BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0003.0041.p         (105 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774519.1| L-idonate 5-dehydrogenase [Herbaspirillum se...   150   8e-35
ref|YP_002947201.1| Alcohol dehydrogenase GroES domain protein [...   116   9e-25
ref|YP_003749613.1| sorbitol dehydrogenase [Ralstonia solanacear...   115   2e-24
emb|CCA87892.1| putative sorbitol dehydrogenase [Ralstonia syzyg...   113   8e-24
ref|NP_522509.1| putative L-idonate 5-dehydrogenase oxidoreducta...   113   9e-24

>ref|YP_003774519.1| L-idonate 5-dehydrogenase [Herbaspirillum seropedicae SmR1]
 gb|ADJ62611.1| L-idonate 5-dehydrogenase protein [Herbaspirillum seropedicae
          SmR1]
          Length = 345

 Score =  150 bits (378), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 71/91 (78%), Positives = 78/91 (85%)

Query: 1  MQQGIVIHAPHDLRVQELQTAELQPHQLKVKVKAGGICGSDLHYYHNGGFGTVRIKEPMV 60
          MQQG+VIHAPHDLR+Q L T  LQP QLKVKVKAGGICGSDLHYYH+GGFG VRIKEPMV
Sbjct: 1  MQQGLVIHAPHDLRIQALDTGALQPQQLKVKVKAGGICGSDLHYYHHGGFGVVRIKEPMV 60

Query: 61 LGHEVSGVIAEIGSAIGDIKAGTRIXGAPCR 91
          LGHEVSG IAE+G+A+ DI  GTRI  +P R
Sbjct: 61 LGHEVSGQIAEVGTAVTDIAPGTRIAISPSR 91


>ref|YP_002947201.1| Alcohol dehydrogenase GroES domain protein [Variovorax paradoxus
          S110]
 gb|ACS21935.1| Alcohol dehydrogenase GroES domain protein [Variovorax paradoxus
          S110]
          Length = 345

 Score =  116 bits (291), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 55/89 (61%), Positives = 69/89 (77%)

Query: 3  QGIVIHAPHDLRVQELQTAELQPHQLKVKVKAGGICGSDLHYYHNGGFGTVRIKEPMVLG 62
          + +VIHAP DLRV+E+ T EL  +QL+V+V+ GGICGSDLHYY +GGFGTVRI+EPMVLG
Sbjct: 2  EALVIHAPGDLRVEEVPTPELGANQLQVRVRCGGICGSDLHYYQHGGFGTVRIQEPMVLG 61

Query: 63 HEVSGVIAEIGSAIGDIKAGTRIXGAPCR 91
          HEV+GVI  +G  +    AG RI  +P R
Sbjct: 62 HEVAGVIEAVGPEVSGFSAGQRIAVSPSR 90


>ref|YP_003749613.1| sorbitol dehydrogenase [Ralstonia solanacearum PSI07]
 emb|CBJ34974.1| putative sorbitol dehydrogenase [Ralstonia solanacearum PSI07]
          Length = 344

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 50/89 (56%), Positives = 70/89 (78%)

Query: 3  QGIVIHAPHDLRVQELQTAELQPHQLKVKVKAGGICGSDLHYYHNGGFGTVRIKEPMVLG 62
            +VIHA +DLR++++ T E+QPHQ++V+V+ GGICGSDLHYY++GGFGTVR+KEPMVLG
Sbjct: 2  DALVIHAANDLRIEDIATPEVQPHQMRVQVRFGGICGSDLHYYNHGGFGTVRVKEPMVLG 61

Query: 63 HEVSGVIAEIGSAIGDIKAGTRIXGAPCR 91
          HEV+G + E+G  +     G R+  +P R
Sbjct: 62 HEVAGRVEEVGQGVHQHAKGDRVAISPSR 90


>emb|CCA87892.1| putative sorbitol dehydrogenase [Ralstonia syzygii R24]
          Length = 344

 Score =  113 bits (283), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 50/87 (57%), Positives = 70/87 (80%)

Query: 5  IVIHAPHDLRVQELQTAELQPHQLKVKVKAGGICGSDLHYYHNGGFGTVRIKEPMVLGHE 64
          +VIHA +DLR++++ T E+QP+Q++V+V+ GGICGSDLHYY++GGFGTVR+KEPMVLGHE
Sbjct: 4  LVIHAANDLRIEDIATPEVQPNQMRVQVRFGGICGSDLHYYNHGGFGTVRVKEPMVLGHE 63

Query: 65 VSGVIAEIGSAIGDIKAGTRIXGAPCR 91
          V+G + EIG  +     G R+  +P R
Sbjct: 64 VAGRVEEIGQGVHQHAKGDRVAISPSR 90


>ref|NP_522509.1| putative L-idonate 5-dehydrogenase oxidoreductase protein
          [Ralstonia solanacearum GMI1000]
 emb|CAD18099.1| putative l-idonate 5-dehydrogenase oxidoreductase protein
          [Ralstonia solanacearum GMI1000]
          Length = 344

 Score =  113 bits (283), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 51/89 (57%), Positives = 69/89 (77%)

Query: 3  QGIVIHAPHDLRVQELQTAELQPHQLKVKVKAGGICGSDLHYYHNGGFGTVRIKEPMVLG 62
            +VIHA +DLR++++ T E+QP QL+V+V+ GGICGSDLHYY++GGFGTVR+KEPMVLG
Sbjct: 2  DALVIHAANDLRIEDIDTPEVQPDQLRVQVRFGGICGSDLHYYNHGGFGTVRVKEPMVLG 61

Query: 63 HEVSGVIAEIGSAIGDIKAGTRIXGAPCR 91
          HEV+G + EIG  +     G R+  +P R
Sbjct: 62 HEVAGRVEEIGPGVHRHAKGDRVAISPSR 90