BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0640.p (348 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777638.1| nitrate/sulfonate/bicarbonate ABC transporte... 574 e-162 ref|ZP_08275793.1| twin-arginine translocation pathway signal [O... 527 e-147 ref|YP_582547.1| ABC-type nitrate/sulfonate/bicarbonate transpor... 457 e-126 ref|YP_001795800.1| precursor ABC-type nitrate/sulfonate/bicarbo... 456 e-126 ref|YP_724985.1| ABC transporter periplasmic protein [Ralstonia ... 453 e-125 >ref|YP_003777638.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ65730.1| ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 373 Score = 574 bits (1480), Expect = e-162, Method: Compositional matrix adjust. Identities = 282/349 (80%), Positives = 316/349 (90%), Gaps = 6/349 (1%) Query: 1 MHANKLFKFTAALLLS-AACSASFAQETKIKFQLDWRFEGPSALFLVAKSKGYFAQEKLD 59 M + + +AALLL + S++FAQ+T+IKFQLDWRFEGP+ALFLVAKSKGYFAQEKLD Sbjct: 30 MRSFRFLGCSAALLLGLVSASSTFAQDTRIKFQLDWRFEGPAALFLVAKSKGYFAQEKLD 89 Query: 60 VVIDAGSGSGNAVNRVASGTYDMGFADMAALMEFTANNPGSPGKPMAVMMVYNDTPAAIF 119 V IDAG+GSGNAVNRVASGTYDMGFADMAALMEFTANNP +PGKP+AVMMVYNDTPAA+F Sbjct: 90 VTIDAGNGSGNAVNRVASGTYDMGFADMAALMEFTANNPDAPGKPVAVMMVYNDTPAAVF 149 Query: 120 SLKKTGIKTPADLAGKKLGSPVFDAGRRGYPIFAKANGLDASKANWISMDPPLRETMLAR 179 SLKK+GIK PADLAGKKLG+PVFDAGRR YPIFAKANGLDASKA W SMDPPLRETML Sbjct: 150 SLKKSGIKKPADLAGKKLGAPVFDAGRRAYPIFAKANGLDASKAQWTSMDPPLRETML-- 207 Query: 180 GPXARGDVDAITGFYFTSLLNLNARGIKDADINVMMYPDYGVKLYGNAIIANESLMKTNP 239 ARGDVDAITGFYFTSLLNLNARGIKD DINVMMYPDYGV+LYGN IIA+++++K P Sbjct: 208 ---ARGDVDAITGFYFTSLLNLNARGIKDEDINVMMYPDYGVRLYGNTIIASDTMVKNKP 264 Query: 240 EALRGFLRAFAKATKDVLADPEAAIKVLKERDGLIDAKLELRRLKLAISSAIATPHAKAE 299 EA++GFLRAFAKA++DV+A PEAAIKVLKERDGLID KLELRRLKLAI+SAIATPHAK+E Sbjct: 265 EAIKGFLRAFAKASRDVMAHPEAAIKVLKERDGLIDEKLELRRLKLAIASAIATPHAKSE 324 Query: 300 GYGQVFLPRLTLMASQVSDAYGTKTRVNAEKIWTPAYLPSKELLNVFGK 348 GYGQV+ PRLTLMASQVSDAYGTKTRVNA+KIW ++LP+K L+VF K Sbjct: 325 GYGQVYGPRLTLMASQVSDAYGTKTRVNADKIWNGSFLPTKAELDVFPK 373 >ref|ZP_08275793.1| twin-arginine translocation pathway signal [Oxalobacteraceae bacterium IMCC9480] gb|EGF30736.1| twin-arginine translocation pathway signal [Oxalobacteraceae bacterium IMCC9480] Length = 321 Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust. Identities = 253/325 (77%), Positives = 289/325 (88%), Gaps = 5/325 (1%) Query: 24 AQETKIKFQLDWRFEGPSALFLVAKSKGYFAQEKLDVVIDAGSGSGNAVNRVASGTYDMG 83 A++TKIKFQLDWRFEGP+ALFLVAKSKGYF QE+LDV IDAG+GSGNAVNRVASG YDMG Sbjct: 2 AEDTKIKFQLDWRFEGPAALFLVAKSKGYFTQEQLDVTIDAGNGSGNAVNRVASGAYDMG 61 Query: 84 FADMAALMEFTANNPGSPGKPMAVMMVYNDTPAAIFSLKKTGIKTPADLAGKKLGSPVFD 143 FADMAALMEF NNP +P KP+ VMMVYNDTPAA+F+LKK+GIKTPADLAGKKLG+PVFD Sbjct: 62 FADMAALMEFVGNNPTAPSKPVGVMMVYNDTPAAVFALKKSGIKTPADLAGKKLGAPVFD 121 Query: 144 AGRRGYPIFAKANGLDASKANWISMDPPLRETMLARGPXARGDVDAITGFYFTSLLNLNA 203 AGRR YP+FAKANGLDA+KANWISMDP LRETML RGDVDAITGFYFTSLLNLNA Sbjct: 122 AGRRAYPVFAKANGLDATKANWISMDPALRETML-----VRGDVDAITGFYFTSLLNLNA 176 Query: 204 RGIKDADINVMMYPDYGVKLYGNAIIANESLMKTNPEALRGFLRAFAKATKDVLADPEAA 263 RGIKD D+ VM+YP+YGVKLYGNAIIA+++++K PEA++GFLRAFAKA KDV+ADP+AA Sbjct: 177 RGIKDEDVVVMLYPNYGVKLYGNAIIASDTMVKQKPEAIKGFLRAFAKAAKDVMADPDAA 236 Query: 264 IKVLKERDGLIDAKLELRRLKLAISSAIATPHAKAEGYGQVFLPRLTLMASQVSDAYGTK 323 KV+KERDGL+D KLE RRLKLAI+SAIATP+AKAEG+GQV PRL+LMASQVSD Y TK Sbjct: 237 AKVVKERDGLVDEKLEARRLKLAIASAIATPNAKAEGFGQVSAPRLSLMASQVSDTYATK 296 Query: 324 TRVNAEKIWTPAYLPSKELLNVFGK 348 TRV+ +W ++LP+K LNVF K Sbjct: 297 TRVDPNTVWNGSFLPAKAALNVFPK 321 >ref|YP_582547.1| ABC-type nitrate/sulfonate/bicarbonate transport system periplasmic protein: TauT family [Cupriavidus metallidurans CH34] gb|ABF07278.1| ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component: TauT family [Cupriavidus metallidurans CH34] Length = 352 Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust. Identities = 219/336 (65%), Positives = 270/336 (80%), Gaps = 7/336 (2%) Query: 13 LLLSAAC--SASFAQETKIKFQLDWRFEGPSALFLVAKSKGYFAQEKLDVVIDAGSGSGN 70 ++LS C +A TKI+FQLDWRFEGPSALFL+ + KGY+ EKLDV IDAG+GSGN Sbjct: 21 MVLSTLCAGTAQAQTATKIRFQLDWRFEGPSALFLLGEQKGYYKAEKLDVSIDAGNGSGN 80 Query: 71 AVNRVASGTYDMGFADMAALMEFTANNPGSPGKPMAVMMVYNDTPAAIFSLKKTGIKTPA 130 VNRVASGTYDMGFAD+A++MEF NNP + KP+AVMMVYN+TPAA+ +LKK+GI+ P Sbjct: 81 VVNRVASGTYDMGFADLASVMEFYGNNPDAKNKPVAVMMVYNNTPAAVLALKKSGIRAPK 140 Query: 131 DLAGKKLGSPVFDAGRRGYPIFAKANGLDASKANWISMDPPLRETMLARGPXARGDVDAI 190 DL GKKLG+PVFDAGRR +PIFAKANGL A+ NW +MDP LRETML RGD+DAI Sbjct: 141 DLTGKKLGAPVFDAGRRAFPIFAKANGLQAASFNWQAMDPTLRETML-----TRGDLDAI 195 Query: 191 TGFYFTSLLNLNARGIKDADINVMMYPDYGVKLYGNAIIANESLMKTNPEALRGFLRAFA 250 TGF FTS+LNLNARG+KD DI V+ YP YGVKLYGNAIIA+E +K +PEA++ FLRAFA Sbjct: 196 TGFSFTSILNLNARGVKDEDIVVLPYPQYGVKLYGNAIIASEQFLKAHPEAVKAFLRAFA 255 Query: 251 KATKDVLADPEAAIKVLKERDGLIDAKLELRRLKLAISSAIATPHAKAEGYGQVFLPRLT 310 K+ KDV+A+PE IK +K RDG+ID KLE+RRLK+A+ + + +P AKAEG+G+V PRL+ Sbjct: 256 KSAKDVIANPEEGIKAVKARDGIIDEKLEVRRLKMALDAVVKSPDAKAEGFGRVNKPRLS 315 Query: 311 LMASQVSDAYGTKTRVNAEKIWTPAYLPSKELLNVF 346 LMASQV+DA+ TK R+N + +WT AYLPS L+V Sbjct: 316 LMASQVADAFATKGRINPDALWTDAYLPSAAELDVL 351 >ref|YP_001795800.1| precursor ABC-type nitrate/sulfonate/bicarbonate transporter, periplasmic component [Cupriavidus taiwanensis LMG 19424] emb|CAP63078.1| putative precursor ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component [Cupriavidus taiwanensis LMG 19424] Length = 380 Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust. Identities = 221/348 (63%), Positives = 274/348 (78%), Gaps = 12/348 (3%) Query: 6 LFKFTAALLLSAACSASFAQ-------ETKIKFQLDWRFEGPSALFLVAKSKGYFAQEKL 58 L K A L S S SFA T+++FQLDWRFEGP+ALFL+ + KGY+ EKL Sbjct: 37 LLKLGAMLGTSLVLSTSFAGAAHAQAASTRVRFQLDWRFEGPAALFLLGEQKGYYKAEKL 96 Query: 59 DVVIDAGSGSGNAVNRVASGTYDMGFADMAALMEFTANNPGSPGKPMAVMMVYNDTPAAI 118 +V IDAG+GSGN VNRVASGTYDMGFADM+++MEF NNP + KP+AVMMVYN+TPAAI Sbjct: 97 EVAIDAGNGSGNVVNRVASGTYDMGFADMSSVMEFYGNNPDAKNKPVAVMMVYNNTPAAI 156 Query: 119 FSLKKTGIKTPADLAGKKLGSPVFDAGRRGYPIFAKANGLDASKANWISMDPPLRETMLA 178 +LKK+GI+ P DLAGK++G+PVFDAGRR +PIFAKANGL AS NW +MDP LRETML Sbjct: 157 LALKKSGIRAPKDLAGKRMGAPVFDAGRRAFPIFAKANGLQASSFNWQAMDPTLRETML- 215 Query: 179 RGPXARGDVDAITGFYFTSLLNLNARGIKDADINVMMYPDYGVKLYGNAIIANESLMKTN 238 RGD+DAITGF FTS+LNLNARG+KD DI V+ YP +GVKLYGNA+IA+E+ ++ N Sbjct: 216 ----VRGDLDAITGFSFTSILNLNARGVKDEDIVVLPYPQFGVKLYGNAVIASEAFIRQN 271 Query: 239 PEALRGFLRAFAKATKDVLADPEAAIKVLKERDGLIDAKLELRRLKLAISSAIATPHAKA 298 PEA++ FLRAF+K+ +DV+A PE I+ LK RDG+ID KLE RRLKLA+ S + +P AKA Sbjct: 272 PEAVKAFLRAFSKSARDVIARPEEGIRALKARDGIIDEKLETRRLKLALDSVVRSPDAKA 331 Query: 299 EGYGQVFLPRLTLMASQVSDAYGTKTRVNAEKIWTPAYLPSKELLNVF 346 EG+G+V PRL+LMASQV+DA+GTK R+NA+ +WT AYLPS L+V Sbjct: 332 EGFGRVSKPRLSLMASQVADAFGTKGRINADALWTDAYLPSAAELDVL 379 >ref|YP_724985.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] emb|CAJ91617.1| ABC-type transporter, periplasmic component: TauT family [Ralstonia eutropha H16] Length = 380 Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust. Identities = 212/320 (66%), Positives = 264/320 (82%), Gaps = 5/320 (1%) Query: 27 TKIKFQLDWRFEGPSALFLVAKSKGYFAQEKLDVVIDAGSGSGNAVNRVASGTYDMGFAD 86 TK++FQLDWRFEGP+ALFL+ + KGY+ EKLDV IDAG+GSGN VNRVASGTYDMGFAD Sbjct: 65 TKVRFQLDWRFEGPAALFLLGEQKGYYKAEKLDVSIDAGNGSGNVVNRVASGTYDMGFAD 124 Query: 87 MAALMEFTANNPGSPGKPMAVMMVYNDTPAAIFSLKKTGIKTPADLAGKKLGSPVFDAGR 146 M+++MEF NNP + KP+AVMMVYN+TPAA+ +LKK+GI+ P DLAGK++G+PVFDAGR Sbjct: 125 MSSVMEFYGNNPDAKNKPVAVMMVYNNTPAAVLALKKSGIRAPKDLAGKRMGAPVFDAGR 184 Query: 147 RGYPIFAKANGLDASKANWISMDPPLRETMLARGPXARGDVDAITGFYFTSLLNLNARGI 206 R +PIFA+ANGL AS NW +MDP LRETML RGD+DAITGF FTS+LNLNARG+ Sbjct: 185 RAFPIFARANGLQASSFNWQAMDPTLRETML-----TRGDLDAITGFSFTSILNLNARGV 239 Query: 207 KDADINVMMYPDYGVKLYGNAIIANESLMKTNPEALRGFLRAFAKATKDVLADPEAAIKV 266 KD DI V+ YP +GVKLYGNA+IA+E MK NPEA++ FLRAF+K+ +DV+A PE IK Sbjct: 240 KDEDIVVLPYPQFGVKLYGNAVIASEDFMKKNPEAVKAFLRAFSKSARDVIARPEEGIKA 299 Query: 267 LKERDGLIDAKLELRRLKLAISSAIATPHAKAEGYGQVFLPRLTLMASQVSDAYGTKTRV 326 +K RDG+ID KLE+RRLKLA+ S + +P AKAEG+G+V PRL+LMASQV+DA+GTK R+ Sbjct: 300 VKARDGIIDEKLEVRRLKLALDSVVKSPDAKAEGFGRVSEPRLSLMASQVADAFGTKGRI 359 Query: 327 NAEKIWTPAYLPSKELLNVF 346 N + +WT A+LPS L+V Sbjct: 360 NPDALWTDAFLPSAAELDVL 379