BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0605.p (225 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001101060.1| cytochrome C bihemic c4 family protein [Herm... 303 9e-81 ref|YP_001354761.1| cytochrome C [Janthinobacterium sp. Marseill... 299 2e-79 ref|YP_550255.1| putative cytochrome c [Polaromonas sp. JS666] >... 282 2e-74 ref|ZP_08275291.1| putative cytochrome c [Oxalobacteraceae bacte... 277 8e-73 ref|YP_004754065.1| cytochrome C bihemic (c4 family) [Collimonas... 277 9e-73 >ref|YP_001101060.1| cytochrome C bihemic c4 family protein [Herminiimonas arsenicoxydans] emb|CAL62939.1| Putative cytochrome c4 [Herminiimonas arsenicoxydans] Length = 238 Score = 303 bits (777), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 139/216 (64%), Positives = 167/216 (77%) Query: 9 AAAAPVHAQQLPDTIAQRVAACTACHGKEGRASSDGYYPRIAGKPEGYLYNQLTNFRDGN 68 A AA V A ++PDTIAQRVAAC CHGKEGRA SDGYYPRIAGKP GYLYNQL NFRDG Sbjct: 22 AGAANVDAGKIPDTIAQRVAACVVCHGKEGRAGSDGYYPRIAGKPAGYLYNQLINFRDGK 81 Query: 69 RQYPLMTYLLDHLSDAYLHEIAAYFSAQHPPYPAPQPVEATPAVLERGRALVMNGDSSKK 128 R YP+MT +L+++SDAYL EIA YFS QHPPYP PQP ++ PA LERGR LV +GD +K Sbjct: 82 RTYPVMTAMLENMSDAYLREIAQYFSDQHPPYPEPQPTQSNPAELERGRVLVHDGDKAKG 141 Query: 129 VPACIACHGQALTGVAPAVPGLIGLPRDYINSQFGAWRNGVRRARAPDCMAQITQRLSLE 188 +PAC+ACH +TG APA+PGL+GLPRDY+ Q GAW+ G R A APDCMA+I +++S Sbjct: 142 IPACVACHSAKMTGTAPAIPGLVGLPRDYLLGQIGAWKIGTRHAAAPDCMAEIVKKMSAT 201 Query: 189 DINAASSWLAAQTVPEGARPAAATTVKLPLPCGSVA 224 DI+A ++WL+ Q VP A PA A +LPL CG +A Sbjct: 202 DISAVTAWLSGQRVPADASPAPALKTRLPLECGKLA 237 >ref|YP_001354761.1| cytochrome C [Janthinobacterium sp. Marseille] gb|ABR90467.1| probable cytochrome C [Janthinobacterium sp. Marseille] Length = 243 Score = 299 bits (765), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 137/207 (66%), Positives = 162/207 (78%) Query: 18 QLPDTIAQRVAACTACHGKEGRASSDGYYPRIAGKPEGYLYNQLTNFRDGNRQYPLMTYL 77 ++PDTIAQRVAAC CHGKEGRA SDGYYPRIAGKP GYLYNQL NFRDG R YP+MT + Sbjct: 36 KIPDTIAQRVAACVVCHGKEGRAGSDGYYPRIAGKPAGYLYNQLINFRDGKRTYPVMTAM 95 Query: 78 LDHLSDAYLHEIAAYFSAQHPPYPAPQPVEATPAVLERGRALVMNGDSSKKVPACIACHG 137 L+++SDAYL EIA YFS QHPPYP PQ ++ PA LERGR LV +GD +K +PAC+ACH Sbjct: 96 LENMSDAYLREIAQYFSEQHPPYPEPQAAQSNPAELERGRRLVHDGDKAKGIPACVACHS 155 Query: 138 QALTGVAPAVPGLIGLPRDYINSQFGAWRNGVRRARAPDCMAQITQRLSLEDINAASSWL 197 +TG APA+PGLIGLPRDY+ Q GAW+ G R A PDCMA I +++S EDI+AA++WL Sbjct: 156 AKMTGTAPAIPGLIGLPRDYLLGQIGAWKIGTRHAAQPDCMADIVKKMSAEDISAAAAWL 215 Query: 198 AAQTVPEGARPAAATTVKLPLPCGSVA 224 + Q VP A PA A T KLPL CG +A Sbjct: 216 SEQRVPADASPAPAITAKLPLECGKLA 242 >ref|YP_550255.1| putative cytochrome c [Polaromonas sp. JS666] gb|ABE45357.1| putative cytochrome c [Polaromonas sp. JS666] Length = 257 Score = 282 bits (722), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 141/224 (62%), Positives = 164/224 (73%), Gaps = 4/224 (1%) Query: 6 LWIAAAAPVHAQQLPDTIAQRVAACTACHGKEGRASSDGYYPRIAGKPEGYLYNQLTNFR 65 +W AA + A DTIAQR ACTACHG +GRA+ DGYYPR+AGKP GYLYNQL NFR Sbjct: 21 VWAAAGPALAAAPFEDTIAQRTLACTACHGPQGRAAPDGYYPRLAGKPAGYLYNQLLNFR 80 Query: 66 DGNRQYPLMTYLLDHLSDAYLHEIAAYFSAQHPPYPAPQPVEATPAVLERGRALVMNGDS 125 DG R Y LMT LLD LSDAYL EIA YFS PYPAP P +A+ VL G LVM GD+ Sbjct: 81 DGRRHYGLMTQLLDPLSDAYLMEIAQYFSTLDVPYPAPLPTKASVEVLRHGERLVMQGDA 140 Query: 126 SKKVPACIACHGQALTGVAPAVPGLIGLPRDYINSQFGAWRNGVRRARAPDCMAQITQRL 185 +++VPAC+ CHGQA+TGVAP VPGL+GLPRDY+N+Q GAW+ G RRA APDCM + RL Sbjct: 141 ARQVPACVQCHGQAMTGVAPNVPGLLGLPRDYLNAQLGAWKAGQRRAHAPDCMKDVVARL 200 Query: 186 SLEDINAASSWLAAQTVPEGARPAAATTV----KLPLPCGSVAQ 225 SLEDINAASSWLAAQ +P ++PA+A P+ CGS Q Sbjct: 201 SLEDINAASSWLAAQPLPASSKPASALPALAPGARPIDCGSAPQ 244 >ref|ZP_08275291.1| putative cytochrome c [Oxalobacteraceae bacterium IMCC9480] gb|EGF31239.1| putative cytochrome c [Oxalobacteraceae bacterium IMCC9480] Length = 220 Score = 277 bits (709), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 133/217 (61%), Positives = 163/217 (75%), Gaps = 4/217 (1%) Query: 9 AAAAPVHAQQLPDTIAQRVAACTACHGKEGRASSDGYYPRIAGKPEGYLYNQLTNFRDGN 68 A AAPV L D+IAQR AAC ACH +G+ +DGYYPRIAGKP GYL NQL NFR+G Sbjct: 8 AFAAPV----LEDSIAQRAAACIACHNIDGKRGADGYYPRIAGKPAGYLANQLINFREGR 63 Query: 69 RQYPLMTYLLDHLSDAYLHEIAAYFSAQHPPYPAPQPVEATPAVLERGRALVMNGDSSKK 128 R YP M Y++D+LSDAYLHE+A YFSA PYP PQ + +V RG+ LV +GD++K Sbjct: 64 RAYPQMIYMVDNLSDAYLHELAGYFSALEVPYPPPQALAVPASVAARGQLLVQHGDAAKN 123 Query: 129 VPACIACHGQALTGVAPAVPGLIGLPRDYINSQFGAWRNGVRRARAPDCMAQITQRLSLE 188 +PACIACHG ALTGV+PA+PGL+GLPRDY+ +QFGAWRNG R A APDCM +I +LS + Sbjct: 124 IPACIACHGSALTGVSPAIPGLLGLPRDYLAAQFGAWRNGTRHAAAPDCMHKIATQLSTD 183 Query: 189 DINAASSWLAAQTVPEGARPAAATTVKLPLPCGSVAQ 225 DI A ++WL+AQ VP GA+PA + +PL CGSV Q Sbjct: 184 DIGAVAAWLSAQPVPAGAKPATSLPAAMPLTCGSVPQ 220 >ref|YP_004754065.1| cytochrome C bihemic (c4 family) [Collimonas fungivorans Ter331] gb|AEK63242.1| cytochrome C bihemic (c4 family) [Collimonas fungivorans Ter331] Length = 272 Score = 277 bits (708), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 146/216 (67%), Positives = 168/216 (77%) Query: 8 IAAAAPVHAQQLPDTIAQRVAACTACHGKEGRASSDGYYPRIAGKPEGYLYNQLTNFRDG 67 + AA A +PDTI QR+AACTACHG++GRA++DGYYPRIAGKP GYLYNQL NFR+G Sbjct: 50 LVTAADADAGPVPDTIKQRLAACTACHGEQGRATNDGYYPRIAGKPAGYLYNQLHNFREG 109 Query: 68 NRQYPLMTYLLDHLSDAYLHEIAAYFSAQHPPYPAPQPVEATPAVLERGRALVMNGDSSK 127 RQYP+MTYL+DHLSDAYL EIA YF+ QHPPYP PQP + + A RG LV GDS+K Sbjct: 110 RRQYPMMTYLVDHLSDAYLQEIAQYFADQHPPYPPPQPPDPSSATRARGEILVNRGDSAK 169 Query: 128 KVPACIACHGQALTGVAPAVPGLIGLPRDYINSQFGAWRNGVRRARAPDCMAQITQRLSL 187 K+PACIACHG A+TGV P PGL+GLPRDY+ Q GAW+ G R A APDCMAQ+ QRLS Sbjct: 170 KIPACIACHGSAMTGVLPTTPGLLGLPRDYLVGQIGAWKTGARHAVAPDCMAQVVQRLSA 229 Query: 188 EDINAASSWLAAQTVPEGARPAAATTVKLPLPCGSV 223 EDI A +SWLAAQ VP A AA TT KLPL CGS+ Sbjct: 230 EDIGAVASWLAAQPVPADATAAAPTTAKLPLACGSI 265