BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0643.p (521 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004750882.1| putative ABC transporter [Collimonas fungivo... 917 0.0 ref|YP_003777641.1| ABC transporter ATPase [Herbaspirillum serop... 916 0.0 ref|YP_725452.1| ABC transporter ATPase [Ralstonia eutropha H16]... 724 0.0 ref|YP_004684731.1| CUT2 family ABC transporter ATP-binding prot... 724 0.0 ref|YP_002981928.1| ABC transporter-like protein [Ralstonia pick... 721 0.0 >ref|YP_004750882.1| putative ABC transporter [Collimonas fungivorans Ter331] gb|AEK60059.1| putative ABC transporter [Collimonas fungivorans Ter331] Length = 558 Score = 917 bits (2370), Expect = 0.0, Method: Compositional matrix adjust. Identities = 453/521 (86%), Positives = 476/521 (91%), Gaps = 9/521 (1%) Query: 1 VTATSPARLQIAHIRKTYPGVLANDDINLSVAPGEIHAVLGENGAGKSTLMKIIFGTVKP 60 VT+T P RL+IAHIRK YPGVLANDDINL VAPGEIHAVLGENGAGKSTLMKIIFGTVKP Sbjct: 47 VTSTIP-RLEIAHIRKAYPGVLANDDINLRVAPGEIHAVLGENGAGKSTLMKIIFGTVKP 105 Query: 61 DAGEIYWNGALAHIANPQIARKLGIAMVFQHFSLFDTLTVAENIALGLDADTDMQDLVAR 120 DAGEI+WNG HIANP IARKLGIAMVFQHFSLFDTLTVAENIALGL +D M LV + Sbjct: 106 DAGEIFWNGEQVHIANPHIARKLGIAMVFQHFSLFDTLTVAENIALGLASDISMPQLVTQ 165 Query: 121 IRQTGEKYGLELEPNRHVHTLSVGERQRVEIVRALLTNPQLLILDEPTSVLTPQAVEKLF 180 IRQTGEKYGLELEP+RHVHTLSVGERQRVEIVRALLTNPQLLILDEPTSVLTPQAV+KLF Sbjct: 166 IRQTGEKYGLELEPHRHVHTLSVGERQRVEIVRALLTNPQLLILDEPTSVLTPQAVDKLF 225 Query: 181 VTLRLLADEGCSILYISHKLDEIRALCHSATVMRGGRVTGTCDPRNETSAGLSRMMIGEE 240 VTLR LA EGCSILYISHKLDEIRALCHSATVMR GRVTG CDPRNETSAGLSR+MIG+E Sbjct: 226 VTLRKLAAEGCSILYISHKLDEIRALCHSATVMRNGRVTGNCDPRNETSAGLSRLMIGDE 285 Query: 241 LVRLRRERNPESQRNERKLHVNRLCLPKAHLFATELKDIECEVRAGEIVGIAGVSGNGQQ 300 LVRL+RERNP+SQR+ERKLH+NRL LPKAHLFATEL DIECEVRAGEIVGIAGVSGNGQQ Sbjct: 286 LVRLQRERNPDSQRSERKLHLNRLSLPKAHLFATELHDIECEVRAGEIVGIAGVSGNGQQ 345 Query: 301 ELLAALSGEDQRAAPNMIMLGGSAVGHLAPNPRRAKGLGLVPEERLGRGAVPTLSLSANM 360 ELLAALSGEDQRAAPNM+ML G G LAPNPRRA GLGLVPEERLGRGAVP ++L+ANM Sbjct: 346 ELLAALSGEDQRAAPNMVMLAGRQAGQLAPNPRRALGLGLVPEERLGRGAVPGMTLAANM 405 Query: 361 LLSHQKVPYVKHGMIDFAYTRKVAAAIIERFKVKAGGPDALAKSLSGGNLQKFIVGREME 420 LLSHQK PYVK GMIDF YTRK+AA II+RFKVKA GPDALAKSLSGGNLQKFIVGRE+E Sbjct: 406 LLSHQKSPYVKRGMIDFDYTRKIAAHIIDRFKVKASGPDALAKSLSGGNLQKFIVGRELE 465 Query: 421 RKPGVFIVAQPTWGVDVGAAAQIHAEILALKQEGCAVLVISEELDELFVLCDRLHVIAKG 480 RKP VF+VAQPTWGVDVGAAAQIHAEILALK+EGCAVL+ISEELDELF LCDRLHVIAKG Sbjct: 466 RKPAVFVVAQPTWGVDVGAAAQIHAEILALKKEGCAVLIISEELDELFALCDRLHVIAKG 525 Query: 481 RLSPSIPIEQATREQVGLWMSGLWNDDAPPAPNAAAEAAHG 521 RLSPSIPIEQATREQVGLWMSGLW D A E AHG Sbjct: 526 RLSPSIPIEQATREQVGLWMSGLWQD--------APETAHG 558 >ref|YP_003777641.1| ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ65733.1| ABC-type transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 518 Score = 916 bits (2368), Expect = 0.0, Method: Compositional matrix adjust. Identities = 448/516 (86%), Positives = 472/516 (91%), Gaps = 2/516 (0%) Query: 6 PARLQIAHIRKTYPGVLANDDINLSVAPGEIHAVLGENGAGKSTLMKIIFGTVKPDAGEI 65 P RL+I+H+RK YPGVLANDD++L+VAPGEIHAVLGENGAGKSTLMKIIFG VKPDAGEI Sbjct: 5 PLRLEISHVRKAYPGVLANDDVSLAVAPGEIHAVLGENGAGKSTLMKIIFGAVKPDAGEI 64 Query: 66 YWNGALAHIANPQIARKLGIAMVFQHFSLFDTLTVAENIALGLDADTDMQDLVARIRQTG 125 WNG IANPQ+ARKLGIAMVFQHFSLFDTLTV ENIALGLDA TD+++L RI +TG Sbjct: 65 RWNGEAVQIANPQVARKLGIAMVFQHFSLFDTLTVTENIALGLDAKTDLKELAERITRTG 124 Query: 126 EKYGLELEPNRHVHTLSVGERQRVEIVRALLTNPQLLILDEPTSVLTPQAVEKLFVTLRL 185 EKYGLELEP RHVHTLSVGERQRVEIVRALLT PQLLILDEPTSVLTPQAVEKLFVTLR Sbjct: 125 EKYGLELEPQRHVHTLSVGERQRVEIVRALLTEPQLLILDEPTSVLTPQAVEKLFVTLRR 184 Query: 186 LADEGCSILYISHKLDEIRALCHSATVMRGGRVTGTCDPRNETSAGLSRMMIGEELVRLR 245 LADEGCSILYISHKLDEIRALCHSATVMRGGRVTG CDPRNE+SA LSRMMIG+ELVRL+ Sbjct: 185 LADEGCSILYISHKLDEIRALCHSATVMRGGRVTGNCDPRNESSASLSRMMIGDELVRLQ 244 Query: 246 RERNPESQRNERKLHVNRLCLPKAHLFATELKDIECEVRAGEIVGIAGVSGNGQQELLAA 305 RERNPES RNERKLHVNRL LPKAHLFATELKDIECEVRAGEIVGIAGVSGNGQQELLAA Sbjct: 245 RERNPESMRNERKLHVNRLSLPKAHLFATELKDIECEVRAGEIVGIAGVSGNGQQELLAA 304 Query: 306 LSGEDQRAAPNMIMLGGSAVGHLAPNPRRAKGLGLVPEERLGRGAVPTLSLSANMLLSHQ 365 LSGEDQRAAP+MIMLG AVG L+PNPRRA GLGLVPEERLGRGAVPTLSL+ANMLLSHQ Sbjct: 305 LSGEDQRAAPHMIMLGSKAVGDLSPNPRRAAGLGLVPEERLGRGAVPTLSLTANMLLSHQ 364 Query: 366 KVPYVKHGMIDFAYTRKVAAAIIERFKVKAGGPDALAKSLSGGNLQKFIVGREMERKPGV 425 K PYVK GMIDF +TR+ AA+IIERFKVKA GPDA AKSLSGGNLQKFIVGREMERKP V Sbjct: 365 KAPYVKRGMIDFGFTRRAAASIIERFKVKAAGPDAPAKSLSGGNLQKFIVGREMERKPAV 424 Query: 426 FIVAQPTWGVDVGAAAQIHAEILALKQEGCAVLVISEELDELFVLCDRLHVIAKGRLSPS 485 F+VAQPTWGVDVGAAAQIH EIL LKQEGCAVLVISEELDELF LCDRLHVIAKGRLSPS Sbjct: 425 FVVAQPTWGVDVGAAAQIHGEILKLKQEGCAVLVISEELDELFALCDRLHVIAKGRLSPS 484 Query: 486 IPIEQATREQVGLWMSGLWNDDAPPAPNAAAEAAHG 521 IPIEQATREQVG+WMSGLW D P A + E +G Sbjct: 485 IPIEQATREQVGVWMSGLW--DEPAALDKGTEVGNG 518 >ref|YP_725452.1| ABC transporter ATPase [Ralstonia eutropha H16] emb|CAJ92084.1| ABC-type transporter, ATPase component: CUT2 family [Ralstonia eutropha H16] Length = 520 Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust. Identities = 371/523 (70%), Positives = 412/523 (78%), Gaps = 5/523 (0%) Query: 1 VTATSPARLQIAHIRKTYPGVLANDDINLSVAPGEIHAVLGENGAGKSTLMKIIFGTVKP 60 +T+ P RL +AHI K YPGV+ANDD++LSVAPGEIHAVLGENGAGKSTLMKIIFG V+P Sbjct: 1 MTSQLPPRLALAHISKRYPGVVANDDVSLSVAPGEIHAVLGENGAGKSTLMKIIFGAVRP 60 Query: 61 DAGEIYWNGALAHIANPQIARKLGIAMVFQHFSLFDTLTVAENIALGLDA--DTDMQDLV 118 DAGE+++NGA I +P AR LGIAMVFQHFSLFDTLTV ENIALGL A +++ L Sbjct: 61 DAGEMHFNGAPVTINSPHDARNLGIAMVFQHFSLFDTLTVTENIALGLPAGQQGNIKQLA 120 Query: 119 ARIRQTGEKYGLELEPNRHVHTLSVGERQRVEIVRALLTNPQLLILDEPTSVLTPQAVEK 178 RIR T E+YGL LEPNRHVHTLSVGERQRVEIVRALL NPQLLILDEPTSVLTPQAVE Sbjct: 121 ERIRATAERYGLPLEPNRHVHTLSVGERQRVEIVRALLANPQLLILDEPTSVLTPQAVET 180 Query: 179 LFVTLRLLADEGCSILYISHKLDEIRALCHSATVMRGGRVTGTCDPRNETSAGLSRMMIG 238 LFVTLR LA EG SILYISHKLDEIRALCH ATVMR G+VTG CDPR ET+A LSR+MIG Sbjct: 181 LFVTLRQLAAEGTSILYISHKLDEIRALCHQATVMRMGKVTGVCDPRQETAASLSRLMIG 240 Query: 239 EELVRLRRERNPESQRNERKLHVNRLCLPKAHLFATELKDIECEVRAGEIVGIAGVSGNG 298 E RE ++R +L V L LP+AH FATEL I +V AGEIVGIAGVSGNG Sbjct: 241 GEP---PRETRVAAERGPVRLSVQGLSLPRAHAFATELSRISLDVHAGEIVGIAGVSGNG 297 Query: 299 QQELLAALSGEDQRAAPNMIMLGGSAVGHLAPNPRRAKGLGLVPEERLGRGAVPTLSLSA 358 QQELLAALSGED RA + LGG VG L RR GL VPEERLGRGAVP +SL+ Sbjct: 298 QQELLAALSGEDTRADNMSVQLGGKPVGRLDARQRRRAGLAFVPEERLGRGAVPGMSLAT 357 Query: 359 NMLLSHQKVPYVKHGMIDFAYTRKVAAAIIERFKVKAGGPDALAKSLSGGNLQKFIVGRE 418 N+LLSHQ PYV+ GMI +A+A+I RF+VKA GP ALA+SLSGGNLQKFIVGRE Sbjct: 358 NILLSHQTPPYVRQGMISPGAATGLASAVISRFRVKASGPHALARSLSGGNLQKFIVGRE 417 Query: 419 MERKPGVFIVAQPTWGVDVGAAAQIHAEILALKQEGCAVLVISEELDELFVLCDRLHVIA 478 +E P V IVAQPTWGVDVGAAAQIH EILALK GCA+LV+SEELDELF +CDRLHVIA Sbjct: 418 IESGPKVLIVAQPTWGVDVGAAAQIHNEILALKATGCAILVVSEELDELFAICDRLHVIA 477 Query: 479 KGRLSPSIPIEQATREQVGLWMSGLWNDDAPPAPNAAAEAAHG 521 KGRLSPS+P E ATREQ+GLWMSGLW A + A A+HG Sbjct: 478 KGRLSPSVPAETATREQIGLWMSGLWQGGPAQAQSGAEVASHG 520 >ref|YP_004684731.1| CUT2 family ABC transporter ATP-binding protein [Cupriavidus necator N-1] gb|AEI76250.1| ABC transport system ATP-binding protein CUT2 family [Cupriavidus necator N-1] Length = 520 Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/522 (71%), Positives = 411/522 (78%), Gaps = 5/522 (0%) Query: 1 VTATSPARLQIAHIRKTYPGVLANDDINLSVAPGEIHAVLGENGAGKSTLMKIIFGTVKP 60 +T+ P RL +AHI K YPGV+ANDD++LSVAPGEIHAVLGENGAGKSTLMKIIFG V+P Sbjct: 1 MTSQLPPRLALAHISKRYPGVVANDDVSLSVAPGEIHAVLGENGAGKSTLMKIIFGAVRP 60 Query: 61 DAGEIYWNGALAHIANPQIARKLGIAMVFQHFSLFDTLTVAENIALGLDA--DTDMQDLV 118 DAGE+++NGA I +P AR LGIAMVFQHFSLFDTLTV ENIALGL A +M+ L Sbjct: 61 DAGEMHFNGAQVTINSPHDARNLGIAMVFQHFSLFDTLTVTENIALGLPAGQQGNMKQLA 120 Query: 119 ARIRQTGEKYGLELEPNRHVHTLSVGERQRVEIVRALLTNPQLLILDEPTSVLTPQAVEK 178 RIR T E+YGL LEPNRHVHTLSVGERQRVEIVRALL NPQLLILDEPTSVLTPQAV+ Sbjct: 121 ERIRTTAERYGLPLEPNRHVHTLSVGERQRVEIVRALLANPQLLILDEPTSVLTPQAVDT 180 Query: 179 LFVTLRLLADEGCSILYISHKLDEIRALCHSATVMRGGRVTGTCDPRNETSAGLSRMMIG 238 LFVTLR LA EG SILYISHKLDEIRALCH ATVMR G+VTG CDPR ET+A LSR+MIG Sbjct: 181 LFVTLRQLAAEGTSILYISHKLDEIRALCHQATVMRMGKVTGVCDPRQETAASLSRLMIG 240 Query: 239 EELVRLRRERNPESQRNERKLHVNRLCLPKAHLFATELKDIECEVRAGEIVGIAGVSGNG 298 E RE + R +L V L LP+AH FATEL I +V AGEIVGIAGVSGNG Sbjct: 241 GEP---PRETRVAAFRGPVQLSVQELSLPRAHAFATELNRISLDVHAGEIVGIAGVSGNG 297 Query: 299 QQELLAALSGEDQRAAPNMIMLGGSAVGHLAPNPRRAKGLGLVPEERLGRGAVPTLSLSA 358 QQELLAALSGED RAA + LGG VG RR GL VPEERLGRGAVP +SL+ Sbjct: 298 QQELLAALSGEDTRAANVSVQLGGRLVGKRDARQRRRAGLAFVPEERLGRGAVPGMSLAT 357 Query: 359 NMLLSHQKVPYVKHGMIDFAYTRKVAAAIIERFKVKAGGPDALAKSLSGGNLQKFIVGRE 418 N+LLSHQ PYV+ GMI +AAA+I RF+VKA GP+ALA+SLSGGNLQKFIVGRE Sbjct: 358 NILLSHQTRPYVRRGMISPKAATGLAAAVISRFRVKASGPEALARSLSGGNLQKFIVGRE 417 Query: 419 MERKPGVFIVAQPTWGVDVGAAAQIHAEILALKQEGCAVLVISEELDELFVLCDRLHVIA 478 +E P V IVAQPTWGVDVGAAAQIH EILALK GCA+LV+SEELDELF +CDRLHVIA Sbjct: 418 IESGPKVLIVAQPTWGVDVGAAAQIHNEILALKATGCAILVVSEELDELFAICDRLHVIA 477 Query: 479 KGRLSPSIPIEQATREQVGLWMSGLWNDDAPPAPNAAAEAAH 520 KGRLSPS+P E ATREQVGLWMSGLW A + A A+H Sbjct: 478 KGRLSPSVPTETATREQVGLWMSGLWQGGPAQAQSGAEVASH 519 >ref|YP_002981928.1| ABC transporter-like protein [Ralstonia pickettii 12D] gb|ACS63256.1| ABC transporter related [Ralstonia pickettii 12D] Length = 516 Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/516 (71%), Positives = 415/516 (80%), Gaps = 4/516 (0%) Query: 6 PARLQIAHIRKTYPGVLANDDINLSVAPGEIHAVLGENGAGKSTLMKIIFGTVKPDAGEI 65 P RL + + K YP V+AND ++L+VAPGEIHAVLGENGAGKSTLMKIIFG V+PDAGE+ Sbjct: 5 PPRLSLTGMTKRYPSVVANDGVSLTVAPGEIHAVLGENGAGKSTLMKIIFGAVQPDAGEM 64 Query: 66 YWNGALAHIANPQIARKLGIAMVFQHFSLFDTLTVAENIALGLDADTDMQDLVARIRQTG 125 +G IANP AR LGIAMVFQHFSLFDTLTVAENI LGL A TD++D+ ++R TG Sbjct: 65 KLDGQRVEIANPHQARSLGIAMVFQHFSLFDTLTVAENILLGLPAGTDLRDVADQVRSTG 124 Query: 126 EKYGLELEPNRHVHTLSVGERQRVEIVRALLTNPQLLILDEPTSVLTPQAVEKLFVTLRL 185 E+YGL LEP+RHVHTLSVGERQRVEIVRALLT P+LLILDEPTSVLTPQAVEKLFVTLR Sbjct: 125 ERYGLPLEPHRHVHTLSVGERQRVEIVRALLTKPRLLILDEPTSVLTPQAVEKLFVTLRQ 184 Query: 186 LADEGCSILYISHKLDEIRALCHSATVMRGGRVTGTCDPRNETSAGLSRMMIGEELVRLR 245 LA EG SILYISHKLDEI+ALCH+ATVMR G+VTG CDPR ET+A LSRMMIG E Sbjct: 185 LAAEGTSILYISHKLDEIQALCHTATVMRMGKVTGVCDPRQETAASLSRMMIGGE---PP 241 Query: 246 RERNPESQRNERKLHVNRLCLPKAHLFATELKDIECEVRAGEIVGIAGVSGNGQQELLAA 305 RE P++ E ++ V L LPKAH FATEL DI ++R+GEIVGIAGVSGNGQQELLAA Sbjct: 242 RELRPQTTPGEVRMEVAGLSLPKAHAFATELHDIALQLRSGEIVGIAGVSGNGQQELLAA 301 Query: 306 LSGEDQRAAPNMIMLGGSAVGHLAPNPRRAKGLGLVPEERLGRGAVPTLSLSANMLLSHQ 365 LSGED RAA I +G V L P RR +GL VPEERLGRGAVP+LSL+AN LL+HQ Sbjct: 302 LSGEDTRAAAQTISIGNEPVAKLDPRARRKRGLSFVPEERLGRGAVPSLSLAANTLLTHQ 361 Query: 366 KVPYVKHGMIDFAYTRKVAAAIIERFKVKAGGPDALAKSLSGGNLQKFIVGREMERKPGV 425 + P+V+ G+ID K+A AII RF VKAGGPDALAKSLSGGNLQKFIVGRE+E P V Sbjct: 362 RAPHVRGGLIDKKAAAKLATAIISRFGVKAGGPDALAKSLSGGNLQKFIVGREIECAPRV 421 Query: 426 FIVAQPTWGVDVGAAAQIHAEILALKQEGCAVLVISEELDELFVLCDRLHVIAKGRLSPS 485 IVAQPTWGVDVGAAAQIH EILALK GCA+L++SEELDELF LCDRLHVIA GRLSPS Sbjct: 422 LIVAQPTWGVDVGAAAQIHNEILALKAGGCAILIVSEELDELFALCDRLHVIANGRLSPS 481 Query: 486 IPIEQATREQVGLWMSGLWNDDAPPAPNAAAEAAHG 521 P REQ+GLWMSG+W D AP + A++E AHG Sbjct: 482 TPTHATDREQIGLWMSGMW-DKAPVSTAASSEVAHG 516