BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0003.0028.p (291 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774663.1| transmembrane protein [Herbaspirillum serope... 396 e-108 ref|YP_001354527.1| molybdopterin/thiamine biosynthesis family p... 394 e-108 ref|YP_001100843.1| putative molybdenum cofactor biosynthesis pr... 387 e-105 ref|ZP_08273318.1| Dinucleotide-utilizing enzymes involved in mo... 374 e-101 ref|YP_004754423.1| putative Molybdenum cofactor biosynthesis pr... 368 e-100 >ref|YP_003774663.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ62755.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 285 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 207/279 (74%), Positives = 234/279 (83%), Gaps = 8/279 (2%) Query: 14 DIDFDRRFGGIARLYGAQGLARFRAAHICVVGVGGVGSWIVEALARSAIGKITMIDLDNL 73 DID++RRFGG+ARLYGA L RFR A +CVVGVGGVGSWIVEALARSAIG +T++DLDNL Sbjct: 9 DIDYERRFGGVARLYGAAALQRFRQARVCVVGVGGVGSWIVEALARSAIGHLTLVDLDNL 68 Query: 74 AESNVNRQIHALTDTLGKAKVTALHERIMQINPYCQVTEIEDFLTPDNVAEMIGEGRFDY 133 AESNVNRQIHALT TLG+AKVTALHERI QINP C VTE+EDF+ PDNV +M+G RFDY Sbjct: 69 AESNVNRQIHALTTTLGQAKVTALHERIRQINPTCVVTEVEDFVDPDNVEKMLGGERFDY 128 Query: 134 VVDAIDNVRAKVALIAYCREHKVPLLTSGGAGGQIDPTRIEIRDLCRTEQEPLLAKVRKR 193 V+DAIDNV AKVA+IA+CR++ +P++T G AGGQIDPT+IEIRDLCRTEQEPLLAKVRKR Sbjct: 129 VIDAIDNVPAKVAMIAWCRKNGMPMVTIGSAGGQIDPTQIEIRDLCRTEQEPLLAKVRKR 188 Query: 194 LRAWHKFPRGTKNKFGIDAVFSTEPLRFP---EGEVCEV-DTDDAADGLDTVDADGRKQD 249 LRA H FPRGTKNKF IDAVFSTEPLRFP EGE CE+ +D G D D+ Sbjct: 189 LRAQHGFPRGTKNKFHIDAVFSTEPLRFPELAEGEACEIAPAEDIDVGEDAADS----TQ 244 Query: 250 AGVTGLNCAGFGSAMVVTASFGLVAAGFVLRKIVERPDA 288 AGVTGLNCAGFGSAMVVTASFGLVAA VL+K+ E+ A Sbjct: 245 AGVTGLNCAGFGSAMVVTASFGLVAAAHVLKKLAEQAAA 283 >ref|YP_001354527.1| molybdopterin/thiamine biosynthesis family protein [Janthinobacterium sp. Marseille] gb|ABR89594.1| Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Janthinobacterium sp. Marseille] Length = 283 Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust. Identities = 209/270 (77%), Positives = 229/270 (84%), Gaps = 16/270 (5%) Query: 14 DIDFDRRFGGIARLYGAQGLARFRAAHICVVGVGGVGSWIVEALARSAIGKITMIDLDNL 73 DIDFDRRFGGIARLYG+ L RFR+AH+CV+GVGGVGSW+VEALARSAIGKITMIDLDNL Sbjct: 14 DIDFDRRFGGIARLYGSAALERFRSAHVCVIGVGGVGSWVVEALARSAIGKITMIDLDNL 73 Query: 74 AESNVNRQIHALTDTLGKAKVTALHERIMQINPYCQVTEIEDFLTPDNVAEMIGEGRFDY 133 AESN+NRQIHALTDTLGKAKVTAL ERI QINPYC VTEIEDFL+ DN+ EMIG +DY Sbjct: 74 AESNINRQIHALTDTLGKAKVTALAERIAQINPYCVVTEIEDFLSADNLDEMIGAHHYDY 133 Query: 134 VVDAIDNVRAKVALIAYCREHKVPLLTSGGAGGQIDPTRIEIRDLCRTEQEPLLAKVRKR 193 ++DAIDNVRAK ALIAYCR+H + L+T G AGGQIDPTRIE+ DLCRTEQEPLLAKVRKR Sbjct: 134 IIDAIDNVRAKTALIAYCRQHGLKLVTIGSAGGQIDPTRIEVLDLCRTEQEPLLAKVRKR 193 Query: 194 LRAWHKFPRGTKNKFGIDAVFSTEPLRFPE-GEVCEVDTDDAADGLDTVDADGRKQDAGV 252 LRA H FPRGTKNKFGIDAVFS+EPLRFPE EVC VD D + +G+ Sbjct: 194 LRAEHGFPRGTKNKFGIDAVFSSEPLRFPETAEVCAVDGD---------------EQSGI 238 Query: 253 TGLNCAGFGSAMVVTASFGLVAAGFVLRKI 282 TGLNCAGFGSAMVVTASFGLVAA VLRK+ Sbjct: 239 TGLNCAGFGSAMVVTASFGLVAAAHVLRKL 268 >ref|YP_001100843.1| putative molybdenum cofactor biosynthesis protein MoeB [Herminiimonas arsenicoxydans] emb|CAL62722.1| Conserved hypothetical protein, putative molybdenum cofactor biosynthesis [Herminiimonas arsenicoxydans] Length = 289 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 212/279 (75%), Positives = 230/279 (82%), Gaps = 20/279 (7%) Query: 4 LEPVVAANDADIDFDRRFGGIARLYGAQGLARFRAAHICVVGVGGVGSWIVEALARSAIG 63 L PVV +IDF+RRFGGIARLYG L RFRAAH+CVVGVGGVGSW+VEALARSAIG Sbjct: 8 LTPVVP----EIDFERRFGGIARLYGPAALTRFRAAHVCVVGVGGVGSWVVEALARSAIG 63 Query: 64 KITMIDLDNLAESNVNRQIHALTDTLGKAKVTALHERIMQINPYCQVTEIEDFLTPDNVA 123 KITMIDLDNLAESNVNRQIHALTDTLGKAKVTAL ERI QINPYC VTEIEDFL+ DN+ Sbjct: 64 KITMIDLDNLAESNVNRQIHALTDTLGKAKVTALAERIDQINPYCVVTEIEDFLSADNLD 123 Query: 124 EMIGEGRFDYVVDAIDNVRAKVALIAYCREHKVPLLTSGGAGGQIDPTRIEIRDLCRTEQ 183 EMIG +DY++DAIDNVRAK ALIAYCR+H + L+T G AGGQIDPT+I + DLCRTEQ Sbjct: 124 EMIGAHHYDYIIDAIDNVRAKTALIAYCRKHGLKLVTIGSAGGQIDPTKIAVLDLCRTEQ 183 Query: 184 EPLLAKVRKRLRAWHKFPRGTKNKFGIDAVFSTEPLRFPEG-EVCEVDTDDAADGLDTVD 242 EPLLAKVRKRLRA H FPRGTKNKFGIDAVFSTEPLRFPE E C++D+D Sbjct: 184 EPLLAKVRKRLRAEHGFPRGTKNKFGIDAVFSTEPLRFPESEEACDIDSD---------- 233 Query: 243 ADGRKQDAGVTGLNCAGFGSAMVVTASFGLVAAGFVLRK 281 AG+TGLNCAGFGSAMVVTASFGLVAA VLRK Sbjct: 234 -----TPAGITGLNCAGFGSAMVVTASFGLVAAAHVLRK 267 >ref|ZP_08273318.1| Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Oxalobacteraceae bacterium IMCC9480] gb|EGF33217.1| Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Oxalobacteraceae bacterium IMCC9480] Length = 273 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 197/270 (72%), Positives = 225/270 (83%), Gaps = 15/270 (5%) Query: 14 DIDFDRRFGGIARLYGAQGLARFRAAHICVVGVGGVGSWIVEALARSAIGKITMIDLDNL 73 +IDF+RRFGGIARLYGA LARFRAAH+CV+GVGGVGSWIVEALARSAIG+ITMIDLDNL Sbjct: 14 EIDFERRFGGIARLYGAPALARFRAAHVCVIGVGGVGSWIVEALARSAIGQITMIDLDNL 73 Query: 74 AESNVNRQIHALTDTLGKAKVTALHERIMQINPYCQVTEIEDFLTPDNVAEMIGEGRFDY 133 AESNVNRQIHALT T+G+AKVTAL ERI QINP+C+V +IE+F+ DN+ MIG +DY Sbjct: 74 AESNVNRQIHALTATMGQAKVTALAERIAQINPFCRVNQIEEFIDADNLDAMIGSRGYDY 133 Query: 134 VVDAIDNVRAKVALIAYCREHKVPLLTSGGAGGQIDPTRIEIRDLCRTEQEPLLAKVRKR 193 +VDAIDNVRAK ALIAYCR HK+ L+T GGAGGQ+DPT+IE+RDLCRTEQEPLLAKVRKR Sbjct: 134 IVDAIDNVRAKTALIAYCRTHKLRLITIGGAGGQVDPTKIEVRDLCRTEQEPLLAKVRKR 193 Query: 194 LRAWHKFPRGTKNKFGIDAVFSTEPLRFP-EGEVCEVDTDDAADGLDTVDADGRKQDAGV 252 LR+ H FPRGT+NKFGIDAVFSTE LRFP E + D+D+A AG+ Sbjct: 194 LRSEHGFPRGTRNKFGIDAVFSTEHLRFPAAAESADDDSDEAV--------------AGI 239 Query: 253 TGLNCAGFGSAMVVTASFGLVAAGFVLRKI 282 TGLNCAGFGSAMV TA+FG+VAA VL KI Sbjct: 240 TGLNCAGFGSAMVGTAAFGIVAASQVLNKI 269 >ref|YP_004754423.1| putative Molybdenum cofactor biosynthesis protein [Collimonas fungivorans Ter331] gb|AEK63600.1| putative Molybdenum cofactor biosynthesis protein [Collimonas fungivorans Ter331] Length = 288 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 193/270 (71%), Positives = 220/270 (81%), Gaps = 16/270 (5%) Query: 14 DIDFDRRFGGIARLYGAQGLARFRAAHICVVGVGGVGSWIVEALARSAIGKITMIDLDNL 73 +IDFDRRFGGIARLYGA LARF AH+CV+GVGGVGSW +EALARSAIG +TMIDLDNL Sbjct: 26 EIDFDRRFGGIARLYGAAALARFLQAHVCVIGVGGVGSWAIEALARSAIGNLTMIDLDNL 85 Query: 74 AESNVNRQIHALTDTLGKAKVTALHERIMQINPYCQVTEIEDFLTPDNVAEMIGEGRFDY 133 AESN+NRQIHALTDTLG+AKV+AL RI QINPYC VTE+EDF+T DN+AEMIG R+DY Sbjct: 86 AESNINRQIHALTDTLGQAKVSALAARIAQINPYCHVTEVEDFITADNLAEMIGTQRYDY 145 Query: 134 VVDAIDNVRAKVALIAYCREHKVPLLTSGGAGGQIDPTRIEIRDLCRTEQEPLLAKVRKR 193 V+DAIDNVRAK ALIAYCR+ + L+T G AGGQ+D T IE+RDL +TEQEPLLAKVRKR Sbjct: 146 VIDAIDNVRAKAALIAYCRDQGIRLITIGSAGGQVDATCIEVRDLAKTEQEPLLAKVRKR 205 Query: 194 LRAWHKFPRGTKNKFGIDAVFSTEPLRFP-EGEVCEVDTDDAADGLDTVDADGRKQDAGV 252 LR+ ++FPRG K +FGIDAVFSTEPL P EVC VD D A GV Sbjct: 206 LRSEYRFPRGDKVRFGIDAVFSTEPLSAPLSAEVCAVDADAA---------------PGV 250 Query: 253 TGLNCAGFGSAMVVTASFGLVAAGFVLRKI 282 TGLNCAG+GSA+VVTA+FGLVAAG VLRK+ Sbjct: 251 TGLNCAGYGSAVVVTATFGLVAAGHVLRKL 280