BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0003.0073.p (258 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774466.1| dehydrogenase oxidoreductase [Herbaspirillum... 400 e-109 ref|YP_004751964.1| putative L-arabinose 1-dehydrogenase [Collim... 386 e-105 ref|YP_002942958.1| short-chain dehydrogenase/reductase SDR [Var... 322 4e-86 ref|ZP_08406869.1| short-chain dehydrogenase/reductase SDR [Hyle... 321 8e-86 ref|YP_995535.1| short-chain dehydrogenase/reductase SDR [Vermin... 316 3e-84 >ref|YP_003774466.1| dehydrogenase oxidoreductase [Herbaspirillum seropedicae SmR1] gb|ADJ62558.1| dehydrogenase oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 261 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 202/252 (80%), Positives = 224/252 (88%) Query: 6 QLASYPSLKGKRVFITGGGTGIGAAIVSALAEQGAVVAFVDIAKDASEALCKQIADAGFT 65 QLAS+PSLKGKRVFITGGGTGIGAAIV A A+QGA VAFVDIA +ASEALC ++A AG Sbjct: 9 QLASFPSLKGKRVFITGGGTGIGAAIVEAFAQQGAHVAFVDIATEASEALCNEVAAAGHP 68 Query: 66 APSFRYCDLRDIASLQNTIRELAAQLGDFDVLVNNAANDERHKLEDVTQEYWDNRIAINQ 125 P FR+CDLRDI + Q TI EL AQLGDFDVLVNNAAND+RHKLE+VT EYW++RIAINQ Sbjct: 69 KPLFRHCDLRDIPAFQATIAELQAQLGDFDVLVNNAANDQRHKLEEVTLEYWNDRIAINQ 128 Query: 126 RPSFFAVQAIAPGMIKKKAGSIINFSSISWHTSSGGFPVYTTAKSSVLGLTRGLARDLGA 185 RPSFFAVQ++ GM ++ GSIINFSSISWH S GGFPVYTTAK+S LGLTRGLARDLG Sbjct: 129 RPSFFAVQSVVEGMKRRGGGSIINFSSISWHQSGGGFPVYTTAKASTLGLTRGLARDLGP 188 Query: 186 HNIRVNTVTPGWVMTERQIELWLDEKGKEDIARNQCLQGELLPWHLARMVLFLASDESVM 245 H IRVNTVTPGWVMTERQI+LWLDE+GK+ IARNQCLQG+LLPWHLARMVLFLA+D+S M Sbjct: 189 HKIRVNTVTPGWVMTERQIKLWLDEEGKKAIARNQCLQGDLLPWHLARMVLFLAADDSAM 248 Query: 246 CTAQEFIVDAGW 257 CTAQEFIVDAGW Sbjct: 249 CTAQEFIVDAGW 260 >ref|YP_004751964.1| putative L-arabinose 1-dehydrogenase [Collimonas fungivorans Ter331] gb|AEK61141.1| putative L-arabinose 1-dehydrogenase [Collimonas fungivorans Ter331] Length = 260 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 192/253 (75%), Positives = 219/253 (86%) Query: 6 QLASYPSLKGKRVFITGGGTGIGAAIVSALAEQGAVVAFVDIAKDASEALCKQIADAGFT 65 QLA +PSLKGK VF+TGGG+GIGAAIV A AEQGA VAFVDI ASEALC+Q+A AG Sbjct: 8 QLAHFPSLKGKNVFVTGGGSGIGAAIVGAFAEQGARVAFVDIETAASEALCEQLAAAGLP 67 Query: 66 APSFRYCDLRDIASLQNTIRELAAQLGDFDVLVNNAANDERHKLEDVTQEYWDNRIAINQ 125 P FR+CD+RDIA+LQ+TI LA +LGDFDVLVNNAAND+RH+ E+VT +YW++RIAINQ Sbjct: 68 RPLFRHCDIRDIAALQSTIEGLAQELGDFDVLVNNAANDQRHQWEEVTVDYWNDRIAINQ 127 Query: 126 RPSFFAVQAIAPGMIKKKAGSIINFSSISWHTSSGGFPVYTTAKSSVLGLTRGLARDLGA 185 RP FF QA+APGM KK GSIIN SSISWH S+GG+PVYTTAK++V+GLTRGLARDLG Sbjct: 128 RPMFFTCQAVAPGMRKKGGGSIINLSSISWHLSNGGYPVYTTAKAAVVGLTRGLARDLGP 187 Query: 186 HNIRVNTVTPGWVMTERQIELWLDEKGKEDIARNQCLQGELLPWHLARMVLFLASDESVM 245 HNIRVNTV+PGWVMTERQI LWLD G+EDI RNQCL G+L PWHLARMVLFLA+D+S M Sbjct: 188 HNIRVNTVSPGWVMTERQIALWLDAAGEEDIKRNQCLPGKLQPWHLARMVLFLAADDSAM 247 Query: 246 CTAQEFIVDAGWA 258 CTAQEFIVDAGWA Sbjct: 248 CTAQEFIVDAGWA 260 >ref|YP_002942958.1| short-chain dehydrogenase/reductase SDR [Variovorax paradoxus S110] gb|ACS17692.1| short-chain dehydrogenase/reductase SDR [Variovorax paradoxus S110] Length = 258 Score = 322 bits (824), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 156/257 (60%), Positives = 200/257 (77%) Query: 1 MSATYQLASYPSLKGKRVFITGGGTGIGAAIVSALAEQGAVVAFVDIAKDASEALCKQIA 60 M + QL+ +PSLKG+ VF+TGGG+GIGAA+V+A A QGA VAFVDIA+ AS AL ++IA Sbjct: 1 MKDSPQLSIHPSLKGRTVFVTGGGSGIGAAMVAAFAAQGARVAFVDIAEGASAALAQRIA 60 Query: 61 DAGFTAPSFRYCDLRDIASLQNTIRELAAQLGDFDVLVNNAANDERHKLEDVTQEYWDNR 120 G AP +R CD+RDI +LQ I + AA+LGDF VLVNN A+D+RH LE VT +Y+DNR Sbjct: 61 QEGHAAPWWRACDVRDIGALQKAIADAAAELGDFAVLVNNVASDDRHTLESVTPDYYDNR 120 Query: 121 IAINQRPSFFAVQAIAPGMIKKKAGSIINFSSISWHTSSGGFPVYTTAKSSVLGLTRGLA 180 +AIN+RP+ FA+Q++ PGM + GS+IN S W T G+P Y AKSSV GLTRGLA Sbjct: 121 MAINERPALFAIQSVVPGMRRLGFGSVINLGSTGWQTKGSGYPCYAIAKSSVNGLTRGLA 180 Query: 181 RDLGAHNIRVNTVTPGWVMTERQIELWLDEKGKEDIARNQCLQGELLPWHLARMVLFLAS 240 +LG IR+NTV+PGWVMTERQ++LWLD++G++ + RNQCL +L+P +ARMVLFLAS Sbjct: 181 VELGRDRIRINTVSPGWVMTERQVQLWLDDEGEQSLKRNQCLPDKLMPEDIARMVLFLAS 240 Query: 241 DESVMCTAQEFIVDAGW 257 D++ MCTAQEF VDAGW Sbjct: 241 DDARMCTAQEFTVDAGW 257 >ref|ZP_08406869.1| short-chain dehydrogenase/reductase SDR [Hylemonella gracilis ATCC 19624] gb|EGI76035.1| short-chain dehydrogenase/reductase SDR [Hylemonella gracilis ATCC 19624] Length = 264 Score = 321 bits (822), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 160/252 (63%), Positives = 198/252 (78%) Query: 6 QLASYPSLKGKRVFITGGGTGIGAAIVSALAEQGAVVAFVDIAKDASEALCKQIADAGFT 65 Q + +PSLK + VFITGGG+GIGAAIVSA AEQGA VAFVD+A+DASE L +Q+ADAG Sbjct: 12 QFSRFPSLKDRAVFITGGGSGIGAAIVSAFAEQGARVAFVDVARDASEKLAQQVADAGHA 71 Query: 66 APSFRYCDLRDIASLQNTIRELAAQLGDFDVLVNNAANDERHKLEDVTQEYWDNRIAINQ 125 P +R CD+RD+ +LQ+ I++ A +LGDF LVNN AND+RH LE VT EY+D R+AIN+ Sbjct: 72 RPWWRVCDVRDVKALQSAIQDAAKELGDFSALVNNVANDDRHTLESVTPEYYDERMAINE 131 Query: 126 RPSFFAVQAIAPGMIKKKAGSIINFSSISWHTSSGGFPVYTTAKSSVLGLTRGLARDLGA 185 RP+FFA+QA+ PGM + AGS+IN S W G +P Y AKSSV GLTRGLA+ LG Sbjct: 132 RPAFFAIQAVVPGMRRLGAGSVINLGSTGWQGKGGAYPCYAIAKSSVNGLTRGLAKPLGR 191 Query: 186 HNIRVNTVTPGWVMTERQIELWLDEKGKEDIARNQCLQGELLPWHLARMVLFLASDESVM 245 IR+NTV+PGWVMTERQI+LWLD +G+++I RNQCL +L P +ARMVLFLASD++ M Sbjct: 192 DRIRINTVSPGWVMTERQIKLWLDAEGEQEIQRNQCLPDKLQPHDIARMVLFLASDDAAM 251 Query: 246 CTAQEFIVDAGW 257 CTAQEF VDAGW Sbjct: 252 CTAQEFKVDAGW 263 >ref|YP_995535.1| short-chain dehydrogenase/reductase SDR [Verminephrobacter eiseniae EF01-2] gb|ABM56517.1| short-chain dehydrogenase/reductase SDR [Verminephrobacter eiseniae EF01-2] Length = 270 Score = 316 bits (809), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 159/252 (63%), Positives = 199/252 (78%) Query: 7 LASYPSLKGKRVFITGGGTGIGAAIVSALAEQGAVVAFVDIAKDASEALCKQIADAGFTA 66 A +PSL + VF+TGGG+GIGAAIVSA A QGA VAFVD+A+ ASE+L +Q+ADAG Sbjct: 19 FAHFPSLANRAVFVTGGGSGIGAAIVSAFARQGARVAFVDVARPASESLAQQLADAGHPR 78 Query: 67 PSFRYCDLRDIASLQNTIRELAAQLGDFDVLVNNAANDERHKLEDVTQEYWDNRIAINQR 126 P +R CD+RD+A+LQ +I + AAQLGDF VLVNN AND+RH LE VT Y+D R+A+N+R Sbjct: 79 PWWRVCDVRDVAALQASIGDAAAQLGDFSVLVNNVANDDRHSLESVTPAYYDERMAVNER 138 Query: 127 PSFFAVQAIAPGMIKKKAGSIINFSSISWHTSSGGFPVYTTAKSSVLGLTRGLARDLGAH 186 P+FFA+QA+ PGM + AGS+IN S+SW + + GF YT AK+SV GLTRGLA+ LG Sbjct: 139 PAFFAIQAVVPGMRRLGAGSVINLGSVSWQSKTPGFACYTIAKASVNGLTRGLAKTLGQD 198 Query: 187 NIRVNTVTPGWVMTERQIELWLDEKGKEDIARNQCLQGELLPWHLARMVLFLASDESVMC 246 IR+NTV+PGWVMTERQI+LWLD +G+++I RNQCL L +ARMVLFLASD++ MC Sbjct: 199 RIRINTVSPGWVMTERQIKLWLDAEGEQEIRRNQCLPDRLQAHDIARMVLFLASDDAAMC 258 Query: 247 TAQEFIVDAGWA 258 TAQEF VDAGWA Sbjct: 259 TAQEFKVDAGWA 270