BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0594.p         (127 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001353934.1| GlcG protein [Janthinobacterium sp. Marseill...   194   4e-48
ref|YP_003774801.1| glycolate/propanediol utilization protein [H...   192   1e-47
ref|YP_001099468.1| hypothetical protein HEAR1163 [Herminiimonas...   180   8e-44
ref|YP_001791854.1| hypothetical protein Lcho_2824 [Leptothrix c...   177   3e-43
ref|YP_004753154.1| hypothetical protein CFU_2504 [Collimonas fu...   177   6e-43

>ref|YP_001353934.1| GlcG protein [Janthinobacterium sp. Marseille]
 gb|ABR88715.1| GlcG protein [Janthinobacterium sp. Marseille]
          Length = 135

 Score =  194 bits (493), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 97/134 (72%), Positives = 111/134 (82%), Gaps = 8/134 (5%)

Query: 1   MQTKPYLTLDDLKKIAAGAEAEAKANNWAVVIAIVD--------XRLDGAAPASSHIAPA 52
           MQTK  LTL+D+KKIAA AE EA  + W V IAIVD         RLDGAAP SSHIAPA
Sbjct: 1   MQTKQVLTLEDVKKIAAAAETEANLHKWCVTIAIVDDGGHLLWLQRLDGAAPISSHIAPA 60

Query: 53  KAKTAALGRRETKIYEDMINNGRFSFLCAPELDGLLEGGVPIVVDGQCVGAVGVSGVKSS 112
           KAKTAALGRRE+K+YED+INNGRFSF+ AP L+G+LEGGVPIV++GQC+GAVGVSGVKS+
Sbjct: 61  KAKTAALGRRESKVYEDIINNGRFSFITAPTLEGMLEGGVPIVINGQCLGAVGVSGVKST 120

Query: 113 EDVQIGKAGIAALG 126
           EDVQI KAGI A+G
Sbjct: 121 EDVQIAKAGIIAIG 134


>ref|YP_003774801.1| glycolate/propanediol utilization protein [Herbaspirillum
           seropedicae SmR1]
 emb|CAM32543.1| Glycolate/propanediol utilization protein [Herbaspirillum
           seropedicae]
 gb|ADJ62893.1| glycolate/propanediol utilization protein [Herbaspirillum
           seropedicae SmR1]
          Length = 135

 Score =  192 bits (488), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/135 (80%), Positives = 117/135 (86%), Gaps = 8/135 (5%)

Query: 1   MQTKPYLTLDDLKKIAAGAEAEAKANNWAVVIAIVD--------XRLDGAAPASSHIAPA 52
           MQTKP+LTLDD+KKIAAGAEAEA+ANNW VVI++VD         R+DGAAP SS IAPA
Sbjct: 1   MQTKPFLTLDDVKKIAAGAEAEARANNWNVVISVVDDGGHLLWLQRMDGAAPISSQIAPA 60

Query: 53  KAKTAALGRRETKIYEDMINNGRFSFLCAPELDGLLEGGVPIVVDGQCVGAVGVSGVKSS 112
           KA+TAALGRRE+KIYEDMINNGR SFL AP LDGLLEGGVP+VVDG  VGAVGVSGVKSS
Sbjct: 61  KARTAALGRRESKIYEDMINNGRVSFLSAPGLDGLLEGGVPVVVDGHYVGAVGVSGVKSS 120

Query: 113 EDVQIGKAGIAALGL 127
           EDVQI KAGIAALGL
Sbjct: 121 EDVQIAKAGIAALGL 135


>ref|YP_001099468.1| hypothetical protein HEAR1163 [Herminiimonas arsenicoxydans]
 emb|CAL61341.1| conserved hypothetical protein, putative GlcG protein
           [Herminiimonas arsenicoxydans]
          Length = 135

 Score =  180 bits (456), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 93/134 (69%), Positives = 111/134 (82%), Gaps = 8/134 (5%)

Query: 1   MQTKPYLTLDDLKKIAAGAEAEAKANNWAVVIAIVD--------XRLDGAAPASSHIAPA 52
           MQ+K  LTL+D+KKIAA AE EA  N W V IAIVD         R+DGAAP SSHIAPA
Sbjct: 1   MQSKQILTLEDVKKIAAAAETEATLNKWNVTIAIVDDGGHLLWLQRMDGAAPISSHIAPA 60

Query: 53  KAKTAALGRRETKIYEDMINNGRFSFLCAPELDGLLEGGVPIVVDGQCVGAVGVSGVKSS 112
           KAKTAALGRRE+K+YED+INNGRFSF+ AP L+G+LEGGVP++++GQC+GAVGVSGVKS+
Sbjct: 61  KAKTAALGRRESKVYEDIINNGRFSFMTAPTLEGMLEGGVPVIINGQCLGAVGVSGVKST 120

Query: 113 EDVQIGKAGIAALG 126
           EDVQI KAG+ A+G
Sbjct: 121 EDVQIAKAGLIAIG 134


>ref|YP_001791854.1| hypothetical protein Lcho_2824 [Leptothrix cholodnii SP-6]
 gb|ACB35089.1| protein of unknown function DUF336 [Leptothrix cholodnii SP-6]
          Length = 135

 Score =  177 bits (450), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 95/134 (70%), Positives = 112/134 (83%), Gaps = 8/134 (5%)

Query: 1   MQTKPYLTLDDLKKIAAGAEAEAKANNWAVVIAIVD--------XRLDGAAPASSHIAPA 52
           M+TKP LTL+D++++AA AEAEA  NNWAV IAIVD         RLDGAA  S+HIAPA
Sbjct: 1   MKTKPVLTLEDVRRMAAAAEAEALNNNWAVTIAIVDDGGHLLWLQRLDGAAALSAHIAPA 60

Query: 53  KAKTAALGRRETKIYEDMINNGRFSFLCAPELDGLLEGGVPIVVDGQCVGAVGVSGVKSS 112
           KA+T+ALGRRE++IYE+MIN GR SFL APE+DGLLEGGVPI+VDG+C+GAVGVSGVKS 
Sbjct: 61  KARTSALGRRESRIYEEMINQGRTSFLSAPEIDGLLEGGVPIMVDGECIGAVGVSGVKSV 120

Query: 113 EDVQIGKAGIAALG 126
           ED Q+ KAGIAALG
Sbjct: 121 EDAQVAKAGIAALG 134


>ref|YP_004753154.1| hypothetical protein CFU_2504 [Collimonas fungivorans Ter331]
 gb|AEK62331.1| hypothetical protein CFU_2504 [Collimonas fungivorans Ter331]
          Length = 151

 Score =  177 bits (448), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 97/135 (71%), Positives = 112/135 (82%), Gaps = 8/135 (5%)

Query: 1   MQTKPYLTLDDLKKIAAGAEAEAKANNWAVVIAIVD--------XRLDGAAPASSHIAPA 52
           M++K  LTLDD+KKIAA AEAEA  N+WAV I+IVD         R+DG AP S+HI+PA
Sbjct: 17  MKSKQVLTLDDVKKIAAAAEAEAVKNHWAVTISIVDEGGHLLWLQRMDGCAPISAHISPA 76

Query: 53  KAKTAALGRRETKIYEDMINNGRFSFLCAPELDGLLEGGVPIVVDGQCVGAVGVSGVKSS 112
           KAKTAALG+RE+KIYEDMINNGRFSF+ AP L+GLLEGGVPIVV G+ +GAVGVSGVKSS
Sbjct: 77  KAKTAALGQRESKIYEDMINNGRFSFITAPNLEGLLEGGVPIVVGGEYLGAVGVSGVKSS 136

Query: 113 EDVQIGKAGIAALGL 127
           EDVQI KAGIAAL +
Sbjct: 137 EDVQIAKAGIAALSV 151