF+DAG GFGLGS Sbjct: 121 AEGADVLKLFPAEQMSPAVVKAWLAVLPKGTILLPVGGISPDNMKVFLDAGVKGFGLGSG 180 Query: 201 LFKPGMSAATVGENAKAFVSAWQTRN 226 LFKPGMSAA V E AKA+V+AW+ + Sbjct: 181 LFKPGMSAADVAERAKAYVAAWKQHS 206 >ref|YP_004754635.1| 2-dehydro-3-deoxyphosphogalactonate aldolase [Collimonas fungivorans Ter331] gb|AAT42428.1| 2-keto-3-deoxy-6-phosphogluconate aldolase [Collimonas fungivorans Ter331] gb|AEK63812.1| 2-dehydro-3-deoxyphosphogalactonate aldolase [Collimonas fungivorans Ter331] Length = 222 Score = 285 bits (730), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 150/202 (74%), Positives = 171/202 (84%) Query: 21 LFQNALQHCGLIAILRGVRPDEVEAIGKALYEAGFRVIEVPLNSPEPLQSIATLRRTLPA 80 + +NA++ CGLIAILRGV P EV AIG LYEAGFR+IEVPLNSP+P SI +LR LPA Sbjct: 1 MLRNAMKQCGLIAILRGVEPHEVAAIGLKLYEAGFRIIEVPLNSPQPFDSIRSLRNALPA 60 Query: 81 DCVIGAGTVLSPEQVAQVKAAGGELIVMPHSDARVIHAAKEAGLCSAPGVATVTEAFAAL 140 DC++GAGTVL+ +QVA VK AGGE+IVMPHSD VI AAK+AGL APGVATVTEAFAAL Sbjct: 61 DCLVGAGTVLTTDQVAAVKRAGGEIIVMPHSDPEVIAAAKQAGLACAPGVATVTEAFAAL 120 Query: 141 AAGADVLKMFPAEQLGTHVVKAWRAVIPASVALLPVGGIMPSSVSVFVDAGASGFGLGSA 200 AAGADVLKMFPAEQLG +VVKAWRAVIP VALLPVGGI P +++ FV AGASGFGLGSA Sbjct: 121 AAGADVLKMFPAEQLGPNVVKAWRAVIPREVALLPVGGITPENLATFVSAGASGFGLGSA 180 Query: 201 LFKPGMSAATVGENAKAFVSAW 222 L+KPG+SA VG+NA FV+AW Sbjct: 181 LYKPGLSADQVGQNANRFVAAW 202