BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0003.0011.p (315 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777177.1| LysR family transcription regulator protein ... 568 e-160 ref|YP_004751417.1| hydrogen peroxide-inducible genes activator ... 558 e-157 ref|YP_001352038.1| OxyR hydrogen peroxide-inducible genes activ... 534 e-150 ref|YP_001098656.1| LysR family transcriptional regulator [Hermi... 525 e-147 ref|ZP_08275315.1| Hydrogen peroxide-inducible genes activator [... 509 e-142 >ref|YP_003777177.1| LysR family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ65269.1| LysR family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 315 Score = 568 bits (1463), Expect = e-160, Method: Compositional matrix adjust. Identities = 275/307 (89%), Positives = 289/307 (94%) Query: 1 MTLTELKYIVAVARQKHFGHAAEACFVAQPTLSVAIKKLEDELGVVIFERGGTEVSVTPL 60 MTLTELKYIVAVAR+KHFGHAAEACFVAQPTLSVAIKKLEDELGVVIFERGGTEVSVTPL Sbjct: 1 MTLTELKYIVAVAREKHFGHAAEACFVAQPTLSVAIKKLEDELGVVIFERGGTEVSVTPL 60 Query: 61 GAQIVAQAERVLEQTAAIKEIASQNKDPLSGPLRLGIIYTIGPYLLPSLVKTMIETVPQM 120 GAQIVAQAERVLEQTAAIKEIA+QNKDPLSGPLRLGIIYTIGPYLLPSLVKTMIE VPQM Sbjct: 61 GAQIVAQAERVLEQTAAIKEIANQNKDPLSGPLRLGIIYTIGPYLLPSLVKTMIERVPQM 120 Query: 121 PLILQENFTTRLIELLRQGELDAAIMALPFPEHGLIVQPLYDEEFVIALPRNHKWAERKE 180 PLILQENFTTRLIELLRQGELDAAIMALPFPEHGL V PLYDEEF++ALPR HKWAERKE Sbjct: 121 PLILQENFTTRLIELLRQGELDAAIMALPFPEHGLNVLPLYDEEFMVALPRQHKWAERKE 180 Query: 181 ITAQDLKTETMLLLGNGHCFRDQVLEVCPEMSRFSTAGDGIARTFEGSSLETIRHMVASG 240 I A++LK+ETMLLLGNGHCFRDQVLEVCPEMSRFST GDGIARTFEGSSLETIRHMV+SG Sbjct: 181 IDARELKSETMLLLGNGHCFRDQVLEVCPEMSRFSTNGDGIARTFEGSSLETIRHMVSSG 240 Query: 241 IGITVLPRASVTDMHTKDGTVRYVPFTMPVPSRRVVIAWRKSFTRHTAIDAVRKAVLSCA 300 IG+TVLPRAS+ D+ T+DG VRYVPF P PSRRVVIAWRKSFTR AIDAV +AVL+C Sbjct: 241 IGVTVLPRASIPDVDTRDGMVRYVPFVAPAPSRRVVIAWRKSFTRQAAIDAVHQAVLACK 300 Query: 301 LPGVDML 307 L GV ML Sbjct: 301 LNGVQML 307 >ref|YP_004751417.1| hydrogen peroxide-inducible genes activator [Collimonas fungivorans Ter331] gb|AEK60594.1| Hydrogen peroxide-inducible genes activator [Collimonas fungivorans Ter331] Length = 347 Score = 558 bits (1439), Expect = e-157, Method: Compositional matrix adjust. Identities = 269/315 (85%), Positives = 289/315 (91%) Query: 1 MTLTELKYIVAVARQKHFGHAAEACFVAQPTLSVAIKKLEDELGVVIFERGGTEVSVTPL 60 MTLTELKYIVAVAR KHFGHAAEACFVAQPTLSVAIKKLEDELGVVIFERGGTE+SVTPL Sbjct: 33 MTLTELKYIVAVARVKHFGHAAEACFVAQPTLSVAIKKLEDELGVVIFERGGTEISVTPL 92 Query: 61 GAQIVAQAERVLEQTAAIKEIASQNKDPLSGPLRLGIIYTIGPYLLPSLVKTMIETVPQM 120 GAQIVAQAERVLEQTA I+EIA+QNKDPL+GPLRLGIIYT+GPYLLP LVKTMIE VPQM Sbjct: 93 GAQIVAQAERVLEQTATIREIANQNKDPLAGPLRLGIIYTVGPYLLPPLVKTMIEQVPQM 152 Query: 121 PLILQENFTTRLIELLRQGELDAAIMALPFPEHGLIVQPLYDEEFVIALPRNHKWAERKE 180 PL+LQENFT RL+ELLRQGELDAAI+ALPFPEHGL+VQPLYDE FV+ALP++H WA R Sbjct: 153 PLVLQENFTVRLLELLRQGELDAAIIALPFPEHGLMVQPLYDEPFVVALPKHHAWANRSS 212 Query: 181 ITAQDLKTETMLLLGNGHCFRDQVLEVCPEMSRFSTAGDGIARTFEGSSLETIRHMVASG 240 I+AQDLK+ETMLLLGNGHCFRDQVLEVCPEMSRFSTAGDGIARTFEGSSLETIRHMVASG Sbjct: 213 ISAQDLKSETMLLLGNGHCFRDQVLEVCPEMSRFSTAGDGIARTFEGSSLETIRHMVASG 272 Query: 241 IGITVLPRASVTDMHTKDGTVRYVPFTMPVPSRRVVIAWRKSFTRHTAIDAVRKAVLSCA 300 IGITVLP ASV D+ KDG +RYVPFT P PSRRVVI WRKSFTRH AI+AV+KAVL C Sbjct: 273 IGITVLPLASVPDLDAKDGMLRYVPFTDPEPSRRVVIVWRKSFTRHAAIEAVQKAVLDCG 332 Query: 301 LPGVDMLHEAELTEG 315 L GV +LH+A EG Sbjct: 333 LKGVTLLHDALAVEG 347 >ref|YP_001352038.1| OxyR hydrogen peroxide-inducible genes activator [Janthinobacterium sp. Marseille] gb|ABR88853.1| OxyR hydrogen peroxide-inducible genes activator [Janthinobacterium sp. Marseille] Length = 331 Score = 534 bits (1376), Expect = e-150, Method: Compositional matrix adjust. Identities = 253/315 (80%), Positives = 284/315 (90%) Query: 1 MTLTELKYIVAVARQKHFGHAAEACFVAQPTLSVAIKKLEDELGVVIFERGGTEVSVTPL 60 MTLTELKYIVAVAR+KHFGHAAEACFVAQPTLSVAIKKLEDELGV +FERGG+E+S+TPL Sbjct: 17 MTLTELKYIVAVAREKHFGHAAEACFVAQPTLSVAIKKLEDELGVTLFERGGSEISMTPL 76 Query: 61 GAQIVAQAERVLEQTAAIKEIASQNKDPLSGPLRLGIIYTIGPYLLPSLVKTMIETVPQM 120 GAQIVAQAERVLEQTAAIKEIA QNKDPL GP RLGIIYTI PYLLP LVKT+IE VPQM Sbjct: 77 GAQIVAQAERVLEQTAAIKEIAKQNKDPLVGPFRLGIIYTIAPYLLPPLVKTIIERVPQM 136 Query: 121 PLILQENFTTRLIELLRQGELDAAIMALPFPEHGLIVQPLYDEEFVIALPRNHKWAERKE 180 PL+LQENFT +L+ELLRQGELDAAI+ALPFP+ GL+VQP+YDE FV+A+P++HKWA R Sbjct: 137 PLVLQENFTVKLLELLRQGELDAAIVALPFPDQGLLVQPVYDEPFVVAVPKHHKWANRDS 196 Query: 181 ITAQDLKTETMLLLGNGHCFRDQVLEVCPEMSRFSTAGDGIARTFEGSSLETIRHMVASG 240 ++ DLK+ETMLLLGNGHCFRDQVLEVCPEMSRFST+GDGIARTFEGSSLETIRHMVASG Sbjct: 197 VSTDDLKSETMLLLGNGHCFRDQVLEVCPEMSRFSTSGDGIARTFEGSSLETIRHMVASG 256 Query: 241 IGITVLPRASVTDMHTKDGTVRYVPFTMPVPSRRVVIAWRKSFTRHTAIDAVRKAVLSCA 300 IGITVLP+AS+ DM KDG +RY+PFT P PSRRVV+ WRKSFTR AI+AVR+A+LSC Sbjct: 257 IGITVLPQASIPDMQAKDGMLRYIPFTQPGPSRRVVLVWRKSFTRGAAIEAVRQALLSCD 316 Query: 301 LPGVDMLHEAELTEG 315 L GV ML + L+E Sbjct: 317 LHGVTMLPDEPLSEA 331 >ref|YP_001098656.1| LysR family transcriptional regulator [Herminiimonas arsenicoxydans] emb|CAL60527.1| putative LysR-family transcriptional regulator [Herminiimonas arsenicoxydans] Length = 315 Score = 525 bits (1351), Expect = e-147, Method: Compositional matrix adjust. Identities = 249/314 (79%), Positives = 279/314 (88%) Query: 1 MTLTELKYIVAVARQKHFGHAAEACFVAQPTLSVAIKKLEDELGVVIFERGGTEVSVTPL 60 MTLTELKYIVAVAR+KHFGHAAEAC VAQPTLSVAIKKLEDELGV +FERGG+E+S+TPL Sbjct: 1 MTLTELKYIVAVAREKHFGHAAEACHVAQPTLSVAIKKLEDELGVTLFERGGSEISMTPL 60 Query: 61 GAQIVAQAERVLEQTAAIKEIASQNKDPLSGPLRLGIIYTIGPYLLPSLVKTMIETVPQM 120 G QIVAQAERVLEQTAAIKEIA QNKDPL GP RLGIIYTI PYLLP LVK MIE VPQM Sbjct: 61 GVQIVAQAERVLEQTAAIKEIAKQNKDPLVGPFRLGIIYTIAPYLLPPLVKAMIERVPQM 120 Query: 121 PLILQENFTTRLIELLRQGELDAAIMALPFPEHGLIVQPLYDEEFVIALPRNHKWAERKE 180 PL+LQENFT +L+E LRQGE+DAAI+ALP P+ GL+VQP+YDE FV+A+P++H WAER Sbjct: 121 PLVLQENFTVKLLEQLRQGEIDAAIVALPIPDQGLLVQPVYDEPFVVAVPKHHPWAERSS 180 Query: 181 ITAQDLKTETMLLLGNGHCFRDQVLEVCPEMSRFSTAGDGIARTFEGSSLETIRHMVASG 240 +T +LK+ETMLLLGNGHCFRDQVLEVCPEMSRFST+GDGIARTFEGSSLETIRHMVASG Sbjct: 181 VTTDNLKSETMLLLGNGHCFRDQVLEVCPEMSRFSTSGDGIARTFEGSSLETIRHMVASG 240 Query: 241 IGITVLPRASVTDMHTKDGTVRYVPFTMPVPSRRVVIAWRKSFTRHTAIDAVRKAVLSCA 300 IGITVLP+ASV DMHT DG +RY+PF P PSRRVV+ WRKSFTR AI+ VR+A+LSC Sbjct: 241 IGITVLPQASVPDMHTTDGMLRYIPFVQPGPSRRVVLVWRKSFTRGVAIEEVRQALLSCD 300 Query: 301 LPGVDMLHEAELTE 314 LPGV ML + L+E Sbjct: 301 LPGVTMLPDEPLSE 314 >ref|ZP_08275315.1| Hydrogen peroxide-inducible genes activator [Oxalobacteraceae bacterium IMCC9480] gb|EGF31219.1| Hydrogen peroxide-inducible genes activator [Oxalobacteraceae bacterium IMCC9480] Length = 315 Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust. Identities = 248/315 (78%), Positives = 275/315 (87%) Query: 1 MTLTELKYIVAVARQKHFGHAAEACFVAQPTLSVAIKKLEDELGVVIFERGGTEVSVTPL 60 MTLTELKYIVAV+RQ+HFGHAAE+CFVAQPTLSVAIKKLEDELGV+IFERGG+E+S+TPL Sbjct: 1 MTLTELKYIVAVSRQRHFGHAAESCFVAQPTLSVAIKKLEDELGVIIFERGGSEISMTPL 60 Query: 61 GAQIVAQAERVLEQTAAIKEIASQNKDPLSGPLRLGIIYTIGPYLLPSLVKTMIETVPQM 120 GA IVAQAE VLEQTAAIKEIA QNKDPL+GP RLGIIYTI PYLLP+LVKTMI TVPQM Sbjct: 61 GALIVAQAEHVLEQTAAIKEIAKQNKDPLAGPFRLGIIYTIAPYLLPTLVKTMISTVPQM 120 Query: 121 PLILQENFTTRLIELLRQGELDAAIMALPFPEHGLIVQPLYDEEFVIALPRNHKWAERKE 180 PLILQE FT +L+E++RQGELDAAI+ALPF + GL VQ LYDE FV+ALP +H WA R Sbjct: 121 PLILQEQFTVKLLEMVRQGELDAAIIALPFNDTGLSVQALYDEPFVVALPAHHPWASRDL 180 Query: 181 ITAQDLKTETMLLLGNGHCFRDQVLEVCPEMSRFSTAGDGIARTFEGSSLETIRHMVASG 240 I++++LKTETMLLLGNGHCFRDQVLEVCPEMSRF+T DGIARTFEGSSLETIRHMVASG Sbjct: 181 ISSEELKTETMLLLGNGHCFRDQVLEVCPEMSRFATGNDGIARTFEGSSLETIRHMVASG 240 Query: 241 IGITVLPRASVTDMHTKDGTVRYVPFTMPVPSRRVVIAWRKSFTRHTAIDAVRKAVLSCA 300 IGITVLP+ASV DM DG +RYVP PVPSRRVVI WRKSFTR AI+AVR AVL C Sbjct: 241 IGITVLPQASVPDMQPVDGLLRYVPLAPPVPSRRVVIVWRKSFTRLAAIEAVRAAVLRCE 300 Query: 301 LPGVDMLHEAELTEG 315 L GV ML +A +G Sbjct: 301 LHGVTMLPDASAIDG 315