BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0744.p (226 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777720.1| multiple antibiotic resistance protein [Herb... 341 5e-92 ref|YP_001353588.1| multiple antibiotic resistance protein MarC ... 313 1e-83 ref|YP_001099747.1| putative multiple antibiotic resistance prot... 304 5e-81 ref|NP_902399.1| multiple antibiotic resistance protein MarC [Ch... 183 2e-44 ref|YP_002287112.1| hypothetical protein OCAR_4096 [Oligotropha ... 173 2e-41 >ref|YP_003777720.1| multiple antibiotic resistance protein [Herbaspirillum seropedicae SmR1] gb|ADJ65812.1| multiple antibiotic resistance protein [Herbaspirillum seropedicae SmR1] Length = 229 Score = 341 bits (875), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 175/224 (78%), Positives = 201/224 (89%), Gaps = 1/224 (0%) Query: 1 MLIIFLKAVLLIPVTLLPILNPLGIAPVFANLLGDVPRQIENRVARQVAINCWFLLVGAI 60 M I+FLKAV+LIPVTLLPILNPLGIAPVFANLLG+V R E R+ARQVAINCWF+LV AI Sbjct: 1 MFILFLKAVVLIPVTLLPILNPLGIAPVFANLLGNVSRSTEKRIARQVAINCWFMLVAAI 60 Query: 61 FIGSHVLAFFGISLPIVRIGGGILVAVSGWKLLSDGGNDAAIPKQVAKAYDDE-SNEELK 119 FIGSHVL FFGISLPIVR+GGG+LVAVSGWKLL+D D++IP QVAK YD++ ++E+K Sbjct: 61 FIGSHVLTFFGISLPIVRVGGGLLVAVSGWKLLNDNSQDSSIPTQVAKTYDEDLPDDEIK 120 Query: 120 ARSFYPISFPLTVGPGTIAASITLGANTPARLVDWVMSIGSAALGSALTVLVIYLCYRSA 179 ARSFYP+SFPLTVGPGTIAASITLGANTP RL+DWV+S+GSAALG+ALT LVI+LCY A Sbjct: 121 ARSFYPMSFPLTVGPGTIAASITLGANTPTRLLDWVISVGSAALGAALTALVIFLCYNYA 180 Query: 180 NKIVSLLGRLGTMVVLRLSAFILLCIGIQIFWSGFTGLLVETGM 223 +K+V L+GRLGTMVVLRLSAFILLCIGIQIFWSG + LL E G+ Sbjct: 181 HKLVHLMGRLGTMVVLRLSAFILLCIGIQIFWSGMSALLAEAGI 224 >ref|YP_001353588.1| multiple antibiotic resistance protein MarC [Janthinobacterium sp. Marseille] gb|ABR90356.1| multiple antibiotic resistance protein MarC [Janthinobacterium sp. Marseille] Length = 226 Score = 313 bits (802), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 155/224 (69%), Positives = 192/224 (85%), Gaps = 2/224 (0%) Query: 1 MLIIFLKAVLLIPVTLLPILNPLGIAPVFANLLGDVPRQIENRVARQVAINCWFLLVGAI 60 MLI+F KA +L+P+T+LPI+NP G APVFA+LLG+V R +E ++ARQVA+NC+FLL+GA+ Sbjct: 1 MLILFFKAAILVPITMLPIINPFGNAPVFASLLGNVSRDVEKKLARQVALNCFFLLLGAM 60 Query: 61 FIGSHVLAFFGISLPIVRIGGGILVAVSGWKLLSDGGNDAAIPKQVAKA-YDDESNEELK 119 FIGSHVL FFGIS+PIVRI GG+LVA + W+LL+D G DA I QVA A + S+EE K Sbjct: 61 FIGSHVLMFFGISIPIVRISGGLLVAFTAWRLLNDNGQDA-IRTQVATAPMEAWSDEEFK 119 Query: 120 ARSFYPISFPLTVGPGTIAASITLGANTPARLVDWVMSIGSAALGSALTVLVIYLCYRSA 179 RSFYPISFPLTVGPG IAASITLGA+TPARL+D V+S+GSAA+G+A+T VI+LCY SA Sbjct: 120 VRSFYPISFPLTVGPGAIAASITLGASTPARLLDQVISLGSAAVGAAMTAFVIWLCYNSA 179 Query: 180 NKIVSLLGRLGTMVVLRLSAFILLCIGIQIFWSGFTGLLVETGM 223 NK+V +LGRLGTMV+LRLSAFILLCIG++IFW+G GLLVE G+ Sbjct: 180 NKMVKMLGRLGTMVMLRLSAFILLCIGVEIFWTGVVGLLVEAGI 223 >ref|YP_001099747.1| putative multiple antibiotic resistance protein MarC [Herminiimonas arsenicoxydans] emb|CAL61620.1| putative multiple antibiotic resistance protein MarC [Herminiimonas arsenicoxydans] Length = 226 Score = 304 bits (779), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 152/223 (68%), Positives = 182/223 (81%) Query: 1 MLIIFLKAVLLIPVTLLPILNPLGIAPVFANLLGDVPRQIENRVARQVAINCWFLLVGAI 60 MLI+F KA +LIP+TL+PILNP G A +FA+L GD+ R E R+ARQVAINC+ +L+G + Sbjct: 1 MLILFFKAAILIPITLVPILNPFGNAAIFASLAGDIDRDAEKRLARQVAINCFVMLLGTM 60 Query: 61 FIGSHVLAFFGISLPIVRIGGGILVAVSGWKLLSDGGNDAAIPKQVAKAYDDESNEELKA 120 FIGSHVL FFGISLPIVRIGGGILVA +GW+LL+D G D + +K + S ++ K Sbjct: 61 FIGSHVLMFFGISLPIVRIGGGILVAATGWRLLNDKGQDDIRTQVASKPREVWSEDDFKV 120 Query: 121 RSFYPISFPLTVGPGTIAASITLGANTPARLVDWVMSIGSAALGSALTVLVIYLCYRSAN 180 RSFYPISFPLTVGPGTIAASITLGA+ P+RL + +SIGSAALG+A+T LVI+LCYR AN Sbjct: 121 RSFYPISFPLTVGPGTIAASITLGASAPSRLSNLFVSIGSAALGAAMTALVIFLCYRYAN 180 Query: 181 KIVSLLGRLGTMVVLRLSAFILLCIGIQIFWSGFTGLLVETGM 223 K+V LLGRLGTMVVLRLSAFILLCIGI+IFW G GLL E G+ Sbjct: 181 KMVRLLGRLGTMVVLRLSAFILLCIGIEIFWQGMLGLLAEAGI 223 >ref|NP_902399.1| multiple antibiotic resistance protein MarC [Chromobacterium violaceum ATCC 12472] gb|AAQ60399.1| probable multiple antibiotic resistance protein MarC [Chromobacterium violaceum ATCC 12472] Length = 233 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 94/221 (42%), Positives = 148/221 (66%), Gaps = 13/221 (5%) Query: 1 MLIIFLKAVLLIPVTLLPILNPLGIAPVFANLLGDVPRQIENRVARQVAINCWFLLVGAI 60 +L F+ L + LLPI+NP G+ P+F ++ Q +AR++AI C LLVG++ Sbjct: 3 LLSTFITKFLFVMAALLPIMNPPGLVPIFISMTARNTPQQRRYLARRIAIYCALLLVGSM 62 Query: 61 FIGSHVLAFFGISLPIVRIGGGILVAVSGWKLLSDGGNDAAIPKQVAKAYDDESNEELKA 120 F+G +VL+FFG+SLP+V++ GG+L+ + W++L+D +++ P A+ +S ELK Sbjct: 63 FVGGYVLSFFGVSLPVVQMSGGLLITFAAWRMLNDTPAESSQPS--AEQARVDSQAELKQ 120 Query: 121 RSFYPISFPLTVGPGTIAASITLGANTPAR---LVDWVMS----IGSAALGSALTVLVIY 173 R+FYP++FPLTVGPG+++ +IT+GA LV +V+S + + +GS L +Y Sbjct: 121 RAFYPLTFPLTVGPGSVSVAITIGATLTGSGKGLVRFVISPIAGLSAVLVGSTL----VY 176 Query: 174 LCYRSANKIVSLLGRLGTMVVLRLSAFILLCIGIQIFWSGF 214 LCY +A+K++ LG+ G++V LRLSAFILLC+G+QI W GF Sbjct: 177 LCYANADKLLRYLGQTGSVVFLRLSAFILLCLGVQIMWDGF 217 >ref|YP_002287112.1| hypothetical protein OCAR_4096 [Oligotropha carboxidovorans OM5] ref|YP_004631380.1| antibiotic resistance protein [Oligotropha carboxidovorans OM5] gb|ACI91247.1| putative membrane protein [Oligotropha carboxidovorans OM5] gb|AEI01564.1| putative antibiotic resistance protein [Oligotropha carboxidovorans OM4] gb|AEI05139.1| putative antibiotic resistance protein [Oligotropha carboxidovorans OM5] Length = 228 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 99/218 (45%), Positives = 136/218 (62%), Gaps = 11/218 (5%) Query: 6 LKAVLLIPVTLLPILNPLGIAPVFANLLGDVPRQIENRVARQVAINCWFLLVGAIFIGSH 65 + A LL+ L P++NP+G AP+F L P+ +AR VAIN + LL+ ++FIGSH Sbjct: 8 VNAFLLVYAALFPVINPVGGAPIFLRLTNRTPKARLPSLARGVAINSFVLLLCSLFIGSH 67 Query: 66 VLAFFGISLPIVRIGGGILVAVSGWKLLSDGGNDAAIPKQVAKAYDDESNEELKARSFYP 125 VL FFGI+LP++RI GG++VA GW+LL G + + D + E + +FYP Sbjct: 68 VLVFFGITLPVLRIAGGLVVAALGWRLLHQGDD--------LEGRDQPAPREKEVDAFYP 119 Query: 126 ISFPLTVGPGTIAASITLGANTPARLVD---WVMSIGSAALGSALTVLVIYLCYRSANKI 182 ++ PLTVGPG+I+ +ITLG+ P+ VD G AA G A IY+CYR A I Sbjct: 120 LTMPLTVGPGSISVAITLGSQRPSSAVDLAQLAALGGGAATGLAAIAATIYVCYRFAGNI 179 Query: 183 VSLLGRLGTMVVLRLSAFILLCIGIQIFWSGFTGLLVE 220 V++LG GT V++RLSAF+L CIGIQI W G LL + Sbjct: 180 VTVLGERGTNVMMRLSAFLLFCIGIQIIWGGLRTLLPQ 217