BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0003.0024.p         (147 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004415293.1| acetyl-CoA synthetase [Pusillimonas sp. T7-7...   128   3e-28
ref|ZP_01549387.1| acetyl-CoA synthetase [Stappia aggregata IAM ...   108   4e-22
ref|YP_003450647.1| acetyl-CoA synthetase [Azospirillum sp. B510...   107   7e-22
ref|ZP_05087326.1| acetyl-coenzyme A synthetase [Pseudovibrio sp...   104   5e-21
ref|ZP_03575052.1| AMP-dependent synthetase and ligase [Burkhold...   101   3e-20

>ref|YP_004415293.1| acetyl-CoA synthetase [Pusillimonas sp. T7-7]
 gb|AEC18669.1| acetyl-CoA synthetase [Pusillimonas sp. T7-7]
          Length = 545

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 68/130 (52%), Positives = 80/130 (61%), Gaps = 16/130 (12%)

Query: 1   MLPINPRPYQDICNAFRWDIPEHYNIGIDVCDKWALREPGKLALIHVGADGAXAGVGDRI 60
           MLP+NP+ Y DI   F WDIP  YNIG+DVCDKWA ++  +LALIH+G DGA        
Sbjct: 1   MLPLNPKSYDDISQRFSWDIPPRYNIGVDVCDKWAEQDSARLALIHIGHDGAVRNCS--F 58

Query: 61  GILLPQAPETAIAHVAAYKIGAIAIPLFAITGAGVGDRIGILLPQAPETAIAHVAAYKIG 120
           G LL  +           ++G     L    G   GDR+GILLPQAPETA  H+AAYK G
Sbjct: 59  GELLEMS----------NRVGN----LLLAQGVEPGDRVGILLPQAPETAFGHIAAYKTG 104

Query: 121 AIAIPLFALF 130
            IAIPLFALF
Sbjct: 105 CIAIPLFALF 114


>ref|ZP_01549387.1| acetyl-CoA synthetase [Stappia aggregata IAM 12614]
 gb|EAV41936.1| acetyl-CoA synthetase [Stappia aggregata IAM 12614]
          Length = 543

 Score =  108 bits (269), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 53/138 (38%), Positives = 75/138 (54%), Gaps = 16/138 (11%)

Query: 1   MLPINPRPYQDICNAFRWDIPEHYNIGIDVCDKWALREPGKLALIHVGADGAXAGVGDRI 60
           MLP +   Y D+   F+W+IP+ +NIG+ +CD WA REP + AL++   DG+        
Sbjct: 1   MLPHDATSYDDLSGRFKWEIPDRFNIGVAICDDWAAREPNREALVYTDEDGSA------- 53

Query: 61  GILLPQAPETAIAHVAAYKIGAIAIPLFAITGAGVGDRIGILLPQAPETAIAHVAAYKIG 120
                    T+  +    ++      L    G   GDRIG+L+PQ PETA AH+AA K+G
Sbjct: 54  ---------TSYTYDDLRRLSNQLANLLTARGVQPGDRIGVLMPQRPETAFAHIAALKLG 104

Query: 121 AIAIPLFALFARGGHQRR 138
           AI+IPLF LF     + R
Sbjct: 105 AISIPLFTLFGEEALEYR 122


>ref|YP_003450647.1| acetyl-CoA synthetase [Azospirillum sp. B510]
 dbj|BAI74103.1| acetyl-CoA synthetase [Azospirillum sp. B510]
          Length = 538

 Score =  107 bits (266), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 59/130 (45%), Positives = 75/130 (57%), Gaps = 17/130 (13%)

Query: 1   MLPINPRPYQDICNAFRWDIPEHYNIGIDVCDKWALREPGKLALIHVGADGAXAGVGDRI 60
           MLP N   Y  +  AF W +P+ YNIG+DVCD+WA  EP +LALIH   DG         
Sbjct: 1   MLP-NADSYDAVARAFSWRVPDRYNIGVDVCDRWAEAEPDRLALIHKRRDGG-------- 51

Query: 61  GILLPQAPETAIAHVAAYKIGAIAIPLFAITGAGVGDRIGILLPQAPETAIAHVAAYKIG 120
                   E   + + A  +      + A  G   GDR+GILLPQAPETA++HVA YK+G
Sbjct: 52  ------VEEYRFSDIRA--LSNRFANVLAAQGVDRGDRVGILLPQAPETALSHVAVYKLG 103

Query: 121 AIAIPLFALF 130
            IA+PLF+LF
Sbjct: 104 GIAVPLFSLF 113


>ref|ZP_05087326.1| acetyl-coenzyme A synthetase [Pseudovibrio sp. JE062]
 gb|EEA92248.1| acetyl-coenzyme A synthetase [Pseudovibrio sp. JE062]
          Length = 543

 Score =  104 bits (259), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 54/138 (39%), Positives = 75/138 (54%), Gaps = 17/138 (12%)

Query: 1   MLPINPRPYQDICNAFRWDIPEHYNIGIDVCDKWALREPGKLALIHVGADGAXAGVGDRI 60
           MLP +   Y+++   F+WDIPE +NIG+D+CDKWA ++  + ALI    +G         
Sbjct: 1   MLP-SANTYEELREKFQWDIPEFFNIGVDICDKWADKDAAREALIFAEEEG--------- 50

Query: 61  GILLPQAPETAIAHVAAYKIGAIAIPLFAITGAGVGDRIGILLPQAPETAIAHVAAYKIG 120
                  P T        K+      L    G   GDR+GILLPQAPETA +H+A +K+G
Sbjct: 51  -------PTTTYTFGDLKKLSNQLANLLVSQGINRGDRVGILLPQAPETAFSHIAIHKLG 103

Query: 121 AIAIPLFALFARGGHQRR 138
            I+IPLF+LF     + R
Sbjct: 104 GISIPLFSLFGEEALEYR 121


>ref|ZP_03575052.1| AMP-dependent synthetase and ligase [Burkholderia multivorans
           CGD2M]
 ref|ZP_03577871.1| AMP-dependent synthetase and ligase [Burkholderia multivorans CGD2]
 ref|ZP_03586805.1| AMP-dependent synthetase and ligase [Burkholderia multivorans CGD1]
 gb|EED98482.1| AMP-dependent synthetase and ligase [Burkholderia multivorans CGD1]
 gb|EEE08141.1| AMP-dependent synthetase and ligase [Burkholderia multivorans CGD2]
 gb|EEE10510.1| AMP-dependent synthetase and ligase [Burkholderia multivorans
           CGD2M]
          Length = 539

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/116 (51%), Positives = 69/116 (59%), Gaps = 25/116 (21%)

Query: 1   MLPINPRPYQDICNAFRWDIPEHYNIGIDVCDKWALREPGKLALIHVGADG--------- 51
           MLP   R Y D+   FRW IP HYNIG+D CDKWA    G+LALIH  ADG         
Sbjct: 1   MLPAADR-YDDLLTRFRWAIPAHYNIGVDACDKWA-DGSGRLALIHEAADGDVARFTFDD 58

Query: 52  ------------AXAGV--GDRIGILLPQAPETAIAHVAAYKIGAIAIPLFAITGA 93
                       A AG+  GDRI I L Q PETA+AH+AAYK+GAIA+PLF + GA
Sbjct: 59  LRNASNRLANAFARAGLRRGDRIAIFLAQGPETAVAHLAAYKLGAIAVPLFTLFGA 114