BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0003.0076.p         (159 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774465.1| dihydroxyacid dehydratase/phosphogluconate d...   263   5e-69
ref|YP_521739.1| dihydroxy-acid dehydratase [Rhodoferax ferrired...   259   7e-68
ref|ZP_08142491.1| dihydroxy-acid dehydratase [Pseudomonas sp. T...   255   2e-66
ref|YP_001748864.1| dihydroxy-acid dehydratase [Pseudomonas puti...   255   2e-66
ref|YP_004701490.1| dihydroxy-acid dehydratase [Pseudomonas puti...   254   3e-66

>ref|YP_003774465.1| dihydroxyacid dehydratase/phosphogluconate dehydratase
           [Herbaspirillum seropedicae SmR1]
 gb|ADJ62557.1| dihydroxyacid dehydratase/phosphogluconate dehydratase protein
           [Herbaspirillum seropedicae SmR1]
          Length = 585

 Score =  263 bits (673), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 120/125 (96%), Positives = 122/125 (97%)

Query: 4   DKKRTLRSAAWFGTADKNGFMYRSWMKNQGIPDHEFQGKPVIGICNTWSELTPCNAHFRK 63
           DK RTLRSA WFGTADKNGFMYRSWMKNQGIPDHEFQGKPVIGICNTWSELTPCNAHFRK
Sbjct: 7   DKSRTLRSAGWFGTADKNGFMYRSWMKNQGIPDHEFQGKPVIGICNTWSELTPCNAHFRK 66

Query: 64  IAEHVKRGIIEAGGFPVEFPVFSNGESNLRPTAMLTRNLASMDVEESIRGNPLDAVVLLV 123
           IAEHV+RGIIEAGGFPVEFPVFSNGESNLRPTAMLTRNLASMDVEESIRGNP+DAVVLL 
Sbjct: 67  IAEHVRRGIIEAGGFPVEFPVFSNGESNLRPTAMLTRNLASMDVEESIRGNPIDAVVLLT 126

Query: 124 GCDKT 128
           GCDKT
Sbjct: 127 GCDKT 131


>ref|YP_521739.1| dihydroxy-acid dehydratase [Rhodoferax ferrireducens T118]
 gb|ABD68208.1| L-arabinonate dehydratase [Rhodoferax ferrireducens T118]
          Length = 579

 Score =  259 bits (663), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 119/128 (92%), Positives = 122/128 (95%)

Query: 1   MTIDKKRTLRSAAWFGTADKNGFMYRSWMKNQGIPDHEFQGKPVIGICNTWSELTPCNAH 60
           M+   KR LRSAAWFG ADKNGFMYRSWMKNQGIPDHEFQGKP+IGICNTWSELTPCNAH
Sbjct: 1   MSTPPKRVLRSAAWFGAADKNGFMYRSWMKNQGIPDHEFQGKPIIGICNTWSELTPCNAH 60

Query: 61  FRKIAEHVKRGIIEAGGFPVEFPVFSNGESNLRPTAMLTRNLASMDVEESIRGNPLDAVV 120
           FRKIAEHVKRGI EAGGFPVEFPVFSNGESNLRPTAMLTRNLASMDVEESIRGNP+DAVV
Sbjct: 61  FRKIAEHVKRGISEAGGFPVEFPVFSNGESNLRPTAMLTRNLASMDVEESIRGNPMDAVV 120

Query: 121 LLVGCDKT 128
           LLVGCDKT
Sbjct: 121 LLVGCDKT 128


>ref|ZP_08142491.1| dihydroxy-acid dehydratase [Pseudomonas sp. TJI-51]
 gb|EGB96222.1| dihydroxy-acid dehydratase [Pseudomonas sp. TJI-51]
          Length = 577

 Score =  255 bits (651), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 114/125 (91%), Positives = 121/125 (96%)

Query: 4   DKKRTLRSAAWFGTADKNGFMYRSWMKNQGIPDHEFQGKPVIGICNTWSELTPCNAHFRK 63
           D KR LRSA WFGTADKNGFMYRSWMKNQGIPDHEFQGKP+IGICNTWSELTPCNAHFRK
Sbjct: 3   DAKRPLRSAQWFGTADKNGFMYRSWMKNQGIPDHEFQGKPIIGICNTWSELTPCNAHFRK 62

Query: 64  IAEHVKRGIIEAGGFPVEFPVFSNGESNLRPTAMLTRNLASMDVEESIRGNPLDAVVLLV 123
           IAEHVK+G++EAGGFPVEFPVFS+GESNLRPTAMLTRNLASMDVEE+IRGNP+DAVVLL 
Sbjct: 63  IAEHVKKGVLEAGGFPVEFPVFSSGESNLRPTAMLTRNLASMDVEEAIRGNPVDAVVLLT 122

Query: 124 GCDKT 128
           GCDKT
Sbjct: 123 GCDKT 127


>ref|YP_001748864.1| dihydroxy-acid dehydratase [Pseudomonas putida W619]
 gb|ACA72495.1| Dihydroxy-acid dehydratase [Pseudomonas putida W619]
          Length = 577

 Score =  255 bits (651), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 114/125 (91%), Positives = 121/125 (96%)

Query: 4   DKKRTLRSAAWFGTADKNGFMYRSWMKNQGIPDHEFQGKPVIGICNTWSELTPCNAHFRK 63
           D KR LRSA WFGTADKNGFMYRSWMKNQGIPDHEFQGKP+IGICNTWSELTPCNAHFRK
Sbjct: 3   DNKRPLRSAQWFGTADKNGFMYRSWMKNQGIPDHEFQGKPIIGICNTWSELTPCNAHFRK 62

Query: 64  IAEHVKRGIIEAGGFPVEFPVFSNGESNLRPTAMLTRNLASMDVEESIRGNPLDAVVLLV 123
           IAEHVK+G++EAGGFPVEFPVFS+GESNLRPTAMLTRNLASMDVEE+IRGNP+DAVVLL 
Sbjct: 63  IAEHVKKGVLEAGGFPVEFPVFSSGESNLRPTAMLTRNLASMDVEEAIRGNPVDAVVLLT 122

Query: 124 GCDKT 128
           GCDKT
Sbjct: 123 GCDKT 127


>ref|YP_004701490.1| dihydroxy-acid dehydratase [Pseudomonas putida S16]
 gb|AEJ12610.1| dihydroxy-acid dehydratase [Pseudomonas putida S16]
          Length = 577

 Score =  254 bits (650), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 114/125 (91%), Positives = 121/125 (96%)

Query: 4   DKKRTLRSAAWFGTADKNGFMYRSWMKNQGIPDHEFQGKPVIGICNTWSELTPCNAHFRK 63
           D KR LRSA WFGTADKNGFMYRSWMKNQGIPDHEFQGKP+IGICNTWSELTPCNAHFRK
Sbjct: 3   DSKRPLRSAQWFGTADKNGFMYRSWMKNQGIPDHEFQGKPIIGICNTWSELTPCNAHFRK 62

Query: 64  IAEHVKRGIIEAGGFPVEFPVFSNGESNLRPTAMLTRNLASMDVEESIRGNPLDAVVLLV 123
           IAEHVK+G++EAGGFPVEFPVFS+GESNLRPTAMLTRNLASMDVEE+IRGNP+DAVVLL 
Sbjct: 63  IAEHVKKGVLEAGGFPVEFPVFSSGESNLRPTAMLTRNLASMDVEEAIRGNPVDAVVLLT 122

Query: 124 GCDKT 128
           GCDKT
Sbjct: 123 GCDKT 127