BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0641.p (275 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08275794.1| Hydroxymethylpyrimidine ABC transporter, ATPa... 478 e-133 ref|YP_003777639.1| nitrate/sulfonate/bicarbonate ABC transporte... 473 e-131 ref|YP_004620401.1| nitrate/sulfonate/bicarbonate ABC transporte... 415 e-114 ref|YP_001795801.1| ABC transporter ATP-binding protein [Cupriav... 414 e-114 ref|YP_724986.1| ABC transporter ATPase [Ralstonia eutropha H16]... 411 e-113 >ref|ZP_08275794.1| Hydroxymethylpyrimidine ABC transporter, ATPase component [Oxalobacteraceae bacterium IMCC9480] gb|EGF30737.1| Hydroxymethylpyrimidine ABC transporter, ATPase component [Oxalobacteraceae bacterium IMCC9480] Length = 261 Score = 478 bits (1229), Expect = e-133, Method: Compositional matrix adjust. Identities = 227/258 (87%), Positives = 244/258 (94%) Query: 18 TFIDFRRVFLSYDGSDEFAVEDISLQTKQGEFIAIVGPSGCGKSTFMKLATGLKRPTRGS 77 +F+DF+ V+L+YDG+ +FAVEDISLQT+ GEFIAIVGPSGCGKSTFMKLATGLK+PTRGS Sbjct: 4 SFVDFKNVYLAYDGTTDFAVEDISLQTQAGEFIAIVGPSGCGKSTFMKLATGLKKPTRGS 63 Query: 78 ISIAGADVTGPLKFVGMAFQAPTLLPWRTTLDNVLLPLEIVEPYRRDFKKNKAQYAERAL 137 I I GA VTGPLK VGMAFQAPTLLPWRTTLDNVLLPLEIVEPYRR FK++KA ERAL Sbjct: 64 IHIDGAAVTGPLKIVGMAFQAPTLLPWRTTLDNVLLPLEIVEPYRRHFKRDKAINIERAL 123 Query: 138 KLLKTVGLDGYADKFPWELSGGMQQRASICRALIHEPRMLLLDEPFGALDAFTREELWCV 197 LLKTVGLDGYADKFPW+LSGGMQQRASICRALIHEP+MLLLDEPFGALDAFTREELWCV Sbjct: 124 ALLKTVGLDGYADKFPWQLSGGMQQRASICRALIHEPKMLLLDEPFGALDAFTREELWCV 183 Query: 198 LRDLWTERKFNVILVTHDLREAAFLADTIYVMSKRPGRIVARKENPLPRPRELELTYTDP 257 LRDLWTER+FNVILVTHDLREAAFLADTIYVMSKRPGRIVARKENPLPRPR+LELTYT+P Sbjct: 184 LRDLWTERRFNVILVTHDLREAAFLADTIYVMSKRPGRIVARKENPLPRPRDLELTYTEP 243 Query: 258 FNALVHELREHIGRVRNT 275 F ALVHELREHIGRVR + Sbjct: 244 FTALVHELREHIGRVRTS 261 >ref|YP_003777639.1| nitrate/sulfonate/bicarbonate ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ65731.1| ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 261 Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust. Identities = 225/260 (86%), Positives = 240/260 (92%) Query: 16 ADTFIDFRRVFLSYDGSDEFAVEDISLQTKQGEFIAIVGPSGCGKSTFMKLATGLKRPTR 75 ++ F+DFR V+L+YDG+ EFAVEDI LQT+ GEFIAIVGPSGCGKSTFMKLATGLK+P R Sbjct: 2 SEPFVDFRHVYLAYDGAAEFAVEDIDLQTRAGEFIAIVGPSGCGKSTFMKLATGLKQPNR 61 Query: 76 GSISIAGADVTGPLKFVGMAFQAPTLLPWRTTLDNVLLPLEIVEPYRRDFKKNKAQYAER 135 GS+ I G VTGPLKFVGMAFQAPTLLPWRTTLDNVLLPLEIVEPYRRDFK+ KA+Y ER Sbjct: 62 GSVVIDGQTVTGPLKFVGMAFQAPTLLPWRTTLDNVLLPLEIVEPYRRDFKQKKAEYTER 121 Query: 136 ALKLLKTVGLDGYADKFPWELSGGMQQRASICRALIHEPRMLLLDEPFGALDAFTREELW 195 AL LLKTVGLDGYADKFPW+LSGGMQQRASICRALIHEP+MLLLDEPFGALDAFTREELW Sbjct: 122 ALSLLKTVGLDGYADKFPWQLSGGMQQRASICRALIHEPKMLLLDEPFGALDAFTREELW 181 Query: 196 CVLRDLWTERKFNVILVTHDLREAAFLADTIYVMSKRPGRIVARKENPLPRPRELELTYT 255 CVLRDLW ER+FNVILVTHDLREAAFLADTIYVMSKRPGRIV R+ENPLPRP LE TYT Sbjct: 182 CVLRDLWAERRFNVILVTHDLREAAFLADTIYVMSKRPGRIVVRRENPLPRPCPLETTYT 241 Query: 256 DPFNALVHELREHIGRVRNT 275 D FNALVHELREHIG VRNT Sbjct: 242 DGFNALVHELREHIGHVRNT 261 >ref|YP_004620401.1| nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein [Ramlibacter tataouinensis TTB310] gb|AEG94382.1| candidate ABC type nitrate/sulfonate/bicarbonate transport system, ATP-binding component [Ramlibacter tataouinensis TTB310] Length = 282 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 201/270 (74%), Positives = 224/270 (82%), Gaps = 7/270 (2%) Query: 13 DASAD---TFIDFRRVFLSYD----GSDEFAVEDISLQTKQGEFIAIVGPSGCGKSTFMK 65 D +AD F+DF V+L+Y+ FAVE I LQ +QGEFIAIVGPSGCGKSTFMK Sbjct: 7 DGAADRGAVFVDFSDVWLAYNEELLAQGHFAVEAIDLQVRQGEFIAIVGPSGCGKSTFMK 66 Query: 66 LATGLKRPTRGSISIAGADVTGPLKFVGMAFQAPTLLPWRTTLDNVLLPLEIVEPYRRDF 125 LATGLKRP+RG I I G VTGPLK GMAFQAP+LLPWRTT+DNVLLPLEIVEPYRR F Sbjct: 67 LATGLKRPSRGRILIDGQPVTGPLKISGMAFQAPSLLPWRTTVDNVLLPLEIVEPYRRSF 126 Query: 126 KKNKAQYAERALKLLKTVGLDGYADKFPWELSGGMQQRASICRALIHEPRMLLLDEPFGA 185 K KA+YAERA LL+ VGL GY DKFPW+LSGGMQQRASICRALIHEP+MLLLDEPFGA Sbjct: 127 KARKAEYAERARALLRKVGLGGYEDKFPWQLSGGMQQRASICRALIHEPKMLLLDEPFGA 186 Query: 186 LDAFTREELWCVLRDLWTERKFNVILVTHDLREAAFLADTIYVMSKRPGRIVARKENPLP 245 LDAFTREELWC+LRDLWTE++FNVILVTHDLRE+ FLADT+YVMSK PGR + R+E LP Sbjct: 187 LDAFTREELWCILRDLWTEQRFNVILVTHDLRESVFLADTVYVMSKSPGRFMVRREIALP 246 Query: 246 RPRELELTYTDPFNALVHELREHIGRVRNT 275 RPRELE+TYT F +VHELR HIG +R T Sbjct: 247 RPRELEVTYTREFTDIVHELRGHIGAIRKT 276 >ref|YP_001795801.1| ABC transporter ATP-binding protein [Cupriavidus taiwanensis LMG 19424] emb|CAP63079.1| putative ABC TRANSPORTER, ATP-BINDING component [Cupriavidus taiwanensis LMG 19424] Length = 280 Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust. Identities = 198/274 (72%), Positives = 228/274 (83%), Gaps = 4/274 (1%) Query: 5 ADTIEAAVDASADTFIDFRRVFLSYDGS----DEFAVEDISLQTKQGEFIAIVGPSGCGK 60 A+++ AA A + F+DF RV+L+YD + EFAVED+SLQ GEFIAIVGPSGCGK Sbjct: 6 AESMPAAATAPVEPFVDFNRVWLAYDDALARQGEFAVEDLSLQAAPGEFIAIVGPSGCGK 65 Query: 61 STFMKLATGLKRPTRGSISIAGADVTGPLKFVGMAFQAPTLLPWRTTLDNVLLPLEIVEP 120 STFMKLATGL+ T G++ +AG V+GPLK VGMAFQAPTLLPWRTTLDNV+LPLEIVEP Sbjct: 66 STFMKLATGLRPATHGTVKVAGQKVSGPLKQVGMAFQAPTLLPWRTTLDNVMLPLEIVEP 125 Query: 121 YRRDFKKNKAQYAERALKLLKTVGLDGYADKFPWELSGGMQQRASICRALIHEPRMLLLD 180 YR + + +Y +RA +LL TVGL GY DK+PW+LSGGMQQRASICRALIH+PRMLLLD Sbjct: 126 YRSTLRARRDEYVDRARRLLHTVGLGGYEDKYPWQLSGGMQQRASICRALIHQPRMLLLD 185 Query: 181 EPFGALDAFTREELWCVLRDLWTERKFNVILVTHDLREAAFLADTIYVMSKRPGRIVARK 240 EPFGALDAFTREELWCVLRDLW ++FNVILVTHDLREA FLADT+YVMS+RPGRI+ RK Sbjct: 186 EPFGALDAFTREELWCVLRDLWQAQRFNVILVTHDLREAVFLADTVYVMSQRPGRILLRK 245 Query: 241 ENPLPRPRELELTYTDPFNALVHELREHIGRVRN 274 E LPRPR+LELTYT+PF LVH LRE IG VR Sbjct: 246 EIHLPRPRDLELTYTEPFAGLVHALREKIGHVRQ 279 >ref|YP_724986.1| ABC transporter ATPase [Ralstonia eutropha H16] emb|CAJ91618.1| ABC-type transporter, ATPase component: TauT family [Ralstonia eutropha H16] Length = 284 Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust. Identities = 199/262 (75%), Positives = 220/262 (83%), Gaps = 4/262 (1%) Query: 17 DTFIDFRRVFLSYDG----SDEFAVEDISLQTKQGEFIAIVGPSGCGKSTFMKLATGLKR 72 + F+DF RV+L+Y+ EFAVEDISLQ GEFIAIVGPSGCGKSTFMKLATGLK Sbjct: 22 EPFVDFNRVWLAYNDELAHKGEFAVEDISLQVAPGEFIAIVGPSGCGKSTFMKLATGLKA 81 Query: 73 PTRGSISIAGADVTGPLKFVGMAFQAPTLLPWRTTLDNVLLPLEIVEPYRRDFKKNKAQY 132 TRG + IAG VTGPLK VGMAFQAPTLLPWRTTLDNV+LPLEIVEPYR + + +Y Sbjct: 82 ATRGVVRIAGEKVTGPLKQVGMAFQAPTLLPWRTTLDNVMLPLEIVEPYRSTLRARRDEY 141 Query: 133 AERALKLLKTVGLDGYADKFPWELSGGMQQRASICRALIHEPRMLLLDEPFGALDAFTRE 192 ER+ KLL TVGL GY DK+PW+LSGGMQQRASICRAL+HEPRMLLLDEPFGALDAFTRE Sbjct: 142 VERSRKLLHTVGLAGYEDKYPWQLSGGMQQRASICRALVHEPRMLLLDEPFGALDAFTRE 201 Query: 193 ELWCVLRDLWTERKFNVILVTHDLREAAFLADTIYVMSKRPGRIVARKENPLPRPRELEL 252 ELWCVLRDLW ++FNVILVTHDLREA FLADT+YVMS+RPGRI+ RKE LPRPR+LEL Sbjct: 202 ELWCVLRDLWQAQRFNVILVTHDLREAVFLADTVYVMSQRPGRILMRKEIDLPRPRDLEL 261 Query: 253 TYTDPFNALVHELREHIGRVRN 274 TYT+PF LVH LRE IG VR Sbjct: 262 TYTEPFADLVHMLREKIGHVRQ 283