BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0669.p (287 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777654.1| polypeptide chain release factors methylase ... 369 e-100 ref|YP_001351901.1| methylase of polypeptide chain release facto... 362 3e-98 ref|YP_001098546.1| protein methyltransferase HemK [Herminiimona... 347 1e-93 ref|YP_004754562.1| hypothetical protein CFU_3916 [Collimonas fu... 344 1e-92 ref|ZP_04579052.1| methyltransferase HemK MTase hemK [Oxalobacte... 334 1e-89 >ref|YP_003777654.1| polypeptide chain release factors methylase [Herbaspirillum seropedicae SmR1] gb|ADJ65746.1| polypeptide chain release factors methylase protein [Herbaspirillum seropedicae SmR1] Length = 277 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 198/273 (72%), Positives = 226/273 (82%), Gaps = 5/273 (1%) Query: 10 GISLAEALRSAPLDPLENRILIGHALQLTRIQLITQSERQLTADEAAQLSALFRRRLQGE 69 G +LA L++APLDPLENRIL+ HAL+LTR+QLITQSERQL+A EA L+AL RRL+GE Sbjct: 9 GCTLATVLKTAPLDPLENRILLCHALRLTRVQLITQSERQLSAAEAETLAALLARRLRGE 68 Query: 70 PIAYIVGEREFFGLAMQVTPDVLIPRPDTELLVELALERLPQHGKALDMGTGSGAIAVAI 129 PIAYIVG+REF+GL ++V+PDVLIPRPDTELLVELALERLPQ G ALDMGTGSGAIAVAI Sbjct: 69 PIAYIVGQREFYGLDLRVSPDVLIPRPDTELLVELALERLPQGGSALDMGTGSGAIAVAI 128 Query: 130 AHTRPDVAMTALDVSEGALKVAAGNAQRHGAKVEFLRSDWYAALNDMGNANQPYLDLIVS 189 AHTRPD +TALD S AL +A NA H +V L SDWY AL +A+Q + DLIVS Sbjct: 129 AHTRPDAQVTALDASPAALAIARENASTHQVRVRLLESDWYGAL----DADQAF-DLIVS 183 Query: 190 NPPYIVAGDMHLSQGDLRFEPIGALTDHADGLSALRIIVDGAATYLKPGGWLLMEHGYDQ 249 NPPYIVAGD+HLSQGDLRFEP+ ALTDHADGLS LR I++GA +LK GGWLLMEHGYDQ Sbjct: 184 NPPYIVAGDIHLSQGDLRFEPVDALTDHADGLSDLRTIIEGAPAHLKAGGWLLMEHGYDQ 243 Query: 250 SGAVRKLLEQRGFAEVQSWRDLAGIERVSGGKL 282 + AVR LL G+ EVQSWRDLAGIERVSG +L Sbjct: 244 AAAVRALLTGGGWREVQSWRDLAGIERVSGARL 276 >ref|YP_001351901.1| methylase of polypeptide chain release factors [Janthinobacterium sp. Marseille] gb|ABR88634.1| methylase of polypeptide chain release factors [Janthinobacterium sp. Marseille] Length = 280 Score = 362 bits (930), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 182/278 (65%), Positives = 214/278 (76%), Gaps = 6/278 (2%) Query: 7 IRPGISLAEALRSAPLDPLENRILIGHALQLTRIQLITQSERQLTADEAAQLSALFRRRL 66 I G ++A ++ AP+ LE RIL+G+ +L+R+QLITQ+ER LTA+EA QLS LF RRL Sbjct: 8 IPAGTTVAAVMQRAPVAQLEARILLGYVTRLSRVQLITQAERALTAEEAQQLSQLFARRL 67 Query: 67 QGEPIAYIVGEREFFGLAMQVTPDVLIPRPDTELLVELALERLPQHGKALDMGTGSGAIA 126 GEPIAY+ GEREFFGL+ V+P VLIPRPDTELLVELAL LP G+ LDMGTGSGAIA Sbjct: 68 AGEPIAYLTGEREFFGLSFDVSPAVLIPRPDTELLVELALHYLPPQGRVLDMGTGSGAIA 127 Query: 127 VAIAHTRPDVAMTALDVSEGALKVAAGNAQRHGAKVEFLRSDWYAALNDMGNANQPYLDL 186 VAIAH RPD +TALDVS AL +A GNA+++ +V FLRSDW++A+ + DL Sbjct: 128 VAIAHARPDAFVTALDVSAEALAIAEGNARKNQVQVNFLRSDWFSAVKEQ------RFDL 181 Query: 187 IVSNPPYIVAGDMHLSQGDLRFEPIGALTDHADGLSALRIIVDGAATYLKPGGWLLMEHG 246 IVSNPPYIVAGD HLS+GDLRFEP+ ALTDHA+GLS L+ I AA YL P WLLMEHG Sbjct: 182 IVSNPPYIVAGDPHLSEGDLRFEPVDALTDHANGLSDLQTITRDAARYLAPAAWLLMEHG 241 Query: 247 YDQSGAVRKLLEQRGFAEVQSWRDLAGIERVSGGKLAA 284 YDQ+ AVR +L GF EVQSWRDLAGIERVSGGK A Sbjct: 242 YDQAAAVRDVLATHGFTEVQSWRDLAGIERVSGGKYTA 279 >ref|YP_001098546.1| protein methyltransferase HemK [Herminiimonas arsenicoxydans] emb|CAL60417.1| Protein methyltransferase HemK (Protein-glutamine N-methyltransferase hemK) (Protein-(glutamine-N5) MTase hemK) [Herminiimonas arsenicoxydans] Length = 276 Score = 347 bits (890), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 191/279 (68%), Positives = 222/279 (79%), Gaps = 6/279 (2%) Query: 7 IRPGISLAEALRSAPLDPLENRILIGHALQLTRIQLITQSERQLTADEAAQLSALFRRRL 66 I G ++A LR AP++ LE R+LIGH QL+R+QLIT +ER L A EA QL+ LF RR+ Sbjct: 4 ILAGDTIAAILRRAPVEQLEARMLIGHVTQLSRVQLITNAERVLNAAEAQQLATLFARRM 63 Query: 67 QGEPIAYIVGEREFFGLAMQVTPDVLIPRPDTELLVELALERLPQHGKALDMGTGSGAIA 126 GEP+AY++GEREF+GL+ QV+P VLIPRPDTELLVELAL+RLPQ G+ LDMGTGSGAIA Sbjct: 64 AGEPMAYLLGEREFYGLSFQVSPAVLIPRPDTELLVELALQRLPQQGRVLDMGTGSGAIA 123 Query: 127 VAIAHTRPDVAMTALDVSEGALKVAAGNAQRHGAKVEFLRSDWYAALNDMGNANQPYLDL 186 +AIAH RPD +TALDVSE AL VA+ NA RH A+VE LRSDW+AAL+ DL Sbjct: 124 IAIAHARPDAVVTALDVSEAALAVASANAHRHKARVECLRSDWFAALDGR------QFDL 177 Query: 187 IVSNPPYIVAGDMHLSQGDLRFEPIGALTDHADGLSALRIIVDGAATYLKPGGWLLMEHG 246 IVSNPPYIVAGD HLS+GDLRFEPI AL+DHADGLSALRII + AA +L GWLLMEHG Sbjct: 178 IVSNPPYIVAGDRHLSEGDLRFEPIDALSDHADGLSALRIISEHAADHLSDDGWLLMEHG 237 Query: 247 YDQSGAVRKLLEQRGFAEVQSWRDLAGIERVSGGKLAAA 285 YDQ+ AVR LL + GF EVQSWRDLA IERVSGGK + A Sbjct: 238 YDQAAAVRGLLAENGFGEVQSWRDLAQIERVSGGKKSRA 276 >ref|YP_004754562.1| hypothetical protein CFU_3916 [Collimonas fungivorans Ter331] gb|AEK63739.1| hypothetical protein CFU_3916 [Collimonas fungivorans Ter331] Length = 290 Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 187/293 (63%), Positives = 226/293 (77%), Gaps = 13/293 (4%) Query: 1 VSDFSDIRPGISLAEALRSAPLDPLENRILIGHALQLTRIQLITQSERQLTADEAAQLSA 60 + D I G S+A L+ APL+PLENRIL+ HALQLTRIQLITQ ER + +A +LS Sbjct: 4 IPDTFAIEAGASIAAILKQAPLNPLENRILLMHALQLTRIQLITQDERTIDTGQARRLST 63 Query: 61 LFRRRLQGEPIAYIVGEREFFGLAMQVTPDVLIPRPDTELLVELALERLPQHG-----KA 115 LF+RRL GEPIAYI+G+REF+GL ++VTPDVLIPRP+TELLV+LAL+ LP Sbjct: 64 LFQRRLLGEPIAYIIGQREFYGLQLEVTPDVLIPRPETELLVDLALQHLPAAAGPETLSV 123 Query: 116 LDMGTGSGAIAVAIAHTRPDVAMTALDVSEGALKVAAGNAQRHGA--KVEFLRSDWYAAL 173 LD+GTGSGAIAVAIAH+RPD+ +TALDVS AL VA+ NA R+ A +++ L S WY AL Sbjct: 124 LDLGTGSGAIAVAIAHSRPDLQLTALDVSAAALAVASRNAARYLAPGQLQLLLSSWYGAL 183 Query: 174 NDMGNANQPYLDLIVSNPPYIVAGDMHLSQGDLRFEPIGALTDHADGLSALRIIVDGAAT 233 +D +LIV+NPPYIVAGD HL+QGDLRFEP ALTDHADGLSALRII+DGAA Sbjct: 184 DDR------QFNLIVANPPYIVAGDSHLAQGDLRFEPQDALTDHADGLSALRIIIDGAAR 237 Query: 234 YLKPGGWLLMEHGYDQSGAVRKLLEQRGFAEVQSWRDLAGIERVSGGKLAAAS 286 +LK GGWLLMEHGYDQ+ AVR+LL+ + F VQSW D+AGIERVSGG+ + S Sbjct: 238 HLKDGGWLLMEHGYDQAPAVRELLQAQQFDAVQSWEDIAGIERVSGGRRKSPS 290 >ref|ZP_04579052.1| methyltransferase HemK MTase hemK [Oxalobacter formigenes OXCC13] gb|EEO30025.1| methyltransferase HemK MTase hemK [Oxalobacter formigenes OXCC13] Length = 279 Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 171/281 (60%), Positives = 207/281 (73%), Gaps = 7/281 (2%) Query: 4 FSDIRPGISLAEALRSAPLDPLENRILIGHALQLTRIQLITQSERQLTADEAAQLSALFR 63 SDI G+++ + PLDPLE RIL+ +A+ +R++LIT S+ LT ++A LS + Sbjct: 1 MSDIEAGMTIRSLFSTVPLDPLELRILLEYAIGFSRVKLITHSDHPLTTEQAKALSDVVS 60 Query: 64 RRLQGEPIAYIVGEREFFGLAMQVTPDVLIPRPDTELLVELALERLPQHGKALDMGTGSG 123 RR+ GEP+AYI G+REFFGL+ V PDVLIPRP+TELLVELALERLP GK +DMGTGSG Sbjct: 61 RRVCGEPVAYITGKREFFGLSFAVCPDVLIPRPETELLVELALERLPHGGKIVDMGTGSG 120 Query: 124 AIAVAIAHTRPDVAMTALDVSEGALKVAAGNA---QRHGAKVEFLRSDWYAALNDMGNAN 180 AIA+AIA RPD + A DVSE AL +A NA + V F +W+ AL N N Sbjct: 121 AIAIAIASERPDAHVFATDVSEKALNMATHNALALLKGKQTVHFSAGNWFYALK---NVN 177 Query: 181 QPYLDLIVSNPPYIVAGDMHLSQGDLRFEPIGALTDHADGLSALRIIVDGAATYLKPGGW 240 + + DLIVSNPPYI + D HL +GDLRFEP+GALTDHADGLSAL+I+V GA YLK GGW Sbjct: 178 ETF-DLIVSNPPYIDSKDDHLQKGDLRFEPVGALTDHADGLSALKILVSGAQAYLKRGGW 236 Query: 241 LLMEHGYDQSGAVRKLLEQRGFAEVQSWRDLAGIERVSGGK 281 LLMEHGYDQ+ AVR LL + GF EVQSW+DLAGI RVSGGK Sbjct: 237 LLMEHGYDQAVAVRALLARAGFEEVQSWKDLAGIGRVSGGK 277