BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0003.0013.p (621 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001355380.1| hypothetical protein mma_3690 [Janthinobacte... 427 e-117 ref|YP_577570.1| hypothetical protein Nham_2318 [Nitrobacter ham... 394 e-107 ref|YP_781868.1| hypothetical protein RPE_2951 [Rhodopseudomonas... 365 2e-98 ref|YP_001681990.1| hypothetical protein Caul_0355 [Caulobacter ... 288 2e-75 ref|NP_900801.1| hypothetical protein CV_1131 [Chromobacterium v... 283 5e-74 >ref|YP_001355380.1| hypothetical protein mma_3690 [Janthinobacterium sp. Marseille] gb|ABR90718.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 611 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 263/601 (43%), Positives = 362/601 (60%), Gaps = 17/601 (2%) Query: 13 DNDLHSPASILS---GRLRVALGVAQGVLLYALYSSWNAKTGLAMQPLLFVPALMLAGFL 69 D +L P +I++ RLR+ G+ QG +LYALY S K A LF P M+ F+ Sbjct: 5 DEELSIPRAIVTDRVARLRLLTGLLQGAILYALYFSLKEKFWPATNGYLFSPLSMIFVFV 64 Query: 70 PIIAVSGIGHLSRRNLLIWLAALAVILSGLGVYDAWRA---DLSSLLPSASTGSGMDGRP 126 PI+ +S +GHL+ R + IW+ A+I +GVYD WR D + L SG P Sbjct: 65 PILFISALGHLNARRMWIWMVVAALICVLMGVYDIWRIGFDDSNHLFGE----SGFRRTP 120 Query: 127 ELLPSATLFLLAVAGLFIAQAMMLAGDADGRRIATYRSYFEMAWKLLVQLLFATLFTGLF 186 +L + L G +IA A++LA AD RRIA Y +YFE AWKL++Q+ F+ LF + Sbjct: 121 SIL----VLLFVTGGFYIAHALVLAAAADERRIARYPTYFETAWKLIIQVKFSILFVAVL 176 Query: 187 WLVLETGNALFSLIKLDFLGKLLERSWFNIPVTTLAFSSALHLSDVRPQIVAGIRKLLLT 246 WL+L G LF L+K++FL KLLE+SWF IPV T AFS+ALH++DVRP IV GIR LLL Sbjct: 177 WLILWLGATLFMLVKVNFLQKLLEQSWFAIPVITFAFSTALHITDVRPGIVRGIRSLLLV 236 Query: 247 LLSWLLPIATIVIGAFLLSILATGLEPLWQTRRATHVLLGAAALLVVLINTVYQDGNHLT 306 L+SWLLPI +++ FLL++ TGLEPLW TR AT VLLGA A LVVLIN +Q G + Sbjct: 237 LMSWLLPITALIVAGFLLTLPFTGLEPLWATRHATAVLLGATATLVVLINAAFQ-GGEVG 295 Query: 307 TRSHRFFTACLRVACLLPAPLVLLAVYSLGLRVAEYGWTVSRVAAATCALVAAMYAAGYA 366 R R+ACLL P+ L+A+YSL LRV +YGW+ RV AA C LVAA YA GY Sbjct: 296 KEVARVLRISARLACLLLLPMTLIAIYSLTLRVQQYGWSNDRVIAAACLLVAACYACGYL 355 Query: 367 LAALSARDKLQRIASTNVLASFAILIVFLALLSPLADPARIAVADQLHRLAIGKTVPQRF 426 AA+ L RIA+ NVL +F +L V +AL +P+ADPARI+VA+QL RL G+ +F Sbjct: 356 WAAVERGVWLARIAAINVLTAFLVLAVLIALFTPVADPARISVANQLARLQSGQVSADKF 415 Query: 427 DFHFLRFDGARFGVQELKRLSEQKNGAYPVAVEEKARSALAGTNRWDREEFDEIAPDAAK 486 DF +LRFDGAR+G + LK E+ G + ++A +AL RW ++ + ++ Sbjct: 416 DFDYLRFDGARYGDRALKAFKEKAEGPDAELIRKRATAALEKKGRWSQQNPNANTQTRSE 475 Query: 487 NIRVHPAGRQLPKEFIAQDWRNDKQRWSLPACMTRGDRQCDAYLVKPDPAGTEQVLVFDG 546 NI V P G+ LP+ F+ QDW N + + LP C+ D +C+AYL+ D G ++L+ + Sbjct: 476 NITVWPNGQTLPEAFLKQDWGNSGRNYLLPDCLKLQDSKCNAYLLDLDGDGKTEILLRNV 535 Query: 547 NSMPALFA-SSGVGAWQLAGKLMATPSCIDELKKTAERGSLNWQPPLQHDIDINGVHLRM 605 L S W+ AG + +C + + AE G + PPL +D+++ G L + Sbjct: 536 QDYGQLVVFSHQTDGWKPAGTMTGNQNCKEVAQALAE-GHVRTAPPLFNDLEVAGQRLHV 594 Query: 606 Q 606 Q Sbjct: 595 Q 595 >ref|YP_577570.1| hypothetical protein Nham_2318 [Nitrobacter hamburgensis X14] gb|ABE63110.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 604 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 249/605 (41%), Positives = 357/605 (59%), Gaps = 30/605 (4%) Query: 25 GRLRVALGVAQGVLLYALYSSWNAKTGLAMQPLLFVPALMLAGFLPIIAVSGIGHLSRRN 84 G +RVA+G+AQG+ LYAL+++ +K A LF + F+P I VSG+G L R Sbjct: 17 GGVRVAIGLAQGIALYALFNAAQSKGWPATNGPLFATLSAVFVFVPAILVSGLGSLRLRL 76 Query: 85 LLIWLAALAVILSGLGVYDAWRADLSSLLPSASTGSGMDGRPELLPSATLFLLAVAGLFI 144 L W A+ VI +GLG YD R +LP+ P ++PS L+L AGLFI Sbjct: 77 LCGWTLAVTVICAGLGWYDIVRN--PGVLPAT---------PRIVPSLQLWLALAAGLFI 125 Query: 145 AQAMMLAGDADGRRIATYRSYFEMAWKLLVQLLFATLFTGLFWLVLETGNALFSLIKLDF 204 AQ++++AG D + A Y +YF+++WK +QLL A LF G+FWL+L G LF LIK+DF Sbjct: 126 AQSLLVAGAGDRKFFARYATYFDVSWKYGLQLLLAALFAGIFWLLLWLGAELFRLIKIDF 185 Query: 205 LGKLLERSWFNIPVTTLAFSSALHLSDVRPQIVAGIRKLLLTLLSWLLPIATIVIGAFLL 264 + +++++WF IP TTLA + A H++DVR IV G+R L LLSWLLP+ T++ AF++ Sbjct: 186 IATIIQKNWFWIPATTLALNCAFHITDVRVSIVRGVRTLSCNLLSWLLPLMTVIALAFIV 245 Query: 265 SILATGLEPLWQTRRATHVLLGAAALLVVLINTVYQDGNHLTTRSHRFFTACLRVACLLP 324 +++ TG++PLWQTRRA+ +LL AAA L+ LIN YQDG ++ T R + R++ + Sbjct: 246 ALVFTGMDPLWQTRRASTILLAAAASLIFLINATYQDGRNIDTDLARPMSRFQRISMMAA 305 Query: 325 A----PLVLLAVYSLGLRVAEYGWTVSRVAAATCALVAAMYAAGYALAALSARDKLQRIA 380 + P VLLA Y + LRV +YGWT R+ A C +VA YA GY +AA + + Sbjct: 306 SAALVPFVLLAAYGIALRVRQYGWTPERIFATACTIVAVCYAVGYVVAAARPNTRFAWVE 365 Query: 381 STNVLASFAILIVFLALLSPLADPARIAVADQLHRLAIGKTVPQRFDFHFLRFDGARFGV 440 N+ +F IL LAL SP+ADPARI+VADQL RL G+ P+RFD+ FLRFD RFG Sbjct: 366 PANIATAFVILATLLALFSPIADPARISVADQLRRLEDGRVAPERFDYAFLRFDAGRFGT 425 Query: 441 QELKRLSEQKNGAYPVAVEEKARSALAGTNRWD-REEFDEIAP-DAAKNIRV-HPAGRQL 497 L L+ QK A VA E+ A S L +R++ R + P D A NI V P G+ L Sbjct: 426 DALHELAGQKTLA--VAAEQSA-SMLRRQSRYEARRLMPALTPDDIAANITVAQPVGQTL 482 Query: 498 PKEFIAQDWRNDKQRWSLPACMTRGDRQCDAYLVKPDPAGTEQVLVFD-GNSMPALFASS 556 P+EF+A DW N+K+ + +PAC+ + +CDA + + G + +++ G S A+F + Sbjct: 483 PREFLATDWINNKRSYLIPACL-KARAKCDAVIADLEGNGADDIILLPAGMSSAAVFRKT 541 Query: 557 GVGAWQLAGKLMATPSCIDELKKTAERGSLNWQPPLQHDIDINGVHLRMQ-----VEQTV 611 G +W L+ C ++ G PP+ ++D+ G LRM E TV Sbjct: 542 GGNSWDFFSTLVNV-GC-RGVRDALIAGQFKIVPPVAKELDVGGQRLRMTWPAGCSEGTV 599 Query: 612 TKCAP 616 T +P Sbjct: 600 TIKSP 604 >ref|YP_781868.1| hypothetical protein RPE_2951 [Rhodopseudomonas palustris BisA53] gb|ABJ06888.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 624 Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 253/606 (41%), Positives = 341/606 (56%), Gaps = 21/606 (3%) Query: 24 SGRLRVALGVAQGVLLYALYSSWNAKTGLAMQPLLFVPALMLAGFLPIIAVSGIGHLSRR 83 +G +R A+G+ QGV LY L+++ KT A P LF P A F+P+IAVSG+ HL R Sbjct: 31 NGAIRAAIGLLQGVALYFLFTAAQDKTWPATAPALFAPLCTAAIFVPLIAVSGLSHLRLR 90 Query: 84 NLLIWLAALAVILSGLGVYDAWRADLSSLLPSASTGSGMDGRPELLPSATLFLLAVAGLF 143 +L+IW A+A+I GL +D R + + L S ST P LP+A L+L AGLF Sbjct: 91 DLVIWSVAVALISFGLAWHDIDRDPVIASLTSTST-------PRNLPAAHLWLGLSAGLF 143 Query: 144 IAQAMMLAGDADGRRIATYRSYFEMAWKLLVQLLFATLFTGLFWLVLETGNALFSLIKLD 203 IA ++++A ++ RRIA+Y SYF AWKL +QL A LFTGLFW VL G LF LIK+ Sbjct: 144 IAHSLIVAAASEHRRIASYPSYFATAWKLGLQLALAVLFTGLFWGVLWLGAELFKLIKIS 203 Query: 204 FLGKLLERSWFNIPVTTLAFSSALHLSDVRPQIVAGIRKLLLTLLSWLLPIATIVIGAFL 263 F + L +SWF IP TT+A + ALH++DVR IV G+R ++ LL+WLLP+ T++ F+ Sbjct: 204 FFAETLRKSWFWIPATTVALTCALHVTDVRAGIVRGVRTVVCNLLAWLLPLLTLIAAGFV 263 Query: 264 LSILATGLEPLWQTRRATHVLLGAAALLVVLINTVYQDGNHLTTRSH-----RFFTACLR 318 +++ TGL PLW T+RA +LL AAA LV L+N QDG L R R + Sbjct: 264 VALPFTGLAPLWDTKRAAAILLIAAASLVFLLNAAVQDGTRLAPRDATPPLPRLLRGAII 323 Query: 319 VACLLPAPLVLLAVYSLGLRVAEYGWTVSRVAAATCALVAAMYAAGYALAALSARDKLQR 378 A L+ PLV LA Y++ LRV +YGW+ SRV A C L+AA Y GY AAL R L Sbjct: 324 AASLVLLPLVALAGYAIALRVGQYGWSPSRVIATACTLIAACYVIGYVAAALRLRAPLPV 383 Query: 379 IASTNVLASFAILIVFLALLSPLADPARIAVADQLHRLAIGKTVPQRFDFHFLRFDGARF 438 +A+TNV SF IL +ALL+PLADPARIAVADQ+ RL G P + D+ FLRF R+ Sbjct: 384 LAATNVATSFVILASLVALLTPLADPARIAVADQIARLTAGSVAPNKIDYLFLRFGAGRY 443 Query: 439 GVQELKRLSEQKNGAYPVAVEEKARSALAGTNRWDREEFDEIAPDA--AKNIRV-HPAGR 495 G++ L+ L+ Q PVA + A AL RW +A A NI V P G Sbjct: 444 GIESLQALAAQPQ-TQPVAAQNAAE-ALEKRTRWAATPPQPPISNATRAANITVAQPPGA 501 Query: 496 QLPKEFIAQDWRNDKQRWSLPACMTRGDRQCDAYLVKPDPAGTEQVLVFDGNSMPALFAS 555 LP+EF+ W +++ + LP C+ D CDA LV D G ++++ +F S Sbjct: 502 SLPREFLETVWSKEQRFYLLPRCLVAAD-TCDAVLVDLDGDGIAEIILQPRAGPVGVFHS 560 Query: 556 SGVGAWQLAGKLMATPSCIDELKKTAERGSLNWQPPLQHDIDINGVHLRMQVEQTVTKCA 615 AW G L+ S ++ G P D+D+ G LR+ Sbjct: 561 IDNHAWSFLGTLVG--SACAGVRDALIAGRFKIAEPELKDLDLGGQRLRLTPSADCMS-G 617 Query: 616 PDELKK 621 P +KK Sbjct: 618 PISIKK 623 >ref|YP_001681990.1| hypothetical protein Caul_0355 [Caulobacter sp. K31] gb|ABZ69492.1| conserved hypothetical protein [Caulobacter sp. K31] Length = 584 Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 209/592 (35%), Positives = 323/592 (54%), Gaps = 32/592 (5%) Query: 27 LRVALGVAQGVLLYALYSSWNAKTGLAMQPLLFVPALMLAGFLPIIAVSGIGHLSRRNLL 86 +R+A G+AQG+LLY L+ + +K A Q ++ LM+ F P + +G+ L R L Sbjct: 21 IRLATGLAQGLLLYGLWQADKSKVWPATQREVYAALLMVVLFTPFVVFAGVSALRWRTLA 80 Query: 87 IWLAALAVILSGLGVYDAWRADLSSLLPSASTGSGMDGRPELLPSATLFLLAVAGLFIAQ 146 +W A++ +GLG Y W D P+A G++G L P + + A+ +FI Sbjct: 81 VWKGVAAIVAAGLGAYGVWSGD-----PAAQ---GVNG---LGPQTSFAIAAL--IFIGH 127 Query: 147 AMMLAGDADGRRIATYRSYFEMAWKLLVQLLFATLFTGLFWLVLETGNALFSLIKLDFLG 206 ++ D + RRIA + +YF++ WK VQ + + FTG FWL+L ALF LI +D + Sbjct: 128 HLIQPADMERRRIAQFPTYFDVTWKHGVQAVLSLGFTGAFWLLLFLAAALFKLIGVDAID 187 Query: 207 KLLERSWFNIPVTTLAFSSALHLSDVRPQIVAGIRKLLLTLLSWLLPIATIVIGAFLLSI 266 +L++ F P TT+ F++A+ L+DVR +V G+R + LTLL+WLLP+ ++ AFLL++ Sbjct: 188 RLIKHEAFAFPATTVMFAAAVQLTDVRANLVRGVRTVALTLLAWLLPLMALIAAAFLLTL 247 Query: 267 LATGLEPLWQTRRATHVLLGAAALLVVLINTVYQDGNHLTTRSHRFFTACLRVACLLPAP 326 TGLEPLW+TR AT +LL A A L++L N YQDG T ++ R+A +L P Sbjct: 248 PFTGLEPLWKTRSATAILLTADAFLILLTNAAYQDGTETTAVVLKW---AARLAGVLLVP 304 Query: 327 LVLLAVYSLGLRVAEYGWTVSRVAAATCALVAAMYAAGYALAALSARDKLQRIASTNVLA 386 + +LA Y L LR+ +YG + R+ AA C LVAA YA GYA+AA+ ++ + +TN+ Sbjct: 305 ITVLAAYGLSLRIGQYGLSPDRIIAAACVLVAAGYAVGYAVAAVRPGAWMKPLETTNIAM 364 Query: 387 SFAILIVFLALLSPLADPARIAVADQLHRLAIGKTVPQRFDFHFLRFDGARFGVQELKRL 446 +F + V LAL +P+ADP R++V +Q+ RL GK + FD+ FLRFD RFG + L+RL Sbjct: 365 AFVSVAVLLALFTPVADPRRLSVDNQVARLERGKVKAEAFDYQFLRFDAGRFGREALERL 424 Query: 447 SEQKNGAYPVAVEEKARSALAGTNRWDREEFDEIAPDAAKNIRVHPAGRQLPKEFIAQDW 506 +N V ++A +A A T+R E + P+ I +P G + P+ F+ Sbjct: 425 KASRN----AEVAKRAVAASAQTSRIYPSE--PVLPEQKPRITFYPKGARPPEGFLTAMI 478 Query: 507 RNDKQRWSLPACMTRGDRQCDAYLVKPDPAGTEQVLVFDGNSMPALFASSGVGAWQLAGK 566 + C++ G CDA L+ G +VL+ G + +F + G W+ G Sbjct: 479 AGPR----FGGCLS-GGVACDATLLDVTGDGQAEVLLTSGWEI-EVFGAGQDGGWRKLGS 532 Query: 567 LMATPSCIDELKKTAER-GSLNWQPPLQHDIDINGVHLRMQVEQTVTKCAPD 617 P C + A R G L+ P D+ + +R V + C P+ Sbjct: 533 FQ--PPCSGFDSRAAVRDGKLSAATPAIQDLVSSNGPMRF-VNPDIEACPPE 581 >ref|NP_900801.1| hypothetical protein CV_1131 [Chromobacterium violaceum ATCC 12472] gb|AAQ58806.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 574 Score = 283 bits (725), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 248/593 (41%), Positives = 333/593 (56%), Gaps = 32/593 (5%) Query: 26 RLRVALGVAQGVLLYALYSSWNAKTGLAMQPLLFVPALMLAGFLPIIAVSGIGHLSRRNL 85 R+R A+G+ QG+ LYALY + + L++ PLLF P L+ A FLP+ +G+G L L Sbjct: 5 RIRAAIGLLQGIALYALYRAADHGGWLSLHPLLFAPLLLAAAFLPLPYQTGLGALRPARL 64 Query: 86 LIWLAALAVILSGLGVYDAWRADLSSLLPSASTGSGMDGRPELLPSATLFLLAVAGLFIA 145 WLAALA+ ++ G +D WRA L R +L P A L LFIA Sbjct: 65 AAWLAALAIAVAAFGAHDRWRAGLEH-----------AARSDLTPGALATLGIALLLFIA 113 Query: 146 QAMMLAGDADGRRIATYRSYFEMAWKLLVQLLFATLFTGLFWLVLETGNALFSLIKLDFL 205 M+LAG+ + R A+Y +YF+ AWKL +QL+F+ LF G+FWLVL G LF+L+ +D L Sbjct: 114 WTMILAGEGERRWRASYPAYFDAAWKLGLQLMFSGLFVGVFWLVLNLGAELFALVGIDGL 173 Query: 206 GKLLERSWFNIPVTTLAFSSALHLSDVRPQIVAGIRKLLLTLLSWLLPIATIVIGAFLLS 265 +L+ + F IP + LA S+ LHLSDVRP I+ G+R LLLTLLSWLLP+ ++IGAFL Sbjct: 174 RRLIAEAEFAIPASALALSAGLHLSDVRPGIIQGLRSLLLTLLSWLLPLLVLLIGAFLAL 233 Query: 266 ILATGLEPLWQTRRATHVLLGAAALLVVLINTVYQDGNHLTTRSHRFFTACLRVACLLPA 325 + TGL+ LW+T A +LLGA+ LL+ L+N YQDG R LR ACLL A Sbjct: 234 LPFTGLDSLWKTGHAAALLLGASGLLIFLLNAAYQDG---VETPGRLIALSLRAACLLLA 290 Query: 326 PLVLLAVYSLGLRVAEYGWTVSRVAAATCALVAAMYAAGYALAALSARDKLQRIASTNVL 385 PL LA Y+L LRV +YGW+ RV AA+ + A YAAGY AL + L +AS N+ Sbjct: 291 PLQTLAAYALALRVGQYGWSPDRVFAASLVALGACYAAGYGWTALRRQAGLPGVASANIG 350 Query: 386 ASFAILIVFLALLSPLADPARIAVADQLHRLAIGKTVPQRFDFHFLRFDGARFGVQELKR 445 A++ L + ALL+PLADPARI+V+ QL RL G+ +RFDF FLR+ G R+G L R Sbjct: 351 AAWLSLALLAALLTPLADPARISVSSQLARLQAGRVAAERFDFDFLRYHGLRYGHAALLR 410 Query: 446 LSEQKNGAYPVAVEEKARSALAGTNRWDREEFDEIAPDAAKNIRVHPAGRQLPKEFIAQD 505 L + A AV KA AL+ R + P PA LP F+AQD Sbjct: 411 LRDDP--ALSGAVRRKASDALSEDKAKPRPPAQAVRPRG-------PAA--LPAGFLAQD 459 Query: 506 WRNDKQR-WSLPACMTRGDRQCDAYLVKPDPAGTEQVLVFDGNSMPA---LFASSGVGAW 561 W+ +R LP+C+ G CDAY+ G ++VL+ +PA LF + G W Sbjct: 460 WKQAAKRSGELPSCLLDGREACDAYVGDYSGGGKQEVLL--AEPLPARLSLFQRNAQGLW 517 Query: 562 QLAGKLMATPSCIDELKKTAERGSLNWQPPLQHDIDINGVHLRMQVEQTVTKC 614 L C L+ A G+ PP D+D G+ LR + T +C Sbjct: 518 TLVAAYDLPAGCPAPLEALAAGGAHA-LPPQLPDLDAGGLRLRPRYPYTPLEC 569