BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0003.0050.p (190 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001895747.1| uracil-DNA glycosylase superfamily [Burkhold... 214 4e-54 ref|YP_001861140.1| uracil-DNA glycosylase superfamily protein [... 203 8e-51 ref|YP_001685193.1| uracil-DNA glycosylase superfamily protein [... 199 1e-49 ref|ZP_07031454.1| Uracil-DNA glycosylase superfamily [Acidobact... 195 2e-48 ref|YP_004184483.1| Uracil-DNA glycosylase superfamily [Terriglo... 194 5e-48 >ref|YP_001895747.1| uracil-DNA glycosylase superfamily [Burkholderia phytofirmans PsJN] gb|ACD16523.1| Uracil-DNA glycosylase superfamily [Burkholderia phytofirmans PsJN] Length = 188 Score = 214 bits (545), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 106/185 (57%), Positives = 129/185 (69%), Gaps = 8/185 (4%) Query: 1 MMPSVT---VTSPLPDLLAPGLDVVFCGINPGMRAAASGHHFMGRSNRFWKTVHLSGFTP 57 + PSVT + LPDLL PGL VVFCGINPG++AA++G HF GR NRFW+ +HLSGFTP Sbjct: 4 LTPSVTRADLLQSLPDLLEPGLSVVFCGINPGVQAASTGGHFAGRGNRFWRAIHLSGFTP 63 Query: 58 ELIDPLDDCRILDHRCGLTTVVERPTARRXGARADELLRDEFIRSAETLRKKMEQLKPKC 117 E I+P DD +L + CGLTTVV RPT ARAD+L EF +A +K+E P+C Sbjct: 64 EQIEPNDDYTLLQYGCGLTTVVSRPT-----ARADQLSSWEFRAAAAGFERKIEGYAPQC 118 Query: 118 LAFLGKPAYQAIAGQPKVDWGKQPEKFGGAMVWLLPNPSGLNRGFSQDMLVQAYRELREE 177 +AFLGK A A++G ++WG QP FGGA W+LPNPSGLNR FS D LV AYRELR Sbjct: 119 VAFLGKMALSAMSGSRDIEWGPQPATFGGARAWVLPNPSGLNRSFSLDALVTAYRELRLA 178 Query: 178 LAKTG 182 +A G Sbjct: 179 VAPAG 183 >ref|YP_001861140.1| uracil-DNA glycosylase superfamily protein [Burkholderia phymatum STM815] gb|ACC74094.1| Uracil-DNA glycosylase superfamily [Burkholderia phymatum STM815] Length = 179 Score = 203 bits (517), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 98/174 (56%), Positives = 121/174 (69%), Gaps = 5/174 (2%) Query: 2 MPSVTVTSPLPDLLAPGLDVVFCGINPGMRAAASGHHFMGRSNRFWKTVHLSGFTPELID 61 MP + LPD+LAPGL VVFCGINPG+ AAA+GHHF GR NRFW+T++L+GFTPEL+ Sbjct: 1 MPRADTPNHLPDILAPGLSVVFCGINPGLCAAATGHHFAGRGNRFWRTLYLAGFTPELLR 60 Query: 62 PLDDCRILDHRCGLTTVVERPTARRXGARADELLRDEFIRSAETLRKKMEQLKPKCLAFL 121 DD +L H CG T V RPT ARA L R E +A +K+ Q P+ +AFL Sbjct: 61 AEDDRSLLLHACGSTAAVARPT-----ARAQHLSRAEIRTAAPEFERKIAQYAPRYIAFL 115 Query: 122 GKPAYQAIAGQPKVDWGKQPEKFGGAMVWLLPNPSGLNRGFSQDMLVQAYRELR 175 GK A + G+ +++WG QP+ FGGA +W+LPNPSGLNR FSQD LV AYRELR Sbjct: 116 GKMAASELIGKREIEWGPQPQTFGGARIWVLPNPSGLNRAFSQDALVSAYRELR 169 >ref|YP_001685193.1| uracil-DNA glycosylase superfamily protein [Caulobacter sp. K31] gb|ABZ72695.1| Uracil-DNA glycosylase superfamily [Caulobacter sp. K31] Length = 186 Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 93/166 (56%), Positives = 121/166 (72%), Gaps = 5/166 (3%) Query: 10 PLPDLLAPGLDVVFCGINPGMRAAASGHHFMGRSNRFWKTVHLSGFTPELIDPLDDCRIL 69 PLPD++ PGL V+FCG+NPG+ AAA+GHHF+GRSNRFW+ +HL+GFTP+ I P D +L Sbjct: 4 PLPDIVGPGLSVIFCGLNPGLSAAAAGHHFVGRSNRFWRVLHLAGFTPDQIAPEQDASLL 63 Query: 70 DHRCGLTTVVERPTARRXGARADELLRDEFIRSAETLRKKMEQLKPKCLAFLGKPAYQAI 129 + GLT+VVERPT A D+L R EF+ +AE + + + P+C+AFLGK AY A+ Sbjct: 64 AYGLGLTSVVERPT-----AGVDDLARAEFVAAAEGFERWVRRHDPRCIAFLGKAAYAAM 118 Query: 130 AGQPKVDWGKQPEKFGGAMVWLLPNPSGLNRGFSQDMLVQAYRELR 175 G+ V WG+Q + FGGA+ W+LPNPSG N FS D LV AYRELR Sbjct: 119 MGRQAVPWGRQADPFGGAVAWVLPNPSGRNLAFSLDALVIAYRELR 164 >ref|ZP_07031454.1| Uracil-DNA glycosylase superfamily [Acidobacterium sp. MP5ACTX8] gb|EFI55680.1| Uracil-DNA glycosylase superfamily [Acidobacterium sp. MP5ACTX8] Length = 187 Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 96/175 (54%), Positives = 123/175 (70%), Gaps = 5/175 (2%) Query: 2 MPSVTVTSPLPDLLAPGLDVVFCGINPGMRAAASGHHFMGRSNRFWKTVHLSGFTPELID 61 +P+ LPD+LA GL VVFCGINPG+R+A G+HF GRSNRFW+ +HLSGFTPE I Sbjct: 14 LPAENPIQGLPDILANGLSVVFCGINPGLRSAVLGYHFAGRSNRFWRVLHLSGFTPEQIL 73 Query: 62 PLDDCRILDHRCGLTTVVERPTARRXGARADELLRDEFIRSAETLRKKMEQLKPKCLAFL 121 P + +LD+RCGLT+ VERPT A++L R +FI L +K+ Q P+ +AFL Sbjct: 74 PENARSLLDYRCGLTSAVERPT-----VGANDLRRIDFIEGRPELERKIRQYGPRYIAFL 128 Query: 122 GKPAYQAIAGQPKVDWGKQPEKFGGAMVWLLPNPSGLNRGFSQDMLVQAYRELRE 176 GKPA AI Q ++ WG+Q +FGGA VW+LPNPSGL+R F+ + LV AYREL E Sbjct: 129 GKPACSAIFNQRELPWGQQSMRFGGAKVWVLPNPSGLSRAFTLENLVTAYRELVE 183 >ref|YP_004184483.1| Uracil-DNA glycosylase superfamily [Terriglobus saanensis SP1PR4] gb|ADV84489.1| Uracil-DNA glycosylase superfamily [Terriglobus saanensis SP1PR4] Length = 181 Score = 194 bits (493), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 93/167 (55%), Positives = 117/167 (70%), Gaps = 5/167 (2%) Query: 9 SPLPDLLAPGLDVVFCGINPGMRAAASGHHFMGRSNRFWKTVHLSGFTPELIDPLDDCRI 68 + L D+LA LDV+FCGINP + AA +GHHF RSNRFW+++HL+GFTP I P DD I Sbjct: 14 TQLADMLAGNLDVLFCGINPALSAAHAGHHFSNRSNRFWRSLHLAGFTPHQIRPEDDHTI 73 Query: 69 LDHRCGLTTVVERPTARRXGARADELLRDEFIRSAETLRKKMEQLKPKCLAFLGKPAYQA 128 L H CGLT VERPT +A +L EF A+ L +K+++ P+ LAFLGKPA+ A Sbjct: 74 LHHGCGLTAAVERPT-----VKASDLALHEFRAGADGLERKVQRYHPRFLAFLGKPAFAA 128 Query: 129 IAGQPKVDWGKQPEKFGGAMVWLLPNPSGLNRGFSQDMLVQAYRELR 175 I + V WG+Q +FGGA VW+LPNPSGLNR F+ D LV AYREL+ Sbjct: 129 IFNKRSVAWGRQQVRFGGAEVWVLPNPSGLNRAFTLDALVSAYRELQ 175