BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0582.p (260 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_367282.1| branched chain amino acid ABC transporter ATPas... 325 3e-87 ref|YP_003982664.1| high-affinity branched-chain amino acid tran... 325 5e-87 ref|YP_001629770.1| high-affinity branched-chain amino acid tran... 323 2e-86 ref|NP_882720.1| ABC transport system ATP-binding protein [Borde... 320 2e-85 ref|YP_004127585.1| abc transporter related protein [Alicycliphi... 277 9e-73 >ref|YP_367282.1| branched chain amino acid ABC transporter ATPase [Burkholderia sp. 383] gb|ABB06638.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family [Burkholderia sp. 383] Length = 250 Score = 325 bits (834), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 164/239 (68%), Positives = 189/239 (79%) Query: 22 RVTNLTRRFGGLVAVSDLNMEIRRQEILGLIGPNGAGKSTTFNLISGFFKPSSGRLYFDG 81 R L+RRFGGL+AVSDL++EIR +EILGLIGPNGAGKSTTFNL+SGF PS GRL G Sbjct: 12 RAEGLSRRFGGLLAVSDLSLEIREREILGLIGPNGAGKSTTFNLLSGFLVPSGGRLEIGG 71 Query: 82 KDMTGKSALEISRAGLVRTFQHGSLMRSMSVYENILIGAIGALPRGTKKERAARVEETAE 141 DMTG+S ISR GLVRTFQHGSLMR+M+V +NILIGAIG + + +ERA RV ETAE Sbjct: 72 HDMTGRSPETISRHGLVRTFQHGSLMRTMTVEDNILIGAIGGMRGTSHRERARRVRETAE 131 Query: 142 MLGLGPYLNEIAGTLPHGIQRLISIAIASAPRPKLLCLDEPLTGLNQTEVMTTLGVFEKI 201 ++GL L + AG LPHG+QRL+SIAIA APRP+LLCLDEPLTGLNQTEV L F I Sbjct: 132 LVGLQQVLGDTAGDLPHGLQRLVSIAIAFAPRPRLLCLDEPLTGLNQTEVAAVLETFRTI 191 Query: 202 RQVFGCTILLVEHNMKAVMQICDRIVVLHHGQLLATGTPDEIRHDDTVVSAYLGKRHGD 260 R F +ILLVEHNMKAVM+ CDR+ VLHHGQLLATGTP EIR D V++AYLG + D Sbjct: 192 RDRFDTSILLVEHNMKAVMRTCDRLYVLHHGQLLATGTPAEIREDPQVLAAYLGNVNVD 250 >ref|YP_003982664.1| high-affinity branched-chain amino acid transport ATP-binding protein LivG [Achromobacter xylosoxidans A8] gb|ADP19949.1| high-affinity branched-chain amino acid transport ATP-binding protein LivG [Achromobacter xylosoxidans A8] Length = 244 Score = 325 bits (832), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 155/242 (64%), Positives = 193/242 (79%), Gaps = 2/242 (0%) Query: 17 HEVLARVTNLTRRFGGLVAVSDLNMEIRRQEILGLIGPNGAGKSTTFNLISGFFKPSSGR 76 ++VL +V ++RRFGGLVAV DL+ E+R+ EILGLIGPNGAGKSTTFN++SG++KPS G+ Sbjct: 3 NQVLLKVDGMSRRFGGLVAVKDLSFEVRKGEILGLIGPNGAGKSTTFNVVSGYYKPSGGQ 62 Query: 77 LYFDGKDMTGKSALEISRAGLVRTFQHGSLMRSMSVYENILIGAIGALPRGTKKERAARV 136 L F G+D+TG+SA ISR GLVRTFQH S++R M+VY+NI++G L K ER ARV Sbjct: 63 LTFMGRDITGQSAARISRQGLVRTFQHDSMLRDMTVYDNIVVGTFATLR--NKAERDARV 120 Query: 137 EETAEMLGLGPYLNEIAGTLPHGIQRLISIAIASAPRPKLLCLDEPLTGLNQTEVMTTLG 196 ETA ++GL L+EIAG L HG+QRL+SIAIA A RP LLCLDEPLTGLNQTE + L Sbjct: 121 RETAALMGLSEVLDEIAGNLSHGLQRLVSIAIAFAARPSLLCLDEPLTGLNQTEATSVLA 180 Query: 197 VFEKIRQVFGCTILLVEHNMKAVMQICDRIVVLHHGQLLATGTPDEIRHDDTVVSAYLGK 256 +F ++R+ +G ++LLVEHNMKAVM ICDRIVVL +G LATGTP EI+ D V+SAYLGK Sbjct: 181 IFRRMREEYGVSMLLVEHNMKAVMDICDRIVVLDYGVFLATGTPAEIQRDPRVISAYLGK 240 Query: 257 RH 258 RH Sbjct: 241 RH 242 >ref|YP_001629770.1| high-affinity branched-chain amino acid transport, ATP-binding protein [Bordetella petrii DSM 12804] emb|CAP41500.1| high-affinity branched-chain amino acid transport, ATP-binding protein [Bordetella petrii] Length = 244 Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 154/242 (63%), Positives = 193/242 (79%), Gaps = 2/242 (0%) Query: 17 HEVLARVTNLTRRFGGLVAVSDLNMEIRRQEILGLIGPNGAGKSTTFNLISGFFKPSSGR 76 ++VL +V L+RRFGGLVAV DL+ E+R+ EILGLIGPNGAGKSTTFN++SG++KPS G+ Sbjct: 3 NQVLLKVDGLSRRFGGLVAVKDLSFEVRKGEILGLIGPNGAGKSTTFNVVSGYYKPSGGK 62 Query: 77 LYFDGKDMTGKSALEISRAGLVRTFQHGSLMRSMSVYENILIGAIGALPRGTKKERAARV 136 L F G+D+TG+SA ISR GLVRTFQH S++R M+VY+NI++G + K ER ARV Sbjct: 63 LTFMGQDITGQSAARISRQGLVRTFQHDSMLRDMTVYDNIVVGTFATMRH--KAERDARV 120 Query: 137 EETAEMLGLGPYLNEIAGTLPHGIQRLISIAIASAPRPKLLCLDEPLTGLNQTEVMTTLG 196 ETA ++GL L+E+AG L HG+QRL+SIAIA A RP LLCLDEPLTGLNQTE + L Sbjct: 121 RETAALMGLSEVLSEVAGNLSHGLQRLVSIAIAFAARPSLLCLDEPLTGLNQTEASSVLA 180 Query: 197 VFEKIRQVFGCTILLVEHNMKAVMQICDRIVVLHHGQLLATGTPDEIRHDDTVVSAYLGK 256 +F ++R+ +G ++LLVEHNMKAVM ICDRIVVL +G LATGTP EI+ D V+SAYLGK Sbjct: 181 IFRRMREEYGVSMLLVEHNMKAVMDICDRIVVLDYGVFLATGTPAEIQRDPRVISAYLGK 240 Query: 257 RH 258 RH Sbjct: 241 RH 242 >ref|NP_882720.1| ABC transport system ATP-binding protein [Bordetella parapertussis 12822] ref|NP_886918.1| ABC transporter ATP-binding protein [Bordetella bronchiseptica RB50] emb|CAE35950.1| ABC transport system ATP-binding protein [Bordetella parapertussis] emb|CAE30867.1| ABC transport system ATP-binding protein [Bordetella bronchiseptica RB50] Length = 244 Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 155/241 (64%), Positives = 190/241 (78%), Gaps = 2/241 (0%) Query: 18 EVLARVTNLTRRFGGLVAVSDLNMEIRRQEILGLIGPNGAGKSTTFNLISGFFKPSSGRL 77 +VL +V +TRRFGGLVAV DL+ E+R EILGLIGPNGAGKSTTFN++SG++KP+SGRL Sbjct: 4 QVLLKVEGMTRRFGGLVAVKDLSFEVREGEILGLIGPNGAGKSTTFNVVSGYYKPTSGRL 63 Query: 78 YFDGKDMTGKSALEISRAGLVRTFQHGSLMRSMSVYENILIGAIGALPRGTKKERAARVE 137 F G+D+TG I+R GLVRTFQH SL+R M+VY+NI++G L + + ER ARV Sbjct: 64 AFKGRDITGLGPARIARQGLVRTFQHDSLLREMTVYDNIVVGTFAMLRQ--RHERDARVR 121 Query: 138 ETAEMLGLGPYLNEIAGTLPHGIQRLISIAIASAPRPKLLCLDEPLTGLNQTEVMTTLGV 197 ETA ++GL L+E+AG LPHG+QRL+SIAIA A RP LLCLDEPLTGLNQTE M L + Sbjct: 122 ETAALMGLTEVLDEVAGNLPHGLQRLVSIAIAFAARPSLLCLDEPLTGLNQTEAMAVLAI 181 Query: 198 FEKIRQVFGCTILLVEHNMKAVMQICDRIVVLHHGQLLATGTPDEIRHDDTVVSAYLGKR 257 F ++R+ G +ILLVEHNMKAVM ICDRIVVL +G LATGTP EI+ + V+SAYLGKR Sbjct: 182 FRRMREEHGISILLVEHNMKAVMDICDRIVVLDYGVFLATGTPQEIQTNPDVISAYLGKR 241 Query: 258 H 258 H Sbjct: 242 H 242 >ref|YP_004127585.1| abc transporter related protein [Alicycliphilus denitrificans BC] ref|YP_004387390.1| monosaccharide-transporting ATPase [Alicycliphilus denitrificans K601] gb|ADV00698.1| ABC transporter related protein [Alicycliphilus denitrificans BC] gb|AEB83874.1| Monosaccharide-transporting ATPase [Alicycliphilus denitrificans K601] Length = 249 Score = 277 bits (709), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 135/240 (56%), Positives = 179/240 (74%), Gaps = 10/240 (4%) Query: 25 NLTRRFGGLVAVSDLNMEIRRQEILGLIGPNGAGKSTTFNLISGFFKPSSGRLYFDGKDM 84 NL+++F GL+AVS ++++IRR EI+GLIGPNGAGKSTTFNL+SGF P++G L G DM Sbjct: 12 NLSKQFKGLLAVSGVDIDIRRGEIVGLIGPNGAGKSTTFNLLSGFLAPTTGTLTIAGADM 71 Query: 85 TGKSALEISRAGLVRTFQHGSLMRSMSVYENILIGAIGALPRGTKKERAAR------VEE 138 TG S IS+ GLVRTFQHGS + +M+V +N+LIGA+G GT+ R AR + + Sbjct: 72 TGASPERISQQGLVRTFQHGSYLPTMTVRDNVLIGALG----GTRNGRVARGEQERVIAQ 127 Query: 139 TAEMLGLGPYLNEIAGTLPHGIQRLISIAIASAPRPKLLCLDEPLTGLNQTEVMTTLGVF 198 + GL + N +A LPHG+QRL+S+AIA A RP+L+C DEPLTGLNQTEV TL V+ Sbjct: 128 AIALFGLSDHANAVAKNLPHGLQRLLSMAIAFAARPQLICYDEPLTGLNQTEVAETLKVY 187 Query: 199 EKIRQVFGCTILLVEHNMKAVMQICDRIVVLHHGQLLATGTPDEIRHDDTVVSAYLGKRH 258 +++ G ++LLVEHNM+AVM ICDRI VLHHG+++ TGTPDE++ D V+ AYLG+ H Sbjct: 188 RRLKSEHGMSMLLVEHNMRAVMAICDRIYVLHHGEIIFTGTPDEVKTSDAVLKAYLGEAH 247