BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0584.p (222 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_882722.1| putative short chain dehydrogenase [Bordetella ... 197 7e-49 ref|YP_003982662.1| short chain dehydrogenase family protein 65 ... 196 2e-48 ref|YP_001890134.1| short-chain dehydrogenase/reductase SDR [Bur... 196 2e-48 ref|YP_001629768.1| short-chain dehydrogenase [Bordetella petrii... 193 1e-47 ref|YP_371979.1| Short-chain dehydrogenase/reductase SDR [Burkho... 187 9e-46 >ref|NP_882722.1| putative short chain dehydrogenase [Bordetella parapertussis 12822] ref|NP_886920.1| short chain dehydrogenase [Bordetella bronchiseptica RB50] emb|CAE35952.1| putative short chain dehydrogenase [Bordetella parapertussis] emb|CAE30869.1| putative short chain dehydrogenase [Bordetella bronchiseptica RB50] Length = 253 Score = 197 bits (502), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 110/202 (54%), Positives = 136/202 (67%), Gaps = 12/202 (5%) Query: 1 LITGGANGIGKAAALSFVREGARVIIADIDKEAAQRVQETAAQIVRDANGEIRGG--ALA 58 ITGG GIG+A+AL F REGARV+IA+ D +A ++ E A +GG AL Sbjct: 10 FITGGGAGIGRASALLFAREGARVVIAERDADAGRQTVELIAG---------QGGPRALF 60 Query: 59 VHCDVTDEASVRSAVETAVAHYGKLDVLYNNAGGSTTRDGTVTEAPVDEFWRAIRLDLFG 118 V DVT+ SV AV VA YG+ DVLYNNAGGST RD VT+ PV+EFW ++LDLFG Sbjct: 61 VPTDVTEADSVEQAVARTVAEYGRFDVLYNNAGGSTVRDSRVTDTPVEEFWAKMKLDLFG 120 Query: 119 TFLCCKIALPELIKAG-GGIVINTTSIAAIKAFPGHDCYTAAKGGVSALTRSMAVEYAAH 177 T+L C+ + +I AG GG VIN+TSI A+ G D YTAAKG VSALTRSMAVEYA H Sbjct: 121 TWLGCRYGIQAMIDAGHGGAVINSTSIFALIGTHGKDAYTAAKGAVSALTRSMAVEYAQH 180 Query: 178 KIRVNALAPAVTLSRRKSRIWR 199 +IRVNA+AP T + R ++ + Sbjct: 181 RIRVNAVAPGATATERVLKLLQ 202 >ref|YP_003982662.1| short chain dehydrogenase family protein 65 [Achromobacter xylosoxidans A8] gb|ADP19947.1| short chain dehydrogenase family protein 65 [Achromobacter xylosoxidans A8] Length = 253 Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 105/200 (52%), Positives = 137/200 (68%), Gaps = 8/200 (4%) Query: 1 LITGGANGIGKAAALSFVREGARVIIADIDKEAAQRVQETAAQIVRDANGEIRGGALAVH 60 ITGG GIG+A+AL F +EGA+V+IA+ D A E A +V + G AL +H Sbjct: 10 FITGGGAGIGRASALLFAKEGAQVVIAERDTAAG----EQTAAMVEASTGRP---ALFIH 62 Query: 61 CDVTDEASVRSAVETAVAHYGKLDVLYNNAGGSTTRDGTVTEAPVDEFWRAIRLDLFGTF 120 DVT+ S+ AV+ VA +G+ DVLYNNAGGST RD VT+APV+EFW ++LDLFGT+ Sbjct: 63 TDVTEPESLEEAVKRTVAQFGRFDVLYNNAGGSTVRDSRVTDAPVEEFWSKMKLDLFGTW 122 Query: 121 LCCKIALPELIKAG-GGIVINTTSIAAIKAFPGHDCYTAAKGGVSALTRSMAVEYAAHKI 179 L C+ + ++ AG GG VIN+TSI A+ G D YTAAKG VSALTRSMAVEYA ++I Sbjct: 123 LGCRYGIQAMMDAGNGGSVINSTSIFALIGTHGKDAYTAAKGAVSALTRSMAVEYAQYRI 182 Query: 180 RVNALAPAVTLSRRKSRIWR 199 RVNA+AP T + R ++ + Sbjct: 183 RVNAVAPGATATERVLKLLK 202 >ref|YP_001890134.1| short-chain dehydrogenase/reductase SDR [Burkholderia phytofirmans PsJN] gb|ACD20763.1| short-chain dehydrogenase/reductase SDR [Burkholderia phytofirmans PsJN] Length = 251 Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 104/182 (57%), Positives = 126/182 (69%), Gaps = 10/182 (5%) Query: 17 FVREGARVIIADIDKEAAQRVQETAAQIVRDANGEIRGG-ALAVHCDVTDEASVRSAVET 75 F REG +V I D D + A+R E Q GG A A DVT E SVR+A+ Sbjct: 26 FAREGCQVAIGDRDFDEARRTVEAIKQ---------EGGRAAAFPLDVTQEDSVRAAIGD 76 Query: 76 AVAHYGKLDVLYNNAGGSTTRDGTVTEAPVDEFWRAIRLDLFGTFLCCKIALPELIKAGG 135 AV +G LDVLYNN GGS+T+D +VTEAP++EFWR I +DLFGT+L C+ +PELIK GG Sbjct: 77 AVEAFGGLDVLYNNVGGSSTKDASVTEAPLEEFWRCINVDLFGTWLGCRHGIPELIKRGG 136 Query: 136 GIVINTTSIAAIKAFPGHDCYTAAKGGVSALTRSMAVEYAAHKIRVNALAPAVTLSRRKS 195 G VINT+SI A+ P D YTAAKG VSALTRSMAVEYA+HKIRVNA+AP +T + R Sbjct: 137 GSVINTSSILALMGSPNKDAYTAAKGAVSALTRSMAVEYASHKIRVNAIAPGITRTPRVE 196 Query: 196 RI 197 R+ Sbjct: 197 RL 198 >ref|YP_001629768.1| short-chain dehydrogenase [Bordetella petrii DSM 12804] emb|CAP41498.1| probable short-chain dehydrogenase [Bordetella petrii] Length = 253 Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 106/200 (53%), Positives = 136/200 (68%), Gaps = 8/200 (4%) Query: 1 LITGGANGIGKAAALSFVREGARVIIADIDKEAAQRVQETAAQIVRDANGEIRGGALAVH 60 ITGG GIG A+AL F +EGA+V+IA+ D A E A IV + G A +H Sbjct: 10 FITGGGAGIGCASALLFAQEGAQVVIAERDTAAG----EQTAAIVEKSTGRP---ARFIH 62 Query: 61 CDVTDEASVRSAVETAVAHYGKLDVLYNNAGGSTTRDGTVTEAPVDEFWRAIRLDLFGTF 120 DVT+ S+ +AV+ VA +G+ DVLYNNAGGST RD VT+APVDEFW ++LDLFGT+ Sbjct: 63 TDVTEPESLEAAVKRTVAEFGRFDVLYNNAGGSTVRDSRVTDAPVDEFWSKMKLDLFGTW 122 Query: 121 LCCKIALPELIKAG-GGIVINTTSIAAIKAFPGHDCYTAAKGGVSALTRSMAVEYAAHKI 179 L C+ + ++ AG GG VIN+TSI A+ G D YTAAKG VSALTRSMAVEYA ++I Sbjct: 123 LGCRYGIQAMMDAGNGGSVINSTSIFALIGTHGKDAYTAAKGAVSALTRSMAVEYAQYRI 182 Query: 180 RVNALAPAVTLSRRKSRIWR 199 RVNA+AP T + R ++ + Sbjct: 183 RVNAVAPGATATERVLKLLK 202 >ref|YP_371979.1| Short-chain dehydrogenase/reductase SDR [Burkholderia sp. 383] gb|ABB11335.1| Short-chain dehydrogenase/reductase SDR [Burkholderia sp. 383] Length = 256 Score = 187 bits (475), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 97/191 (50%), Positives = 130/191 (68%), Gaps = 8/191 (4%) Query: 17 FVREGARVIIADIDKEAAQRVQETAAQIVRDANGEIRGGALAVHCDVTDEASVRSAVETA 76 F EGA V++A+ D ++ Q + +R A G A V DVT E SVR A+ TA Sbjct: 30 FASEGATVVVAEFDPQSGQATVDA----IRAAGGT----ATFVRTDVTSEDSVRDAIATA 81 Query: 77 VAHYGKLDVLYNNAGGSTTRDGTVTEAPVDEFWRAIRLDLFGTFLCCKIALPELIKAGGG 136 + G++DVLYNNAGGST+ D VT+ P DEFWRAI+LDLFGT++ CK + ++K GGG Sbjct: 82 LEFAGRIDVLYNNAGGSTSVDAQVTDCPADEFWRAIKLDLFGTWITCKYGIAAMLKTGGG 141 Query: 137 IVINTTSIAAIKAFPGHDCYTAAKGGVSALTRSMAVEYAAHKIRVNALAPAVTLSRRKSR 196 VIN++S+ A+ G D YTAAKGG+SA+TRSMAVEYA H+IRVNA+APAVT++ R + Sbjct: 142 SVINSSSVFALVGTRGKDAYTAAKGGISAITRSMAVEYAPHRIRVNAVAPAVTVTARVAG 201 Query: 197 IWRSILPATNR 207 + +S N+ Sbjct: 202 LLKSQPDVINK 212