BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0588.p (320 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001352850.1| Fe2+-dicitrate sensor, membrane component [J... 248 1e-63 ref|NP_840225.1| transmembrane sensor [Nitrosomonas europaea ATC... 229 6e-58 ref|YP_001352445.1| Fe2+-dicitrate sensor, membrane component [J... 227 2e-57 ref|YP_001355186.1| Fe2+-dicitrate sensor, membrane component [J... 225 9e-57 ref|YP_003978576.1| FecR family protein [Achromobacter xylosoxid... 222 6e-56 >ref|YP_001352850.1| Fe2+-dicitrate sensor, membrane component [Janthinobacterium sp. Marseille] gb|ABR89798.1| Fe2+-dicitrate sensor, membrane component [Janthinobacterium sp. Marseille] Length = 330 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 146/323 (45%), Positives = 189/323 (58%), Gaps = 26/323 (8%) Query: 1 VTIAIDWMVKLQSGAATEQEREACRRWRAEEARHELAWQRLQSLSERV----STLPSALT 56 V AI W+V LQSG A+ + AC WRA ++RHE AWQRL L + + L S L Sbjct: 17 VKQAIVWLVTLQSGGASPTDERACEAWRAADSRHEQAWQRLHGLGQDFRASSNVLASPLL 76 Query: 57 HGSIGDASNRHRHNRRFAVKSLCIALGVGLLAAGGNEIV-----PWRTLMADYATKAGER 111 + N R+NRR +KSL GL GG V W++ MA++ T GE+ Sbjct: 77 RSVL---RNSERNNRRIVLKSL-----FGLALIGGTATVVRKQPAWQSAMAEHQTATGEQ 128 Query: 112 RRVTLADGTAVELNTATAIDAAYDEQSRLVRLHRGEVLITTAKEIDRAYRPFVVHTRLGQ 171 RR+ LADGT + LNTATAID +D+Q RLV LHRGE+LI TA+ D A RPF + T G Sbjct: 129 RRIVLADGTRILLNTATAIDVHFDDQLRLVILHRGEILIETAQ--DEAGRPFELATSNGT 186 Query: 172 ARALGTRFQVR--DSVAGMRIAVFEGTVEFKPAGTSGTNGAIRIDAGRQGLFDRQGLIGT 229 R +GTRF VR D + +AV EG V P G ++RI+AG Q F + Sbjct: 187 IRPIGTRFTVRHSDRPSSTAVAVLEGAVRVTP----GQGNSVRINAGEQTHFTELAALAP 242 Query: 230 LSQANEETVAWTDGVIVADRMPLGELVAELDRSMPGKLRCDPAIASLTISGVFPLDQPAR 289 + ++ AWTDGV+V +RM L + V ELDR PG LRCDPA+A L +SG FPL P Sbjct: 243 FA-LDDSAAAWTDGVLVVERMRLADFVTELDRYRPGVLRCDPAVADLLVSGSFPLRDPDA 301 Query: 290 ILAAIARTLPVQIDTVTSYWITL 312 +LA +A TLP+Q+ T+T YW T+ Sbjct: 302 VLALLAETLPLQVRTLTRYWATV 324 >ref|NP_840225.1| transmembrane sensor [Nitrosomonas europaea ATCC 19718] emb|CAD84038.1| putative transmembrane sensor [Nitrosomonas europaea ATCC 19718] Length = 349 Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 125/313 (39%), Positives = 181/313 (57%), Gaps = 6/313 (1%) Query: 4 AIDWMVKLQSGAATEQEREACRRWRAEEARHELAWQRLQSLSERVSTLPSALTHGSIGDA 63 A++W+V+LQ+ E EA +RW A H+LAWQ +++++ R + L S L ++ A Sbjct: 39 AVEWLVELQAADHDEATHEAFQRWLAAHPDHKLAWQHIETVNTRFNGLTSPLG-SAVAKA 97 Query: 64 --SNRHRHNRRFAVKSLCIALGVGLLAAGGNEIVPWRTLMADYATKAGERRRVTLADGTA 121 + R RR +K+L + L G +E +PWR AD T G+RR +TLADG+ Sbjct: 98 VLTPRRSLKRRQIIKTLVVILFAGSTGWWADEKIPWRAWTADERTHIGQRRNITLADGSR 157 Query: 122 VELNTATAIDAAYDEQSRLVRLHRGEVLITTAKEIDRAYRPFVVHTRLGQARALGTRFQV 181 V LNT TAI+ + R ++L RGE+L+TT ++ RPF+V + R LGTRF + Sbjct: 158 VVLNTDTAINIRFTANERRLQLVRGEILVTTNQDSASIVRPFIVEIAQSELRPLGTRFTI 217 Query: 182 RDSVAGMRIAVFEGTVEFKPAGTSGTNGAIRIDAGRQGLFDRQGLIGTLSQANEETVAWT 241 R++VFEG VE + N + AG Q F QG I + A++ + AW+ Sbjct: 218 HQQTTSNRLSVFEGAVEIR--LRQDINYRHIVQAGEQVDFSNQG-IHEIHPADDTSTAWS 274 Query: 242 DGVIVADRMPLGELVAELDRSMPGKLRCDPAIASLTISGVFPLDQPARILAAIARTLPVQ 301 +G+I+A M L + +AELDR PGKL CDPA+A L +SG +PL P IL A+ TLPV+ Sbjct: 275 NGMIIASSMRLADFLAELDRHRPGKLNCDPAVADLRVSGTYPLTDPEDILDALQTTLPVK 334 Query: 302 IDTVTSYWITLRP 314 I T YW+T+RP Sbjct: 335 IQYFTRYWVTVRP 347 >ref|YP_001352445.1| Fe2+-dicitrate sensor, membrane component [Janthinobacterium sp. Marseille] gb|ABR89411.1| Fe2+-dicitrate sensor, membrane component [Janthinobacterium sp. Marseille] Length = 334 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 129/315 (40%), Positives = 187/315 (59%), Gaps = 10/315 (3%) Query: 4 AIDWMVKLQSGAATEQEREACRRWRAEEARHELAWQRLQSLSE----RVSTLPSALTHGS 59 A++W+V L SG+A R A ++WRA + HE AW ++ +++ R++ + + S Sbjct: 17 AVEWLVHLWSGSADLDSRAAWQKWRAADPEHERAWLHIEDVNQQLRGRMNGVSADTAIAS 76 Query: 60 IGDASNRHRHNRRFAVKSLCIALGVGLLAAGGNEIVPWRTLMADYATKAGERRRVTLADG 119 I ++R +RR A+K+ + + VG A +E + W+TL ++ T GER LADG Sbjct: 77 IAQPASR---SRRKALKTFSVVVTVGTAAWLSSETMLWKTLTSEIRTATGERLNFKLADG 133 Query: 120 TAVELNTATAIDAAYDEQSRLVRLHRGEVLITTAKEIDRAYRPFVVHTRLGQARALGTRF 179 T +ELNT TA++ YD RLV+L RGE+LITTAK+ RPF+ T G+ ALGT+F Sbjct: 134 TQLELNTDTAVNVRYDSALRLVQLVRGELLITTAKDSVSPARPFMAETVAGRILALGTKF 193 Query: 180 QVRDSVAGMRIAVFEGTVEFKPAGTSGTNGAIRIDAGRQGLFDRQGLIGTLSQANEETVA 239 VR ++AV EG VE PA G +R+DAG+ G F+ +G + T QA A Sbjct: 194 TVRQDGDISQVAVLEGAVELIPANNPGQ--VVRLDAGQAGSFNAEGAL-TPPQAISAQAA 250 Query: 240 WTDGVIVADRMPLGELVAELDRSMPGKLRCDPAIASLTISGVFPLDQPARILAAIARTLP 299 WT+GV++A M L + +AEL R PG L CDPA A L +SGVFPL+ +IL ++ LP Sbjct: 251 WTEGVLIASDMRLDDFIAELKRYRPGHLSCDPASAGLRLSGVFPLNDMQKILTSLTEVLP 310 Query: 300 VQIDTVTSYWITLRP 314 V++ T T YW + P Sbjct: 311 VRVQTFTRYWTRIVP 325 >ref|YP_001355186.1| Fe2+-dicitrate sensor, membrane component [Janthinobacterium sp. Marseille] gb|ABR89497.1| Fe2+-dicitrate sensor, membrane component [Janthinobacterium sp. Marseille] Length = 340 Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 128/314 (40%), Positives = 177/314 (56%), Gaps = 10/314 (3%) Query: 4 AIDWMVKLQSGAATEQEREACRRWRAEEARHELAWQRLQSLSERVSTLPSALTHGSIGDA 63 A W+ L G +E++ AC+RWRA + HE AWQR Q ++++ +P A+ ++G Sbjct: 29 AAQWLASLYDGQ-SEEDIAACKRWRAADPEHERAWQRAQRINQKFGIVPKAVGLPALG-- 85 Query: 64 SNRHRHNRRFAVKSLCIALGVGLLAAGGNEIVPWRTLMADYATKAGERRRVTLADGTAVE 123 + R +RR A+K+L + + + PW + ADY T GE R + LADGT V Sbjct: 86 -RKVRVDRRRAIKTLLVLMMAAPVGYVSYRYAPWVAMTADYRTAKGEHREIQLADGTRVH 144 Query: 124 LNTATAIDAAYDEQSRLVRLHRGEVLITTAKEIDR-AYRPFVVHTRLGQARALGTRFQVR 182 L TAT+ID +D RL+RLH GE+ + T + AYRPF+V T G RALGTRF VR Sbjct: 145 LGTATSIDIEFDGAQRLLRLHAGEIEVRTGSDSGHPAYRPFIVKTTHGYIRALGTRFVVR 204 Query: 183 --DSVAGMRIAVFEGTVEFKPAGTSGTNGAIRIDAGRQGLFDRQGLIGTLSQANEETVAW 240 + R++V E VE +P SG I ++AG+Q F+ G + + W Sbjct: 205 RDEGATTTRVSVLEHAVEIRPQAASGK--LIVLNAGQQTRFNESGF-EQVEALDPHVADW 261 Query: 241 TDGVIVADRMPLGELVAELDRSMPGKLRCDPAIASLTISGVFPLDQPARILAAIARTLPV 300 T GV+ A RM L E AEL+R PG LRCDPA+A L I+G F LD IL A+ TLPV Sbjct: 262 TSGVLFASRMRLDEFAAELNRYRPGLLRCDPAVAGLRITGAFQLDNTDNILNALPDTLPV 321 Query: 301 QIDTVTSYWITLRP 314 ++ T YW+T+ P Sbjct: 322 EVLFRTRYWVTIVP 335 >ref|YP_003978576.1| FecR family protein [Achromobacter xylosoxidans A8] gb|ADP15861.1| FecR family protein 9 [Achromobacter xylosoxidans A8] Length = 341 Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 127/315 (40%), Positives = 186/315 (59%), Gaps = 7/315 (2%) Query: 4 AIDWMVKLQSGAATEQEREACRRWRAEEARHELAWQRLQSLSERVSTLPSALTHGSIGDA 63 A++W+V LQ+ A++ AC+RWRAE HE AW+ ++S +++ L + L G++ Sbjct: 29 AVEWLVALQAADASDSTHAACQRWRAEHPDHERAWRHIESFGQQLRGLNTPLVRGTLTH- 87 Query: 64 SNRHRHNRRFAVKSLCIAL--GVGLLAAGGNEIVPWRTLMADYATKAGERRRVTLADGTA 121 +R+ RR A+K+L +AL G G A + W+ +D+ T AG+R VTLAD + Sbjct: 88 EDRNGRTRRRAIKTLALALFAGGGAWLARDSLWRGWQDWQSDHHTDAGQRLGVTLADASR 147 Query: 122 VELNTATAIDAAYDEQSRLVRLHRGEVLITTAKEIDRAY-RPFVVHTRLGQARALGTRFQ 180 ++L+TA+AID +D RLVRL RG +L+TTA + RPF+V T G+ RALGTR+ Sbjct: 148 IDLDTASAIDVRFDSAQRLVRLLRGRILVTTAPDPASPIGRPFLVETAQGRVRALGTRYS 207 Query: 181 VRDSVAGMRIAVFEGTVEFKPAGTSGTNGAIRIDAGRQGLFDRQGLIGTLSQANEETVAW 240 VR +AVFEGTVE +P TN I A Q F R + A +W Sbjct: 208 VRQFPDRSHVAVFEGTVEIRP--DLHTNAPRLIHASEQASFTRDA-VDQPRPAEPRDASW 264 Query: 241 TDGVIVADRMPLGELVAELDRSMPGKLRCDPAIASLTISGVFPLDQPARILAAIARTLPV 300 + G++VA MPL + + EL R +PG+L C P + L +SG++PLD R+L + RT PV Sbjct: 265 SVGMLVAQDMPLSDFIEELARYVPGRLACAPDASHLKVSGIYPLDNADRVLDMLRRTHPV 324 Query: 301 QIDTVTSYWITLRPR 315 ++D +T YWIT+R R Sbjct: 325 EVDRMTRYWITVRLR 339