BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0750.p         (150 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_610223.1| hypothetical protein PSEEN4782 [Pseudomonas ent...   150   6e-35
ref|YP_001747656.1| cupin 2 domain-containing protein [Pseudomon...   138   2e-31
ref|ZP_08138801.1| cupin 2 domain-containing protein [Pseudomona...   114   4e-24

>ref|YP_610223.1| hypothetical protein PSEEN4782 [Pseudomonas entomophila L48]
 emb|CAK17440.1| hypothetical protein; putative signal peptide [Pseudomonas
           entomophila L48]
          Length = 145

 Score =  150 bits (379), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 80/144 (55%), Positives = 99/144 (68%), Gaps = 7/144 (4%)

Query: 9   LLLAAAGASFAGNNTKAGKPVA--QPLVSFP-AADLKWRELPGT-GGIKVADVRGSITGK 64
           L L  AG + AG    AG  +A  +  VS P +A L+W+E+ GT G ++ A+V G + GK
Sbjct: 4   LKLMIAGLTLAG---LAGTAIAAGEHRVSVPDSATLQWQEVSGTQGAVRYANVEGDLFGK 60

Query: 65  GAYDAFVIFPAGKDNPYHLHTQNLPTVVLKGTFYAVIDGKRIEYPAGSFYNLPASMPHYS 124
           G Y A+V+F  G DN  H H+Q LPTVVL GTFYAVIDGKRIEYPAG++Y LPA++ H S
Sbjct: 61  GPYSAYVLFRKGTDNGLHTHSQTLPTVVLSGTFYAVIDGKRIEYPAGAYYKLPANLVHES 120

Query: 125 GCAKGEDCLLFQYQADHFDLVPVE 148
           GC    DCLLFQYQAD FDL  V+
Sbjct: 121 GCTAAADCLLFQYQADAFDLNAVK 144


>ref|YP_001747656.1| cupin 2 domain-containing protein [Pseudomonas putida W619]
 gb|ACA71287.1| Cupin 2 conserved barrel domain protein [Pseudomonas putida W619]
          Length = 144

 Score =  138 bits (348), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/112 (58%), Positives = 78/112 (69%), Gaps = 1/112 (0%)

Query: 38  AADLKWRELPGT-GGIKVADVRGSITGKGAYDAFVIFPAGKDNPYHLHTQNLPTVVLKGT 96
           +A LKW+E+P T G +  A+V G I GKG Y A+V F  G DN  H H+Q LPTVVL GT
Sbjct: 32  SAKLKWQEVPNTQGAVSYANVEGDIFGKGPYSAYVRFRKGTDNGLHQHSQALPTVVLSGT 91

Query: 97  FYAVIDGKRIEYPAGSFYNLPASMPHYSGCAKGEDCLLFQYQADHFDLVPVE 148
           FYAVI+GKR EY AG++Y LP  + H SGC    DCLLFQYQ D FDL PV+
Sbjct: 92  FYAVIEGKRTEYSAGAYYKLPVDLVHESGCTGAADCLLFQYQGDAFDLKPVK 143


>ref|ZP_08138801.1| cupin 2 domain-containing protein [Pseudomonas sp. TJI-51]
 gb|EGB99904.1| cupin 2 domain-containing protein [Pseudomonas sp. TJI-51]
          Length = 117

 Score =  114 bits (286), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 60/109 (55%), Positives = 72/109 (66%), Gaps = 2/109 (1%)

Query: 16  ASFAGNNTKAGKPVAQPLVSFPA-ADLKWRELPGT-GGIKVADVRGSITGKGAYDAFVIF 73
           A+ A      G   AQP+VS      L W+++P T G +  A+V G I GKG Y A+V F
Sbjct: 9   AALALGTLTVGANAAQPIVSVTDHTALNWQDVPNTNGAVSFANVEGDIFGKGPYSAYVEF 68

Query: 74  PAGKDNPYHLHTQNLPTVVLKGTFYAVIDGKRIEYPAGSFYNLPASMPH 122
             G DN  H H+Q LPTVVLKGTFYAVIDGKRIEYPAG++YNLPA + H
Sbjct: 69  SKGTDNGLHQHSQALPTVVLKGTFYAVIDGKRIEYPAGAYYNLPAGLIH 117