BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0741.p (423 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777717.1| hypothetical protein Hsero_4341 [Herbaspiril... 707 0.0 ref|YP_004754794.1| hypothetical protein CFU_4149 [Collimonas fu... 685 0.0 ref|YP_368991.1| hypothetical protein Bcep18194_A4752 [Burkholde... 673 0.0 ref|YP_001119407.1| hypothetical protein Bcep1808_1565 [Burkhold... 672 0.0 ref|YP_002230792.1| hypothetical protein BCAL1664 [Burkholderia ... 672 0.0 >ref|YP_003777717.1| hypothetical protein Hsero_4341 [Herbaspirillum seropedicae SmR1] gb|ADJ65809.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 422 Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/422 (81%), Positives = 377/422 (89%), Gaps = 1/422 (0%) Query: 3 LLHQIIDRRLAGKNKSIANRERFLRRFRSDIRRSVTEAVRDRSIKDIESSKSITIPRKDI 62 +LHQIIDRRLAGKNKSIANRERFLRRF+ I+RSV +AVRDRSI D+E SKSI+IPRKD+ Sbjct: 1 MLHQIIDRRLAGKNKSIANRERFLRRFKGHIQRSVADAVRDRSITDLEKSKSISIPRKDV 60 Query: 63 SEPAFHHGRGGKREIVHPGNQDYLQGDRIPRRSGGSGDGGST-ASNEGESQDEFTFELSR 121 SEP FHHG+GGKRE VHPGNQDYLQGDRIPR++GGSG GG + ASN+GE QD+FTFEL+R Sbjct: 61 SEPFFHHGKGGKREAVHPGNQDYLQGDRIPRQNGGSGGGGGSSASNDGEGQDDFTFELTR 120 Query: 122 EEFMQYFFEDLELPRLIQTNLMSIPNWKNMRAGYSVDGSPANIDIVRSLRSSLGRRIALG 181 EEFM YFFEDLELPRL++TNL+ +PNWKN RAGYSVDGSP NID+VRSLRSSLGRRIALG Sbjct: 121 EEFMHYFFEDLELPRLVETNLLQVPNWKNQRAGYSVDGSPNNIDVVRSLRSSLGRRIALG 180 Query: 182 GPLVAKLRELEEQLCALQNDPGDRRSEILLLEEEIHHLKGRIWRIPFIDPFDLRYVNRVR 241 GPL +L EE L ++ P + R++I LLEEEI L+ RI RIPFIDPFDLRYVNRVR Sbjct: 181 GPLQRQLDAAEEALTEMKRKPDEHRADIKLLEEEIRQLRARILRIPFIDPFDLRYVNRVR 240 Query: 242 QPQPSSRAVMFCVMDVSGSMDEQRKDLSKRFFILLYLFLMRNYEHIEVVFIRHHTRADEV 301 QPQPSSRAVMFCVMDVSGSMDEQRKDLSKRFFILLYLFL RNYEHIEVVFIRHHTRADEV Sbjct: 241 QPQPSSRAVMFCVMDVSGSMDEQRKDLSKRFFILLYLFLTRNYEHIEVVFIRHHTRADEV 300 Query: 302 DEETFFHSQESGGTVVSSALELMQDIIRTRYPSNEWNIYGAQASDGDNWNDDSPKCRSIL 361 DE TFFHSQESGGTVVSSALELM DII RY +EWNIYGAQASDGDNWNDDSPKCR +L Sbjct: 301 DENTFFHSQESGGTVVSSALELMHDIITKRYSPSEWNIYGAQASDGDNWNDDSPKCRELL 360 Query: 362 EEAILPMCRYFAYIQVAEPEQNLWTEYTQLLHEHPHFAMKKVQSSSEIYPVFRELFEKQV 421 E AILP+ RYFAYIQVAEPEQNLWTEY QL+ HPHFAMKKVQS++EIYPVFRELFEKQV Sbjct: 361 ESAILPLTRYFAYIQVAEPEQNLWTEYMQLIESHPHFAMKKVQSAAEIYPVFRELFEKQV 420 Query: 422 HA 423 HA Sbjct: 421 HA 422 >ref|YP_004754794.1| hypothetical protein CFU_4149 [Collimonas fungivorans Ter331] gb|AEK63971.1| protein of unknown function DUF444 [Collimonas fungivorans Ter331] Length = 421 Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/421 (81%), Positives = 374/421 (88%) Query: 3 LLHQIIDRRLAGKNKSIANRERFLRRFRSDIRRSVTEAVRDRSIKDIESSKSITIPRKDI 62 +LHQIIDRRL+GKNKSIANRERFLRRFR+ I RSVTEAVRDR IK+IE++KSI+IPRK I Sbjct: 1 MLHQIIDRRLSGKNKSIANRERFLRRFRAAIHRSVTEAVRDRGIKEIENAKSISIPRKGI 60 Query: 63 SEPAFHHGRGGKREIVHPGNQDYLQGDRIPRRSGGSGDGGSTASNEGESQDEFTFELSRE 122 SEP F HG GGKRE+VHPGNQDYLQGDRI R GG G GGS+AS++GE +DEF F+LSRE Sbjct: 61 SEPIFGHGPGGKREMVHPGNQDYLQGDRIARPDGGQGGGGSSASDQGEGEDEFVFQLSRE 120 Query: 123 EFMQYFFEDLELPRLIQTNLMSIPNWKNMRAGYSVDGSPANIDIVRSLRSSLGRRIALGG 182 EFMQYFFEDLELPRLI+TNL+++P+WKNMRAGYS DGSP NIDIVRSLRSSLGRRIALG Sbjct: 121 EFMQYFFEDLELPRLIKTNLLAVPSWKNMRAGYSTDGSPNNIDIVRSLRSSLGRRIALGS 180 Query: 183 PLVAKLRELEEQLCALQNDPGDRRSEILLLEEEIHHLKGRIWRIPFIDPFDLRYVNRVRQ 242 PLV +LRELE + L+ DP DRR EI LE++IHHLKGRIWRIPFIDPFDLRYVNRV+ Sbjct: 181 PLVVRLRELELLMETLKADPQDRREEIKRLEDDIHHLKGRIWRIPFIDPFDLRYVNRVKV 240 Query: 243 PQPSSRAVMFCVMDVSGSMDEQRKDLSKRFFILLYLFLMRNYEHIEVVFIRHHTRADEVD 302 PQPSSRAVMFCVMDVSGSMDEQRKDLSKRFFILLYLFL RNYEHIEVVFIRHHTRADEVD Sbjct: 241 PQPSSRAVMFCVMDVSGSMDEQRKDLSKRFFILLYLFLTRNYEHIEVVFIRHHTRADEVD 300 Query: 303 EETFFHSQESGGTVVSSALELMQDIIRTRYPSNEWNIYGAQASDGDNWNDDSPKCRSILE 362 EETFFHSQESGGTVVSSALELM+ II RYP +WNIYGAQASDGDNWNDDSPKCR +LE Sbjct: 301 EETFFHSQESGGTVVSSALELMKQIIDERYPPGDWNIYGAQASDGDNWNDDSPKCRQLLE 360 Query: 363 EAILPMCRYFAYIQVAEPEQNLWTEYTQLLHEHPHFAMKKVQSSSEIYPVFRELFEKQVH 422 ILP RYFAYIQV EQNLWTEY Q+ +P FAMKKVQ++SEIYPVFRELFEKQVH Sbjct: 361 LEILPRSRYFAYIQVTVEEQNLWTEYQQIAAVNPQFAMKKVQAASEIYPVFRELFEKQVH 420 Query: 423 A 423 + Sbjct: 421 S 421 >ref|YP_368991.1| hypothetical protein Bcep18194_A4752 [Burkholderia sp. 383] gb|ABB08347.1| protein of unknown function DUF444 [Burkholderia sp. 383] Length = 422 Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust. Identities = 324/419 (77%), Positives = 374/419 (89%) Query: 3 LLHQIIDRRLAGKNKSIANRERFLRRFRSDIRRSVTEAVRDRSIKDIESSKSITIPRKDI 62 +LHQIIDRRLAGKNKSIANRERFLRR ++ IRR+V++AVRDRSIKDI+S++SITIPRKDI Sbjct: 1 MLHQIIDRRLAGKNKSIANRERFLRRVKNYIRRAVSDAVRDRSIKDIQSTQSITIPRKDI 60 Query: 63 SEPAFHHGRGGKREIVHPGNQDYLQGDRIPRRSGGSGDGGSTASNEGESQDEFTFELSRE 122 +EP F HG GG+RE VHPGN+DY++GD+IPR GGSG GGS ASNEGE QD+F FELSR+ Sbjct: 61 AEPNFRHGPGGRREYVHPGNEDYVRGDKIPRPQGGSGGGGSQASNEGEGQDDFVFELSRD 120 Query: 123 EFMQYFFEDLELPRLIQTNLMSIPNWKNMRAGYSVDGSPANIDIVRSLRSSLGRRIALGG 182 EFMQYFF+DLELPRL++T+L+++P+WKN+RAG+S +G+P NID+VRSLRS+LGRRIALG Sbjct: 121 EFMQYFFDDLELPRLVKTHLLTVPSWKNVRAGWSAEGTPNNIDVVRSLRSALGRRIALGS 180 Query: 183 PLVAKLRELEEQLCALQNDPGDRRSEILLLEEEIHHLKGRIWRIPFIDPFDLRYVNRVRQ 242 PLV +LRELE QL A+++DP DRR+EI +LE EIHHLKGRIWRIPFIDPFDLRY+NRV+Q Sbjct: 181 PLVNELRELEAQLEAMKSDPEDRRAEIAVLEAEIHHLKGRIWRIPFIDPFDLRYINRVKQ 240 Query: 243 PQPSSRAVMFCVMDVSGSMDEQRKDLSKRFFILLYLFLMRNYEHIEVVFIRHHTRADEVD 302 PQPSS+AVMFC+MDVSGSMDEQRKDLSKRFFILLYLFL RNYE IEVVFIRHHTRA+EVD Sbjct: 241 PQPSSQAVMFCLMDVSGSMDEQRKDLSKRFFILLYLFLKRNYERIEVVFIRHHTRAEEVD 300 Query: 303 EETFFHSQESGGTVVSSALELMQDIIRTRYPSNEWNIYGAQASDGDNWNDDSPKCRSILE 362 E+TFFHS ESGGTVVSSALELM+ ++ RY EWNIYGAQASDGDNW DDSPKCR ILE Sbjct: 301 EDTFFHSTESGGTVVSSALELMRKVMNERYSPTEWNIYGAQASDGDNWTDDSPKCRKILE 360 Query: 363 EAILPMCRYFAYIQVAEPEQNLWTEYTQLLHEHPHFAMKKVQSSSEIYPVFRELFEKQV 421 E IL RYFAYIQVA EQNLW EY QL PH AMKKV+S+++IYPVFRELFEKQV Sbjct: 361 EDILTKTRYFAYIQVAPEEQNLWLEYAQLALSQPHLAMKKVESAADIYPVFRELFEKQV 419 >ref|YP_001119407.1| hypothetical protein Bcep1808_1565 [Burkholderia vietnamiensis G4] gb|ABO54572.1| protein of unknown function DUF444 [Burkholderia vietnamiensis G4] Length = 422 Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust. Identities = 324/419 (77%), Positives = 373/419 (89%) Query: 3 LLHQIIDRRLAGKNKSIANRERFLRRFRSDIRRSVTEAVRDRSIKDIESSKSITIPRKDI 62 +LHQIIDRRLAGKNKSIANRERFLRR ++ IRR+V++AVRDRSIKDI+S++SITIPRKDI Sbjct: 1 MLHQIIDRRLAGKNKSIANRERFLRRVKNYIRRAVSDAVRDRSIKDIQSTQSITIPRKDI 60 Query: 63 SEPAFHHGRGGKREIVHPGNQDYLQGDRIPRRSGGSGDGGSTASNEGESQDEFTFELSRE 122 +EP F HG GG+RE VHPGN+DY++GD+IPR GGSG GGS ASN+GE QD+F FELSR+ Sbjct: 61 AEPTFRHGPGGRREYVHPGNEDYVRGDKIPRPQGGSGGGGSQASNDGEGQDDFVFELSRD 120 Query: 123 EFMQYFFEDLELPRLIQTNLMSIPNWKNMRAGYSVDGSPANIDIVRSLRSSLGRRIALGG 182 EFMQYFF+DLELPRL++T+L+++P+WKN+RAG++ +G+P NID+VRSLRS+LGRRIALG Sbjct: 121 EFMQYFFDDLELPRLVKTHLLTVPSWKNVRAGWAAEGTPNNIDVVRSLRSALGRRIALGS 180 Query: 183 PLVAKLRELEEQLCALQNDPGDRRSEILLLEEEIHHLKGRIWRIPFIDPFDLRYVNRVRQ 242 PLV +LRELE QL AL+NDP DRR+EI LE EIHHLKGRIWRIPFIDPFDLRYVNRV+Q Sbjct: 181 PLVNELRELEAQLEALKNDPEDRRAEIATLEAEIHHLKGRIWRIPFIDPFDLRYVNRVKQ 240 Query: 243 PQPSSRAVMFCVMDVSGSMDEQRKDLSKRFFILLYLFLMRNYEHIEVVFIRHHTRADEVD 302 PQPSS+AVMFC+MDVSGSMDEQRKDL+KRFFILLYLFL RNYE IEVVFIRHHTRA+EVD Sbjct: 241 PQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYERIEVVFIRHHTRAEEVD 300 Query: 303 EETFFHSQESGGTVVSSALELMQDIIRTRYPSNEWNIYGAQASDGDNWNDDSPKCRSILE 362 E+TFFHS ESGGTVVSSALELM+ ++ RY EWNIYGAQASDGDNW DDSPKCR ILE Sbjct: 301 EDTFFHSTESGGTVVSSALELMRKVMDERYSPTEWNIYGAQASDGDNWTDDSPKCRKILE 360 Query: 363 EAILPMCRYFAYIQVAEPEQNLWTEYTQLLHEHPHFAMKKVQSSSEIYPVFRELFEKQV 421 E IL RYFAYIQVA EQNLW EY QL PH AMKKV+S+++IYPVFRELFEKQV Sbjct: 361 EDILTKTRYFAYIQVAPEEQNLWLEYAQLALSQPHLAMKKVESAADIYPVFRELFEKQV 419 >ref|YP_002230792.1| hypothetical protein BCAL1664 [Burkholderia cenocepacia J2315] emb|CAR51963.1| conserved hypothetical protein [Burkholderia cenocepacia J2315] Length = 422 Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust. Identities = 324/419 (77%), Positives = 372/419 (88%) Query: 3 LLHQIIDRRLAGKNKSIANRERFLRRFRSDIRRSVTEAVRDRSIKDIESSKSITIPRKDI 62 +LHQIIDRRLAGKNKSIANRERFLRR ++ IRR+V++AVRDRSIKDI+S++SITIPRKDI Sbjct: 1 MLHQIIDRRLAGKNKSIANRERFLRRVKNYIRRAVSDAVRDRSIKDIQSTQSITIPRKDI 60 Query: 63 SEPAFHHGRGGKREIVHPGNQDYLQGDRIPRRSGGSGDGGSTASNEGESQDEFTFELSRE 122 +EP F H GG+RE VHPGN+DY++GD+IPR GGSG GGS ASNEGE QD+F FELSR+ Sbjct: 61 AEPNFRHAPGGRREYVHPGNEDYVRGDKIPRPQGGSGGGGSQASNEGEGQDDFVFELSRD 120 Query: 123 EFMQYFFEDLELPRLIQTNLMSIPNWKNMRAGYSVDGSPANIDIVRSLRSSLGRRIALGG 182 EFMQYFF+DLELPRL++T+L+++P+WKN+RAG+S +G+P NID+VRSLRS+LGRRIALG Sbjct: 121 EFMQYFFDDLELPRLVKTHLLTVPSWKNVRAGWSAEGTPNNIDVVRSLRSALGRRIALGS 180 Query: 183 PLVAKLRELEEQLCALQNDPGDRRSEILLLEEEIHHLKGRIWRIPFIDPFDLRYVNRVRQ 242 PLV +LRELE QL AL+NDP DRR+EI LE EIHHLKGRIWRIPFIDPFDLRY+NRV+Q Sbjct: 181 PLVNELRELEAQLEALKNDPEDRRAEIATLEAEIHHLKGRIWRIPFIDPFDLRYINRVKQ 240 Query: 243 PQPSSRAVMFCVMDVSGSMDEQRKDLSKRFFILLYLFLMRNYEHIEVVFIRHHTRADEVD 302 PQPSS+AVMFC+MDVSGSMDEQRKDL+KRFFILLYLFL RNYE IEVVFIRHHTRA+EVD Sbjct: 241 PQPSSQAVMFCLMDVSGSMDEQRKDLAKRFFILLYLFLKRNYERIEVVFIRHHTRAEEVD 300 Query: 303 EETFFHSQESGGTVVSSALELMQDIIRTRYPSNEWNIYGAQASDGDNWNDDSPKCRSILE 362 E+TFFHS ESGGTVVSSALELM+ ++ RY EWNIYGAQASDGDNW DDSPKCR ILE Sbjct: 301 EDTFFHSTESGGTVVSSALELMRKVMSERYSPTEWNIYGAQASDGDNWTDDSPKCRKILE 360 Query: 363 EAILPMCRYFAYIQVAEPEQNLWTEYTQLLHEHPHFAMKKVQSSSEIYPVFRELFEKQV 421 E IL RYFAYIQVA EQNLW EY QL PH AMKKV+S+++IYPVFRELFEKQV Sbjct: 361 EDILTQTRYFAYIQVAPEEQNLWLEYAQLALSQPHLAMKKVESAADIYPVFRELFEKQV 419