BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0731.p (210 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777708.1| TetR family transcription regulator protein ... 258 3e-67 ref|ZP_06583779.1| transcriptional regulator [Streptomyces roseo... 178 5e-43 ref|ZP_08238799.1| regulatory protein TetR [Streptomyces cf. gri... 178 6e-43 ref|YP_001826596.1| TetR family transcriptional regulator [Strep... 177 9e-43 ref|YP_003395103.1| TetR family transcriptional regulator [Conex... 174 1e-41 >ref|YP_003777708.1| TetR family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ65800.1| TetR family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 210 Score = 258 bits (660), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 123/210 (58%), Positives = 160/210 (76%), Gaps = 6/210 (2%) Query: 1 MQQTRGRPRSFDRDEALRLAMQVFWNKGYEGTTMADLTAAIGVKAPSLYAAFGDKNALFR 60 M +TRGRPRSFDRD+AL+ AMQVFW+KGYEGTTMADLT AIGVKAPSLYAAFGDK+ALFR Sbjct: 1 MIRTRGRPRSFDRDQALQQAMQVFWSKGYEGTTMADLTEAIGVKAPSLYAAFGDKDALFR 60 Query: 61 EAIDFYSATTAIGPINALKEGKGMREDLHNMLQASVALYADPAN------GKGCMVVVSA 114 E ++ Y+ T + P+ L+ GKG+REDL ML+ASV +Y+ + GKGCMVV+SA Sbjct: 61 EVVEVYARTVSAEPLRLLQAGKGIREDLQAMLRASVRMYSGKSTVPGLPAGKGCMVVISA 120 Query: 115 INCAPENAAHAEEMTVRRQKKRQELAKRFRKAQEQNELSADADIDGLADFYTAVLHGLSL 174 INCAPEN+ H++ ++ RR K+R E+ R +AQ + E+ ADAD+ L DFYT+ L+GL+L Sbjct: 121 INCAPENSEHSDALSQRRHKRRNEIRARLLQAQREGEIRADADVTALGDFYTSFLNGLAL 180 Query: 175 SARDGVSCERLANTICHAMKALDAVLIAPK 204 A+DGVS RLA T+ AM L++VL+ + Sbjct: 181 GAKDGVSSARLAATLGPAMLPLESVLLGAR 210 >ref|ZP_06583779.1| transcriptional regulator [Streptomyces roseosporus NRRL 15998] gb|EFE74240.1| transcriptional regulator [Streptomyces roseosporus NRRL 15998] Length = 207 Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 87/199 (43%), Positives = 124/199 (62%), Gaps = 1/199 (0%) Query: 5 RGRPRSFDRDEALRLAMQVFWNKGYEGTTMADLTAAIGVKAPSLYAAFGDKNALFREAID 64 RGRPR+FDR ALR AM+VFW GYEGT + DLT A+ + + SLY FG K LFREA++ Sbjct: 4 RGRPRAFDRTVALRGAMEVFWELGYEGTKLTDLTGAMNINSASLYNTFGSKEQLFREAVE 63 Query: 65 FYSATTAIGPINALKEGKGMREDLHNMLQASVALYADPANGKGCMVVVSAINCAPENAAH 124 Y TT AL+E R + ML+ ++ ++AD GCM+V++A NCA +N + Sbjct: 64 LYGGTTGSATARALREEPTARAAVEAMLRGNIDIFADTGTPSGCMIVLAAANCAHQNRSV 123 Query: 125 AEEMTVRRQKKRQELAKRFRKAQEQNELSADADIDGLADFYTAVLHGLSLSARDGVSCER 184 AE + R++ EL R +A + EL+ ++D+ +ADFY +L+GLS+ ARDGV ER Sbjct: 124 AEYLAGHRRRTVAELESRLERAISEGELAPESDVRSVADFYATILYGLSIEARDGVPVER 183 Query: 185 LANTICHAMKALDAVLIAP 203 L +T+ A+ D L+ P Sbjct: 184 LRSTVDRAVGLWD-TLVRP 201 >ref|ZP_08238799.1| regulatory protein TetR [Streptomyces cf. griseus XylebKG-1] gb|EGE44713.1| regulatory protein TetR [Streptomyces griseus XylebKG-1] Length = 206 Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 88/199 (44%), Positives = 119/199 (59%) Query: 5 RGRPRSFDRDEALRLAMQVFWNKGYEGTTMADLTAAIGVKAPSLYAAFGDKNALFREAID 64 +GRPR+FDR ALR AM FW GYEGT + DLTAA+G+ + SLY FG K L+REA+ Sbjct: 4 KGRPRAFDRAAALRRAMMTFWELGYEGTKLTDLTAAMGINSASLYNTFGSKERLYREAVA 63 Query: 65 FYSATTAIGPINALKEGKGMREDLHNMLQASVALYADPANGKGCMVVVSAINCAPENAAH 124 Y T AL+ R + ML+ +V +ADP GCM+V+SA NC+ +N Sbjct: 64 LYDRTAGSATNRALRGAPTARAAVEAMLRGNVDTFADPETPSGCMIVLSATNCSHQNRKV 123 Query: 125 AEEMTVRRQKKRQELAKRFRKAQEQNELSADADIDGLADFYTAVLHGLSLSARDGVSCER 184 AE + R+ EL KR +A E+ EL D+ +A FY +LHGLS+ ARDGV ER Sbjct: 124 AEHLAEWRRTSVAELEKRLERAVEEGELEPGTDVAAIAAFYATILHGLSIEARDGVPLER 183 Query: 185 LANTICHAMKALDAVLIAP 203 L +T+ HA+ D+++ P Sbjct: 184 LRSTVDHAVALWDSLVRQP 202 >ref|YP_001826596.1| TetR family transcriptional regulator [Streptomyces griseus subsp. griseus NBRC 13350] dbj|BAG21913.1| putative TetR-family transcriptional regulator [Streptomyces griseus subsp. griseus NBRC 13350] Length = 206 Score = 177 bits (449), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 88/199 (44%), Positives = 119/199 (59%) Query: 5 RGRPRSFDRDEALRLAMQVFWNKGYEGTTMADLTAAIGVKAPSLYAAFGDKNALFREAID 64 +GRPR+FDR ALR AM FW GYEGT + DLTAA+G+ + SLY FG K L+REA+ Sbjct: 4 KGRPRAFDRAAALRRAMVTFWELGYEGTKLTDLTAAMGINSASLYNTFGSKERLYREAVA 63 Query: 65 FYSATTAIGPINALKEGKGMREDLHNMLQASVALYADPANGKGCMVVVSAINCAPENAAH 124 Y T AL+ R + ML+ +V +ADP GCM+V+SA NC+ +N Sbjct: 64 LYDRTAGSATNRALRGAPTARAAVEAMLRGNVDTFADPETPSGCMIVLSATNCSHQNRKV 123 Query: 125 AEEMTVRRQKKRQELAKRFRKAQEQNELSADADIDGLADFYTAVLHGLSLSARDGVSCER 184 AE + R+ EL KR +A E+ EL D+ +A FY +LHGLS+ ARDGV ER Sbjct: 124 AEHLAEWRRTSVAELEKRLERAVEEGELEPGTDVAAIAAFYATILHGLSIEARDGVPLER 183 Query: 185 LANTICHAMKALDAVLIAP 203 L +T+ HA+ D+++ P Sbjct: 184 LRSTVDHAVALWDSLVRQP 202 >ref|YP_003395103.1| TetR family transcriptional regulator [Conexibacter woesei DSM 14684] gb|ADB51728.1| transcriptional regulator, TetR family [Conexibacter woesei DSM 14684] Length = 205 Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 85/200 (42%), Positives = 116/200 (58%) Query: 5 RGRPRSFDRDEALRLAMQVFWNKGYEGTTMADLTAAIGVKAPSLYAAFGDKNALFREAID 64 RGRPR+FDRD ALR AM+VFW +GYEG ++ADLT +G+ +PSLYAAFG K LFREA+ Sbjct: 4 RGRPRTFDRDAALRRAMEVFWERGYEGVSLADLTTEMGIASPSLYAAFGSKEGLFREAVA 63 Query: 65 FYSATTAIGPINALKEGKGMREDLHNMLQASVALYADPANGKGCMVVVSAINCAPENAAH 124 Y AL R + ML+ + A Y P GCMVV++A N +P N Sbjct: 64 LYGTLEGGATARALAVQSTARAAIEAMLRDNAAGYTTPGRPTGCMVVLAATNVSPANQGI 123 Query: 125 AEEMTVRRQKKRQELAKRFRKAQEQNELSADADIDGLADFYTAVLHGLSLSARDGVSCER 184 + M +R+ R+++ R + ++ + D+D LA + VLHGLS ARDGVSC+ Sbjct: 124 GDFMAEQRRTAREDVRARIARGVADGDVGPETDVDALAAYVATVLHGLSFEARDGVSCDT 183 Query: 185 LANTICHAMKALDAVLIAPK 204 L + AM DA++ P Sbjct: 184 LNAIVDRAMVTWDALVAPPS 203