BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0635.p (312 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777635.1| xylanase/chitin deacetylase [Herbaspirillum ... 552 e-155 ref|YP_002981890.1| urate catabolism protein [Ralstonia picketti... 526 e-147 ref|YP_001899826.1| urate catabolism protein [Ralstonia picketti... 522 e-146 ref|YP_583037.1| putative xylanase/chitin deacetylase [Cupriavid... 522 e-146 ref|YP_002005022.1| polysaccharide deacetylase; xylanase/chitin ... 520 e-145 >ref|YP_003777635.1| xylanase/chitin deacetylase [Herbaspirillum seropedicae SmR1] gb|ADJ65727.1| xylanase/chitin deacetylase protein [Herbaspirillum seropedicae SmR1] Length = 310 Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust. Identities = 260/303 (85%), Positives = 277/303 (91%) Query: 9 NYPRDLIGYGRNVPHANWPGRARIAVQFVLNYEEGGENSVLHGDPASEQFLSEIIGAAAY 68 +YPRDL GYGRN PHA WPG+AR+A+QFVLNYEEGGEN VLHGD ASEQFLSEI+GAAAY Sbjct: 6 SYPRDLAGYGRNPPHARWPGQARVALQFVLNYEEGGENCVLHGDAASEQFLSEIVGAAAY 65 Query: 69 PARHLSMESIYEYGSRVGVWRILREFEKRRLPLTVFGIAMALQRHPEVTRAFVELGHEIA 128 PARH+SMESIYEYGSRVGVWRILREFEKR LPLTVFG+AMALQR PEVT+AFVELGHEIA Sbjct: 66 PARHMSMESIYEYGSRVGVWRILREFEKRGLPLTVFGVAMALQRSPEVTQAFVELGHEIA 125 Query: 129 CHGLRWIHYQNMDIETEREHMRAAVEIFRELTGMHPQGWYTGRDSPNTRRLVVEHGGFAY 188 CHGLRWIHYQ+MDIETER HMR AV+IFRELTG P GWYTGRDSPNTR+LVVEHGGF Y Sbjct: 126 CHGLRWIHYQSMDIETERAHMREAVQIFRELTGSAPLGWYTGRDSPNTRQLVVEHGGFVY 185 Query: 189 DSDYYGDDLPFWTRVALADGSEQAHLVVPYTLDSNDMRFATPQGFNTGEQFFQYLKDSFD 248 DSDYYGDDLPFWT V A G + HLVVPYTLDSNDMRFATPQGFNT E FFQYLKDSFD Sbjct: 186 DSDYYGDDLPFWTEVETAAGVKAPHLVVPYTLDSNDMRFATPQGFNTSEHFFQYLKDSFD 245 Query: 249 VLYAEGEEAPKMLSVGMHCRLLGRPGRFAALQRFLDYVQSHERVWICRRIDIANHWREQH 308 VLY EGEEAPKMLS+GMHCRLLGRPGRF ALQRFLDYVQSH++VWICRRIDIA HWR+ H Sbjct: 246 VLYEEGEEAPKMLSIGMHCRLLGRPGRFRALQRFLDYVQSHDKVWICRRIDIAEHWRKVH 305 Query: 309 PYA 311 PY+ Sbjct: 306 PYS 308 >ref|YP_002981890.1| urate catabolism protein [Ralstonia pickettii 12D] gb|ACS63218.1| urate catabolism protein [Ralstonia pickettii 12D] Length = 320 Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust. Identities = 247/307 (80%), Positives = 271/307 (88%), Gaps = 4/307 (1%) Query: 9 NYPRDLIGYGRNVPHANWPGRARIAVQFVLNYEEGGENSVLHGDPASEQFLSEIIGAAAY 68 NYPRDLIGYG+N P+ANWPG AR+A+QFVLNYEEGGEN VLHGD ASEQFLSEIIGAAAY Sbjct: 5 NYPRDLIGYGKNPPNANWPGGARVALQFVLNYEEGGENCVLHGDAASEQFLSEIIGAAAY 64 Query: 69 PARHLSMESIYEYGSRVGVWRILREFEKRRLPLTVFGIAMALQRHPEVTRAFVELGHEIA 128 PARH+SME IYEYGSR GVWRILREFEKR LPLTVFG++MALQRHP+VT+AFV+LGHEIA Sbjct: 65 PARHMSMEGIYEYGSRAGVWRILREFEKRGLPLTVFGVSMALQRHPDVTQAFVDLGHEIA 124 Query: 129 CHGLRWIHYQNMDIETEREHMRAAVEIFRELTGMHPQGWYTGRDSPNTRRLVVEHGGFAY 188 CHG RWIHYQN+D TEREHMR VEI RELTG P GWYTGRDSPNTRRLVVEHGGFAY Sbjct: 125 CHGWRWIHYQNIDEATEREHMRIGVEIIRELTGNAPLGWYTGRDSPNTRRLVVEHGGFAY 184 Query: 189 DSDYYGDDLPFWTRVALADGSEQAHLVVPYTLDSNDMRFATPQGFNTGEQFFQYLKDSFD 248 D+DYYGDDLPFWT V + G + HLVVPYTLD+NDMRFA+PQGFNT + F+QYLKD+FD Sbjct: 185 DADYYGDDLPFWTEVETSSGEHKPHLVVPYTLDTNDMRFASPQGFNTADHFYQYLKDAFD 244 Query: 249 VLYAEGE----EAPKMLSVGMHCRLLGRPGRFAALQRFLDYVQSHERVWICRRIDIANHW 304 VLY EG+ PKMLS+GMHCRLLGRPGRF ALQRFLDYVQSH++VWICRRIDIA HW Sbjct: 245 VLYEEGDPNGLAQPKMLSIGMHCRLLGRPGRFRALQRFLDYVQSHDKVWICRRIDIAQHW 304 Query: 305 REQHPYA 311 + HPYA Sbjct: 305 IQNHPYA 311 >ref|YP_001899826.1| urate catabolism protein [Ralstonia pickettii 12J] ref|ZP_07676540.1| urate catabolism protein [Ralstonia sp. 5_7_47FAA] gb|ACD27394.1| urate catabolism protein [Ralstonia pickettii 12J] gb|EFP65112.1| urate catabolism protein [Ralstonia sp. 5_7_47FAA] Length = 320 Score = 522 bits (1344), Expect = e-146, Method: Compositional matrix adjust. Identities = 244/307 (79%), Positives = 269/307 (87%), Gaps = 4/307 (1%) Query: 9 NYPRDLIGYGRNVPHANWPGRARIAVQFVLNYEEGGENSVLHGDPASEQFLSEIIGAAAY 68 NYPRDLIGYG+N P+ANWPG AR+A+QFVLNYEEGGEN VLHGD SEQFLSEIIGAAAY Sbjct: 5 NYPRDLIGYGKNPPNANWPGGARVALQFVLNYEEGGENCVLHGDAGSEQFLSEIIGAAAY 64 Query: 69 PARHLSMESIYEYGSRVGVWRILREFEKRRLPLTVFGIAMALQRHPEVTRAFVELGHEIA 128 PARH+SME IYEYGSR GVWRILREFEKR LPLT+FG++MALQRHP+VT+AFV+LGHEIA Sbjct: 65 PARHMSMEGIYEYGSRAGVWRILREFEKRGLPLTIFGVSMALQRHPDVTQAFVDLGHEIA 124 Query: 129 CHGLRWIHYQNMDIETEREHMRAAVEIFRELTGMHPQGWYTGRDSPNTRRLVVEHGGFAY 188 CHG RWIHYQN+D TEREHMR VEI RELTG P GWYTGRDSPNTRRLVVEHGGFAY Sbjct: 125 CHGWRWIHYQNIDEATEREHMRIGVEIIRELTGNAPLGWYTGRDSPNTRRLVVEHGGFAY 184 Query: 189 DSDYYGDDLPFWTRVALADGSEQAHLVVPYTLDSNDMRFATPQGFNTGEQFFQYLKDSFD 248 D+DYYGDDLPFWT V + G + HLVVPYTLD+NDMRFA+PQGFNT + F+QYLKD+FD Sbjct: 185 DADYYGDDLPFWTEVETSSGEHKPHLVVPYTLDTNDMRFASPQGFNTADHFYQYLKDAFD 244 Query: 249 VLYAEGE----EAPKMLSVGMHCRLLGRPGRFAALQRFLDYVQSHERVWICRRIDIANHW 304 VLY EG+ PKMLS+GMHCRLLGRP RF ALQRFLDYVQSH++VWICRRIDIA HW Sbjct: 245 VLYEEGDPNGLAQPKMLSIGMHCRLLGRPARFRALQRFLDYVQSHDKVWICRRIDIAQHW 304 Query: 305 REQHPYA 311 + HPYA Sbjct: 305 IQNHPYA 311 >ref|YP_583037.1| putative xylanase/chitin deacetylase [Cupriavidus metallidurans CH34] gb|ABF07768.1| predicted xylanase/chitin deacetylase [Cupriavidus metallidurans CH34] Length = 314 Score = 522 bits (1344), Expect = e-146, Method: Compositional matrix adjust. Identities = 245/306 (80%), Positives = 269/306 (87%), Gaps = 4/306 (1%) Query: 9 NYPRDLIGYGRNVPHANWPGRARIAVQFVLNYEEGGENSVLHGDPASEQFLSEIIGAAAY 68 NYPRDLIGYG PHA WPG ARIA+QFVLNYEEGGEN VLHGD ASEQFLSEI+GAAAY Sbjct: 5 NYPRDLIGYGAQPPHARWPGGARIALQFVLNYEEGGENCVLHGDAASEQFLSEIVGAAAY 64 Query: 69 PARHLSMESIYEYGSRVGVWRILREFEKRRLPLTVFGIAMALQRHPEVTRAFVELGHEIA 128 PARH+SME IYEYGSR GVWR+LREFE+R+LPLTVFG++MALQRHPE+TRAFVELGHEIA Sbjct: 65 PARHMSMEGIYEYGSRAGVWRLLREFEQRKLPLTVFGVSMALQRHPELTRAFVELGHEIA 124 Query: 129 CHGLRWIHYQNMDIETEREHMRAAVEIFRELTGMHPQGWYTGRDSPNTRRLVVEHGGFAY 188 CHG RWIHYQ +D EREHMR +EI +ELTG P GWYTGRDSPNTRRLVVEHGG Y Sbjct: 125 CHGYRWIHYQGIDEAIEREHMRIGMEIIKELTGEMPLGWYTGRDSPNTRRLVVEHGGLLY 184 Query: 189 DSDYYGDDLPFWTRVALADGSEQAHLVVPYTLDSNDMRFATPQGFNTGEQFFQYLKDSFD 248 D+DYYGDDLPFWT V + G ++ HLVVPYTLD+NDMRFATPQGFNTGEQFFQYLKD+FD Sbjct: 185 DADYYGDDLPFWTDVEITGGQKKPHLVVPYTLDTNDMRFATPQGFNTGEQFFQYLKDAFD 244 Query: 249 VLYAE----GEEAPKMLSVGMHCRLLGRPGRFAALQRFLDYVQSHERVWICRRIDIANHW 304 VLYAE G++ PKMLS+GMHCRLLGRPGRF ALQRFLDYVQSH++VWICRR+DIA HW Sbjct: 245 VLYAEGDPQGQDRPKMLSIGMHCRLLGRPGRFRALQRFLDYVQSHDKVWICRRVDIARHW 304 Query: 305 REQHPY 310 E HPY Sbjct: 305 IETHPY 310 >ref|YP_002005022.1| polysaccharide deacetylase; xylanase/chitin deacetylase [Cupriavidus taiwanensis LMG 19424] emb|CAQ68955.1| putative Polysaccharide deacetylase; xylanase/chitin deacetylase [Cupriavidus taiwanensis LMG 19424] Length = 316 Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust. Identities = 244/307 (79%), Positives = 268/307 (87%), Gaps = 4/307 (1%) Query: 9 NYPRDLIGYGRNVPHANWPGRARIAVQFVLNYEEGGENSVLHGDPASEQFLSEIIGAAAY 68 NYPRDLIGYG PHA WPG AR+A+QFVLNYEEGGEN VLHGD ASEQFLSEI+GAAAY Sbjct: 5 NYPRDLIGYGARPPHARWPGGARVALQFVLNYEEGGENCVLHGDAASEQFLSEIVGAAAY 64 Query: 69 PARHLSMESIYEYGSRVGVWRILREFEKRRLPLTVFGIAMALQRHPEVTRAFVELGHEIA 128 P RH+SME IYEYGSR GVWRILREFEKR LPLT+FG++MALQRHPE+TRAFVELGHEIA Sbjct: 65 PDRHMSMEGIYEYGSRAGVWRILREFEKRGLPLTIFGVSMALQRHPELTRAFVELGHEIA 124 Query: 129 CHGLRWIHYQNMDIETEREHMRAAVEIFRELTGMHPQGWYTGRDSPNTRRLVVEHGGFAY 188 CHG RWIHYQN+D TEREHMR ++I ++LTG P GWYTGRDSPNTRRLVVEHGGF Y Sbjct: 125 CHGWRWIHYQNIDEATEREHMRIGMQIIKDLTGELPLGWYTGRDSPNTRRLVVEHGGFLY 184 Query: 189 DSDYYGDDLPFWTRVALADGSEQAHLVVPYTLDSNDMRFATPQGFNTGEQFFQYLKDSFD 248 DSDYYGDDLPFWT V + G ++ HLVVPYTLDSNDMRFATPQGFNTGEQFFQYLKD+FD Sbjct: 185 DSDYYGDDLPFWTEVEVTGGEKKPHLVVPYTLDSNDMRFATPQGFNTGEQFFQYLKDAFD 244 Query: 249 VLYAE----GEEAPKMLSVGMHCRLLGRPGRFAALQRFLDYVQSHERVWICRRIDIANHW 304 VLY E G+++PKMLS+GMHCRLLGRPGRF ALQRFLDYVQ H++VWICRR+DIA HW Sbjct: 245 VLYEEGDPSGQDSPKMLSIGMHCRLLGRPGRFRALQRFLDYVQGHDKVWICRRVDIARHW 304 Query: 305 REQHPYA 311 HPY Sbjct: 305 AATHPYT 311