BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0627.p (260 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001351726.1| ABC transporter substrate binding protein [J... 453 e-125 ref|YP_003777627.1| amino acid ABC transporter/signal transducti... 448 e-124 ref|YP_004752057.1| twin-arginine translocation pathway signal [... 410 e-113 ref|ZP_06685209.1| amino acid ABC superfamily ATP binding casset... 395 e-108 gb|EGP46369.1| amino acid ABC transporter substrate-binding prot... 388 e-106 >ref|YP_001351726.1| ABC transporter substrate binding protein [Janthinobacterium sp. Marseille] gb|ABR90168.1| ABC transporter substrate binding protein [Janthinobacterium sp. Marseille] Length = 259 Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust. Identities = 225/260 (86%), Positives = 245/260 (94%), Gaps = 1/260 (0%) Query: 1 MKLSTLLLGLMAGALLISTSVARADALDDIQKAGVLRVAVPQDFPPFGSVTADLKPQGLD 60 MKLST+L+GLMAGALL+ T+VARADALDDIQK GVLRVAVPQDFPPFGSVT D+ PQGLD Sbjct: 1 MKLSTILIGLMAGALLL-TNVARADALDDIQKKGVLRVAVPQDFPPFGSVTTDMTPQGLD 59 Query: 61 IDVASLIAKKLGVKVELIPVTSANRVPYLQTRKVDLVISSMGKNAEREKVIDFTAAYAPF 120 IDVA+LIAKKLGVKVELIPVTSANR+PYLQT+KVDLVISSMGKN EREKVIDF+AAYAPF Sbjct: 60 IDVATLIAKKLGVKVELIPVTSANRIPYLQTKKVDLVISSMGKNPEREKVIDFSAAYAPF 119 Query: 121 FNGVFGPADQKVSGPADLAGKTIGVTRGSVEDLELSKIVPASATVKRYEDNNGTISSFLS 180 FNGVFGPADQKV+ PADLAGKTIGVTRGSVEDLELSKI P SAT+KRYEDNNGTISSFLS Sbjct: 120 FNGVFGPADQKVAAPADLAGKTIGVTRGSVEDLELSKIAPESATIKRYEDNNGTISSFLS 179 Query: 181 NQVQLVATGNVIAAAIIAKNPPKKPETKFLIKDSPCFIGLNKDEKKLQDKVNAVLAEIKK 240 NQVQLVATGNVIAAAIIAKNPPKKPETKFLIK+SPC IGLNK E+KL +KVNA++A+ KK Sbjct: 180 NQVQLVATGNVIAAAIIAKNPPKKPETKFLIKNSPCSIGLNKGEEKLLEKVNAIIAQAKK 239 Query: 241 NGELSALTVKWLGLPLPATL 260 +G L+ LT KWLGLPLPA+L Sbjct: 240 DGSLNTLTEKWLGLPLPASL 259 >ref|YP_003777627.1| amino acid ABC transporter/signal transduction system periplasmic protein/domain-containing protein [Herbaspirillum seropedicae SmR1] gb|ADJ65719.1| ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein [Herbaspirillum seropedicae SmR1] Length = 260 Score = 448 bits (1152), Expect = e-124, Method: Compositional matrix adjust. Identities = 222/260 (85%), Positives = 239/260 (91%) Query: 1 MKLSTLLLGLMAGALLISTSVARADALDDIQKAGVLRVAVPQDFPPFGSVTADLKPQGLD 60 MKL+ LLLGLMAGA++ S SVARADALDDIQK G LRVAVP DFPPFGSV ADLKPQGLD Sbjct: 1 MKLTKLLLGLMAGAMMFSASVARADALDDIQKHGTLRVAVPADFPPFGSVDADLKPQGLD 60 Query: 61 IDVASLIAKKLGVKVELIPVTSANRVPYLQTRKVDLVISSMGKNAEREKVIDFTAAYAPF 120 IDVA+LIAKKLGVKVELIPV+SANR+PYL T+KVDLVISSMGKNAEREKVIDF+AAYAPF Sbjct: 61 IDVATLIAKKLGVKVELIPVSSANRIPYLTTKKVDLVISSMGKNAEREKVIDFSAAYAPF 120 Query: 121 FNGVFGPADQKVSGPADLAGKTIGVTRGSVEDLELSKIVPASATVKRYEDNNGTISSFLS 180 FNGVFGPAD V ADLAGKTI VTRGSVEDLEL+KIVPASATVKRYEDNN TISSFLS Sbjct: 121 FNGVFGPADLSVKSAADLAGKTIAVTRGSVEDLELTKIVPASATVKRYEDNNSTISSFLS 180 Query: 181 NQVQLVATGNVIAAAIIAKNPPKKPETKFLIKDSPCFIGLNKDEKKLQDKVNAVLAEIKK 240 QVQLVATGNV+AAAIIA+NPPKKPETKFLIKDSPCFIGLNK EKKLQDKV+A+LAE KK Sbjct: 181 GQVQLVATGNVVAAAIIARNPPKKPETKFLIKDSPCFIGLNKGEKKLQDKVDAILAESKK 240 Query: 241 NGELSALTVKWLGLPLPATL 260 +G LSA++ KWLG+PLPA L Sbjct: 241 DGSLSAISQKWLGMPLPAGL 260 >ref|YP_004752057.1| twin-arginine translocation pathway signal [Collimonas fungivorans Ter331] gb|AEK61234.1| Twin-arginine translocation pathway signal [Collimonas fungivorans Ter331] Length = 259 Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust. Identities = 200/242 (82%), Positives = 227/242 (93%) Query: 19 TSVARADALDDIQKAGVLRVAVPQDFPPFGSVTADLKPQGLDIDVASLIAKKLGVKVELI 78 +S ARADAL+DI K+GVL+VAVPQDFPPFGSVT+DLKPQGLDIDVA+LIAKK+GVK+ELI Sbjct: 18 SSTARADALEDIVKSGVLKVAVPQDFPPFGSVTSDLKPQGLDIDVATLIAKKMGVKIELI 77 Query: 79 PVTSANRVPYLQTRKVDLVISSMGKNAEREKVIDFTAAYAPFFNGVFGPADQKVSGPADL 138 PVTSANRVPYLQT+KVDL+ISS+GKN EREKVI F+ AYAPF+NGVFG ADQKVS ADL Sbjct: 78 PVTSANRVPYLQTKKVDLIISSLGKNPEREKVIAFSDAYAPFYNGVFGGADQKVSSAADL 137 Query: 139 AGKTIGVTRGSVEDLELSKIVPASATVKRYEDNNGTISSFLSNQVQLVATGNVIAAAIIA 198 AGKT+GVTRG+VEDLEL+KI PASAT+KRYEDNNGTIS+FLS QVQLVATGNV+AAAIIA Sbjct: 138 AGKTVGVTRGAVEDLELTKIAPASATIKRYEDNNGTISAFLSGQVQLVATGNVVAAAIIA 197 Query: 199 KNPPKKPETKFLIKDSPCFIGLNKDEKKLQDKVNAVLAEIKKNGELSALTVKWLGLPLPA 258 KNPPKKPETKFLIK+SPC IGL+KDE KL +KVNA+LA+ KK+GEL+AL+VKWLGLPLPA Sbjct: 198 KNPPKKPETKFLIKNSPCSIGLSKDEPKLLEKVNAILAQTKKDGELNALSVKWLGLPLPA 257 Query: 259 TL 260 L Sbjct: 258 NL 259 >ref|ZP_06685209.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] gb|EFF77826.1| amino acid ABC superfamily ATP binding cassette transporter, binding protein [Achromobacter piechaudii ATCC 43553] Length = 260 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 191/260 (73%), Positives = 223/260 (85%) Query: 1 MKLSTLLLGLMAGALLISTSVARADALDDIQKAGVLRVAVPQDFPPFGSVTADLKPQGLD 60 M TLLL L A L++ + AD LDDI KAGV+++AVPQDFPPFGSV +D+KP G D Sbjct: 1 MNRRTLLLSLCTAASLLAAPLTHADTLDDIVKAGVIKIAVPQDFPPFGSVGSDMKPLGYD 60 Query: 61 IDVASLIAKKLGVKVELIPVTSANRVPYLQTRKVDLVISSMGKNAEREKVIDFTAAYAPF 120 ID A+LIAK+LGVK+EL+PVTSANRVPYLQTRKVDLVISS+GKNAEREK IDF+ AYAPF Sbjct: 61 IDTAALIAKQLGVKLELVPVTSANRVPYLQTRKVDLVISSLGKNAEREKAIDFSDAYAPF 120 Query: 121 FNGVFGPADQKVSGPADLAGKTIGVTRGSVEDLELSKIVPASATVKRYEDNNGTISSFLS 180 FNGVFGPAD KVS ADLAGKTIGVTRG+VED+ELSKI PASAT+KRYEDNNGTI++FLS Sbjct: 121 FNGVFGPADLKVSSAADLAGKTIGVTRGAVEDIELSKIAPASATLKRYEDNNGTITAFLS 180 Query: 181 NQVQLVATGNVIAAAIIAKNPPKKPETKFLIKDSPCFIGLNKDEKKLQDKVNAVLAEIKK 240 QV ++ATGNV+AAAI+A+NPPKKPETKFLIK+SPC+IG+NKDE KL+ KVN +LA K Sbjct: 181 GQVPMIATGNVVAAAILARNPPKKPETKFLIKNSPCYIGMNKDEPKLRAKVNDILAAAKH 240 Query: 241 NGELSALTVKWLGLPLPATL 260 +G LSA++ KWLG PLP L Sbjct: 241 DGSLSAISQKWLGAPLPKDL 260 >gb|EGP46369.1| amino acid ABC transporter substrate-binding protein [Achromobacter xylosoxidans AXX-A] Length = 260 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 188/260 (72%), Positives = 221/260 (85%) Query: 1 MKLSTLLLGLMAGALLISTSVARADALDDIQKAGVLRVAVPQDFPPFGSVTADLKPQGLD 60 M TLLL L A L++ + AD LDDI KAG L+VAVPQDFPPFGSV +D+KP G D Sbjct: 1 MNRRTLLLSLCTAATLLAAPLTHADTLDDIVKAGTLKVAVPQDFPPFGSVGSDMKPLGYD 60 Query: 61 IDVASLIAKKLGVKVELIPVTSANRVPYLQTRKVDLVISSMGKNAEREKVIDFTAAYAPF 120 ID A+LIAK+LGVK+EL+PVTSANRVPYLQTRKVDLVISS+GKNAEREK IDF+ AYAPF Sbjct: 61 IDTAALIAKQLGVKLELVPVTSANRVPYLQTRKVDLVISSLGKNAEREKAIDFSDAYAPF 120 Query: 121 FNGVFGPADQKVSGPADLAGKTIGVTRGSVEDLELSKIVPASATVKRYEDNNGTISSFLS 180 FNGVFGPAD KV+ ADLAGKTIGVTRG+VED+EL+KI P +AT+KRYEDNNGTI++FLS Sbjct: 121 FNGVFGPADLKVASAADLAGKTIGVTRGAVEDIELTKIAPPTATLKRYEDNNGTITAFLS 180 Query: 181 NQVQLVATGNVIAAAIIAKNPPKKPETKFLIKDSPCFIGLNKDEKKLQDKVNAVLAEIKK 240 QV L+ATGNV+AAAI+A+NPPKKPETKFLIKDSPC+IG+NKDE KL+ KVN +LA K+ Sbjct: 181 GQVPLIATGNVVAAAILARNPPKKPETKFLIKDSPCYIGMNKDEPKLRAKVNEILANAKR 240 Query: 241 NGELSALTVKWLGLPLPATL 260 +G L+A++ KWLG LP L Sbjct: 241 DGSLAAISKKWLGADLPKDL 260