BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0003.0005.p (154 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_047609.1| hypothetical protein ACIAD3089 [Acinetobacter s... 147 6e-34 ref|ZP_04660043.1| YjgF family translation initiation inhibitor ... 142 2e-32 ref|YP_001708111.1| hypothetical protein ABSDF2963 [Acinetobacte... 142 2e-32 ref|YP_262291.2| endoribonuclease L-PSP family protein [Pseudomo... 140 6e-32 ref|YP_459709.1| translation initiation inhibitor [Erythrobacter... 140 7e-32 >ref|YP_047609.1| hypothetical protein ACIAD3089 [Acinetobacter sp. ADP1] emb|CAG69787.1| conserved hypothetical protein [Acinetobacter sp. ADP1] Length = 163 Score = 147 bits (371), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 67/143 (46%), Positives = 101/143 (70%) Query: 10 LGIVLPASAAPGAQYATGVVHQGLAWISGQLPRDGDRVLVSGKLGREVSIEDARMGARAA 69 LG G +Y + + H GLA++SGQ+PR D+V V GK+G +V + A++ A + Sbjct: 14 LGYDFSGDMKIGGKYTSLIEHAGLAYMSGQIPRVEDKVQVCGKVGFDVDLSQAQLAASIS 73 Query: 70 LIRALAALRDTVGDLQRIDKILRLNVYVNSTEDFSQQSAVADGASALIYELFGPEQGRHA 129 +RALA L+ G LQ ++K+L++NV+++ST DF+QQS VADGAS ++YE+ G + G+H Sbjct: 74 TMRALAILKQHYGTLQVVEKVLQMNVFIHSTADFTQQSEVADGASEILYEILGSDTGQHT 133 Query: 130 RTSVGVAQLPRNAAVELDIVVAL 152 RTSV V QLP+NA+VE++ +VAL Sbjct: 134 RTSVSVCQLPKNASVEINFIVAL 156 >ref|ZP_04660043.1| YjgF family translation initiation inhibitor [Acinetobacter baumannii AB900] Length = 157 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 68/145 (46%), Positives = 97/145 (66%) Query: 8 TELGIVLPASAAPGAQYATGVVHQGLAWISGQLPRDGDRVLVSGKLGREVSIEDARMGAR 67 + LG G +Y + + H GL +ISGQ+PR GD V + GK+G +V + DA++ A Sbjct: 12 SRLGYDFSGDIKIGGKYTSLIEHAGLVFISGQIPRVGDTVQICGKVGLDVDLSDAQLAAS 71 Query: 68 AALIRALAALRDTVGDLQRIDKILRLNVYVNSTEDFSQQSAVADGASALIYELFGPEQGR 127 + +RALA L+ G L I K+L++NV+V+ST F QQS VADGAS ++YE+ G + GR Sbjct: 72 ISTMRALAILKQHYGTLDVIGKVLQMNVFVHSTSSFIQQSEVADGASEILYEILGLDTGR 131 Query: 128 HARTSVGVAQLPRNAAVELDIVVAL 152 H RTSV V QLP+NA+VE++ + AL Sbjct: 132 HTRTSVSVYQLPKNASVEINFIFAL 156 >ref|YP_001708111.1| hypothetical protein ABSDF2963 [Acinetobacter baumannii SDF] ref|YP_001845222.1| YjgF family translation initiation inhibitor [Acinetobacter baumannii ACICU] ref|ZP_05828312.1| YjgF family translation initiation inhibitor [Acinetobacter baumannii ATCC 19606] ref|ZP_08441976.1| endoribonuclease L-PSP [Acinetobacter baumannii 6014059] emb|CAP02252.1| conserved hypothetical protein [Acinetobacter baumannii] gb|ACC55875.1| putative translation initiation inhibitor, yjgF family [Acinetobacter baumannii ACICU] gb|EEX03447.1| YjgF family translation initiation inhibitor [Acinetobacter baumannii ATCC 19606] gb|ADX02232.1| YjgF family translation initiation inhibitor [Acinetobacter baumannii 1656-2] gb|ADX91029.1| YjgF family translation initiation inhibitor [Acinetobacter baumannii TCDC-AB0715] gb|EGJ68674.1| endoribonuclease L-PSP [Acinetobacter baumannii 6014059] gb|EGK48055.1| YjgF family translation initiation inhibitor [Acinetobacter baumannii AB210] gb|EGT89510.1| YjgF family translation initiation inhibitor [Acinetobacter baumannii ABNIH2] gb|EGT90991.1| YjgF family translation initiation inhibitor [Acinetobacter baumannii ABNIH1] gb|EGT92653.1| YjgF family translation initiation inhibitor [Acinetobacter baumannii ABNIH3] gb|EGU02453.1| YjgF family translation initiation inhibitor [Acinetobacter baumannii ABNIH4] gb|AEP05056.1| conserve hypothetical protein [Acinetobacter baumannii MDR-ZJ06] Length = 157 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 68/145 (46%), Positives = 97/145 (66%) Query: 8 TELGIVLPASAAPGAQYATGVVHQGLAWISGQLPRDGDRVLVSGKLGREVSIEDARMGAR 67 + LG G +Y + + H GL +ISGQ+PR GD V + GK+G +V + DA++ A Sbjct: 12 SRLGYDFSGDIKIGGKYTSLIEHAGLVFISGQIPRVGDTVQICGKVGLDVDLSDAQLAAS 71 Query: 68 AALIRALAALRDTVGDLQRIDKILRLNVYVNSTEDFSQQSAVADGASALIYELFGPEQGR 127 + +RALA L+ G L I K+L++NV+V+ST F QQS VADGAS ++YE+ G + GR Sbjct: 72 ISTMRALAILKQHYGTLDVIGKVLQMNVFVHSTSSFIQQSEVADGASEILYEILGLDTGR 131 Query: 128 HARTSVGVAQLPRNAAVELDIVVAL 152 H RTSV V QLP+NA+VE++ + AL Sbjct: 132 HTRTSVSVYQLPKNASVEINFIFAL 156 >ref|YP_262291.2| endoribonuclease L-PSP family protein [Pseudomonas fluorescens Pf-5] gb|AAY94433.2| endoribonuclease L-PSP family protein [Pseudomonas fluorescens Pf-5] Length = 164 Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 71/132 (53%), Positives = 95/132 (71%), Gaps = 1/132 (0%) Query: 21 GAQYATGVVHQGLAWISGQLPRDGDRVLVSGKLGREVSIEDARMGARAALIRALAALRDT 80 G Y V + ++SGQ+PR + V+V G++G E S+E AR GA+ +RALA L Sbjct: 27 GGNYVPAVRNGDEVYVSGQIPRIDNTVMVVGRVGAETSLEQARHGAQICTLRALAILEQM 86 Query: 81 VGDLQRIDKILRLNVYVNSTEDFSQQSAVADGASALIYELFGPEQGRHARTSVGVAQLPR 140 +GDLQRI +ILR+NVYV S DF+QQS VADGASA++Y +F + G H RTSVGV QLP+ Sbjct: 87 LGDLQRIKRILRINVYVQSAADFTQQSEVADGASAVLYSIFA-DAGVHTRTSVGVYQLPK 145 Query: 141 NAAVELDIVVAL 152 NA+VE+D++VAL Sbjct: 146 NASVEVDMIVAL 157 >ref|YP_459709.1| translation initiation inhibitor [Erythrobacter litoralis HTCC2594] gb|ABC64912.1| putative translation initiation inhibitor [Erythrobacter litoralis HTCC2594] Length = 152 Score = 140 bits (353), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 77/153 (50%), Positives = 106/153 (69%), Gaps = 4/153 (2%) Query: 1 MNLDQRLTELGIVLPASAAPGAQYATGVVHQGLAWISGQLPR-DGDRVLVSGKLGREVSI 59 M+++ RL ELGIVLP +AAP A Y VV G A ISGQLP DG LV+G+LG +VS+ Sbjct: 1 MSIEARLNELGIVLPEAAAPVASYVPVVVQGGFAHISGQLPFIDGK--LVTGRLGEDVSL 58 Query: 60 EDARMGARAALIRALAALRDTVGDLQRIDKILRLNVYVNSTEDFSQQSAVADGASALIYE 119 +D ARA + LA L+ + L ++++I++L +VNST DF Q VA+GAS L+++ Sbjct: 59 DDGTAAARACGLMILAQLKSALVPLDKVERIVKLGAFVNSTADFIDQPKVANGASELMFD 118 Query: 120 LFGPEQGRHARTSVGVAQLPRNAAVELDIVVAL 152 +FG E+GRHAR +VGV LP AAVE+D ++AL Sbjct: 119 VFG-EKGRHARAAVGVPALPLGAAVEVDAIIAL 150