BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0003.0075.p (201 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004751961.1| dihydroxy-acid dehydratase [Collimonas fungi... 333 6e-90 ref|YP_003774465.1| dihydroxyacid dehydratase/phosphogluconate d... 329 1e-88 ref|YP_982889.1| dihydroxy-acid dehydratase [Polaromonas naphtha... 305 2e-81 ref|YP_002942968.1| dihydroxy-acid dehydratase [Variovorax parad... 304 6e-81 ref|YP_004153449.1| dihydroxy-acid dehydratase [Variovorax parad... 301 3e-80 >ref|YP_004751961.1| dihydroxy-acid dehydratase [Collimonas fungivorans Ter331] gb|AEK61138.1| Dihydroxy-acid dehydratase [Collimonas fungivorans Ter331] Length = 587 Score = 333 bits (855), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 165/201 (82%), Positives = 173/201 (86%), Gaps = 13/201 (6%) Query: 1 VLKPSAASPELMKHRGKAVVFEDFAHYKERINDPDLDVDASSVLVMKNCGPKGYPGMAEV 60 VLKPSAA+P LM+HRGKAVVFEDFAHYK RINDP+LDVDASSVLVMKNCGPKGYPGMAEV Sbjct: 400 VLKPSAATPALMQHRGKAVVFEDFAHYKARINDPELDVDASSVLVMKNCGPKGYPGMAEV 459 Query: 61 GNMGLPPKLLAQGVKDMVRISDARMSGTAYGTVVLHVAPEAAAGGPLGIVQDGDWIEMDC 120 GNMGLPPKLLAQG+KDMVRISDARMSGTAYGTVVLHVAPEAAAGGPLGIVQDGDWIE+DC Sbjct: 460 GNMGLPPKLLAQGIKDMVRISDARMSGTAYGTVVLHVAPEAAAGGPLGIVQDGDWIELDC 519 Query: 121 AAGRLHLDISDEEMAQRQTARAEKLAQAKPAMQGGYQSLYIDRVLQADEGCDFDFLVGCR 180 A GRLHLDISD EMAQRQ AR E + A GYQ LYIDRVLQADEGCDFDFLVGCR Sbjct: 520 AGGRLHLDISDAEMAQRQVAR-EAVNAAAVTAHSGYQRLYIDRVLQADEGCDFDFLVGCR 578 Query: 181 GAXGCDFDFLVGCAAIPKHSH 201 G +A+PKHSH Sbjct: 579 G------------SAVPKHSH 587 >ref|YP_003774465.1| dihydroxyacid dehydratase/phosphogluconate dehydratase [Herbaspirillum seropedicae SmR1] gb|ADJ62557.1| dihydroxyacid dehydratase/phosphogluconate dehydratase protein [Herbaspirillum seropedicae SmR1] Length = 585 Score = 329 bits (844), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 162/201 (80%), Positives = 175/201 (87%), Gaps = 12/201 (5%) Query: 1 VLKPSAASPELMKHRGKAVVFEDFAHYKERINDPDLDVDASSVLVMKNCGPKGYPGMAEV 60 VLKPSAA+PELMKHRG+AVVFEDF HYKERINDPDLDVDAS VLVMKN GPKGYPGMAEV Sbjct: 397 VLKPSAATPELMKHRGRAVVFEDFNHYKERINDPDLDVDASCVLVMKNVGPKGYPGMAEV 456 Query: 61 GNMGLPPKLLAQGVKDMVRISDARMSGTAYGTVVLHVAPEAAAGGPLGIVQDGDWIEMDC 120 GNMGLPPK+LA GVKDMVRISDARMSGTAYGTV+LHVAPEAAAGGPLGIVQDGD+IE+D Sbjct: 457 GNMGLPPKVLATGVKDMVRISDARMSGTAYGTVILHVAPEAAAGGPLGIVQDGDFIELDA 516 Query: 121 AAGRLHLDISDEEMAQRQTARAEKLAQAKPAMQGGYQSLYIDRVLQADEGCDFDFLVGCR 180 AG+L LDIS+EEM +R ARA+ LA+ KP M GGYQSLY+DRVLQADEGCDFDFLVGCR Sbjct: 517 YAGKLQLDISEEEMKRRLEARAKVLAERKPEMVGGYQSLYVDRVLQADEGCDFDFLVGCR 576 Query: 181 GAXGCDFDFLVGCAAIPKHSH 201 G AA+PKHSH Sbjct: 577 G------------AAVPKHSH 585 >ref|YP_982889.1| dihydroxy-acid dehydratase [Polaromonas naphthalenivorans CJ2] gb|ABM37968.1| L-arabinonate dehydratase [Polaromonas naphthalenivorans CJ2] Length = 579 Score = 305 bits (781), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 152/202 (75%), Positives = 167/202 (82%), Gaps = 17/202 (8%) Query: 1 VLKPSAASPELMKHRGKAVVFEDFAHYKERINDPDLDVDASSVLVMKNCGPKGYPGMAEV 60 VLKPSAASP LM+HRG+AVVFEDF HYK RINDPDL+VDA+SVL+MKNCGPKGYPGMAEV Sbjct: 394 VLKPSAASPHLMQHRGQAVVFEDFDHYKSRINDPDLEVDANSVLLMKNCGPKGYPGMAEV 453 Query: 61 GNMGLPPKLLAQGVKDMVRISDARMSGTAYGTVVLHVAPEAAAGGPLGIVQDGDWIEMDC 120 GNMGLPPKLLAQGV DMVRISDARMSGTAYGTVVLHVAPEAAAGGPL IV+DGDWIE+DC Sbjct: 454 GNMGLPPKLLAQGVTDMVRISDARMSGTAYGTVVLHVAPEAAAGGPLAIVRDGDWIELDC 513 Query: 121 AAGRLHLDISDEEMAQRQTARAEKL-AQAKPAMQGGYQSLYIDRVLQADEGCDFDFLVGC 179 A GRLHL+I + EMA AR E L A+ P GGY+ LYID VLQAD+GCDFDFL+GC Sbjct: 514 AGGRLHLEIDEAEMA----ARFENLQARKPPERTGGYRELYIDHVLQADQGCDFDFLLGC 569 Query: 180 RGAXGCDFDFLVGCAAIPKHSH 201 RGA +P+HSH Sbjct: 570 RGAE------------VPRHSH 579 >ref|YP_002942968.1| dihydroxy-acid dehydratase [Variovorax paradoxus S110] gb|ACS17702.1| Dihydroxy-acid dehydratase [Variovorax paradoxus S110] Length = 583 Score = 304 bits (778), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 148/201 (73%), Positives = 163/201 (81%), Gaps = 12/201 (5%) Query: 1 VLKPSAASPELMKHRGKAVVFEDFAHYKERINDPDLDVDASSVLVMKNCGPKGYPGMAEV 60 VLKPSAASPEL+KHRG+AVVFE+ HYKERI D L++DASSV+VMKNCGPKGYPGMAEV Sbjct: 395 VLKPSAASPELLKHRGRAVVFENLEHYKERIVDESLEIDASSVMVMKNCGPKGYPGMAEV 454 Query: 61 GNMGLPPKLLAQGVKDMVRISDARMSGTAYGTVVLHVAPEAAAGGPLGIVQDGDWIEMDC 120 GNMGLPPKLL QGVKDMVRISDARMSGTAYGTVVLHVAPEAA GGPL V+DGDWIE+DC Sbjct: 455 GNMGLPPKLLRQGVKDMVRISDARMSGTAYGTVVLHVAPEAADGGPLAAVRDGDWIELDC 514 Query: 121 AAGRLHLDISDEEMAQRQTARAEKLAQAKPAMQGGYQSLYIDRVLQADEGCDFDFLVGCR 180 AGRLHLDISDEE+A R + AQ GGYQ LY++ VLQADEGCDFDFLVGCR Sbjct: 515 DAGRLHLDISDEELAARLASLTSTDAQPMSTRGGGYQKLYVNHVLQADEGCDFDFLVGCR 574 Query: 181 GAXGCDFDFLVGCAAIPKHSH 201 G +A+P+HSH Sbjct: 575 G------------SAVPRHSH 583 >ref|YP_004153449.1| dihydroxy-acid dehydratase [Variovorax paradoxus EPS] gb|ADU35338.1| Dihydroxy-acid dehydratase [Variovorax paradoxus EPS] Length = 582 Score = 301 bits (771), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 146/201 (72%), Positives = 163/201 (81%), Gaps = 12/201 (5%) Query: 1 VLKPSAASPELMKHRGKAVVFEDFAHYKERINDPDLDVDASSVLVMKNCGPKGYPGMAEV 60 VLKPSAA+PEL+KHRG+AVVFE+ HYKERI D LD+DAS V+V+KNCGPKGYPGMAEV Sbjct: 394 VLKPSAATPELLKHRGRAVVFENLEHYKERIVDESLDIDASCVMVLKNCGPKGYPGMAEV 453 Query: 61 GNMGLPPKLLAQGVKDMVRISDARMSGTAYGTVVLHVAPEAAAGGPLGIVQDGDWIEMDC 120 GNMGLPPKLL QGVKDMVRISDARMSGTAYGTVVLHVAPEAA GGPL V+DGDWIE+DC Sbjct: 454 GNMGLPPKLLRQGVKDMVRISDARMSGTAYGTVVLHVAPEAADGGPLAAVRDGDWIELDC 513 Query: 121 AAGRLHLDISDEEMAQRQTARAEKLAQAKPAMQGGYQSLYIDRVLQADEGCDFDFLVGCR 180 AGRLHLDISDEE+A R + + AQ GGYQ LY++ VLQADEGCDFDFLVGCR Sbjct: 514 DAGRLHLDISDEELASRLASLSASDAQPMSTRGGGYQKLYVNHVLQADEGCDFDFLVGCR 573 Query: 181 GAXGCDFDFLVGCAAIPKHSH 201 G +A+P+HSH Sbjct: 574 G------------SAVPRHSH 582