BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0567.p (193 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777566.1| peptidyl-tRNA hydrolase [Herbaspirillum sero... 350 5e-95 ref|YP_004751268.1| peptidyl-tRNA hydrolase [Collimonas fungivor... 338 3e-91 ref|YP_001354820.1| peptidyl-tRNA hydrolase [Janthinobacterium s... 330 5e-89 ref|ZP_08276487.1| Peptidyl-tRNA hydrolase [Oxalobacteraceae bac... 326 9e-88 ref|YP_001101130.1| peptidyl-tRNA hydrolase [Herminiimonas arsen... 320 7e-86 >ref|YP_003777566.1| peptidyl-tRNA hydrolase [Herbaspirillum seropedicae SmR1] gb|ADJ65658.1| peptidyl-tRNA hydrolase protein [Herbaspirillum seropedicae SmR1] Length = 192 Score = 350 bits (899), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 165/190 (86%), Positives = 179/190 (94%) Query: 1 MSIRLIVGLGNPGPEYEQTRHNAGFWLVDNLAGGIRLARETRFNALAAKISVAGQEVWVL 60 MSIRLIVGLGNPGPEYEQTRHNAGFWLVDNLAG +RLARE RFNALA K S+AG EVW+L Sbjct: 1 MSIRLIVGLGNPGPEYEQTRHNAGFWLVDNLAGPVRLAREQRFNALAGKTSIAGSEVWLL 60 Query: 61 EPQTFMNRSGQSVGALARFYKIAPDEVLVVHDELDLPPGSAKIKKGGSSGGHNGLKDITA 120 EPQT+MNRSGQSVGALARFYKI PDEVLVVHDELDLPPG+AKIKKGGSSGGHNGLKDITA Sbjct: 61 EPQTYMNRSGQSVGALARFYKINPDEVLVVHDELDLPPGAAKIKKGGSSGGHNGLKDITA 120 Query: 121 ALGTQDYWRLRIGIGHPRTMGLQQPVADFVLHRPRKEEQALINDAIEKSLDAIPLLCEGK 180 ALGTQDYWRLR+GIGHPRT+GLQQPVADFVLHRPRKEEQ LIN+A+++SL+ IPLL +GK Sbjct: 121 ALGTQDYWRLRLGIGHPRTLGLQQPVADFVLHRPRKEEQNLINEALDQSLNVIPLLVQGK 180 Query: 181 FEAGMMQLHT 190 FE MM+LHT Sbjct: 181 FEQAMMELHT 190 >ref|YP_004751268.1| peptidyl-tRNA hydrolase [Collimonas fungivorans Ter331] gb|AEK60445.1| Peptidyl-tRNA hydrolase [Collimonas fungivorans Ter331] Length = 194 Score = 338 bits (866), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 163/193 (84%), Positives = 173/193 (89%), Gaps = 2/193 (1%) Query: 1 MSIRLIVGLGNPGPEYEQTRHNAGFWLVDNLAG--GIRLARETRFNALAAKISVAGQEVW 58 MSIRLI GLGNPGPEYEQTRHNAGFWLVDNLA G +LARE RFNALAAK ++AGQEVW Sbjct: 1 MSIRLIAGLGNPGPEYEQTRHNAGFWLVDNLANDLGRKLAREARFNALAAKTNIAGQEVW 60 Query: 59 VLEPQTFMNRSGQSVGALARFYKIAPDEVLVVHDELDLPPGSAKIKKGGSSGGHNGLKDI 118 +LEPQTFMNRSGQSVGALARFYKIA DE+LVVHDELDLPPGSAK+KKGGSSGGHNGLKDI Sbjct: 61 LLEPQTFMNRSGQSVGALARFYKIAADEILVVHDELDLPPGSAKLKKGGSSGGHNGLKDI 120 Query: 119 TAALGTQDYWRLRIGIGHPRTMGLQQPVADFVLHRPRKEEQALINDAIEKSLDAIPLLCE 178 TAALGTQDYWRLR+GIGHPRT+ LQQ V DFVLHRPRK+EQ I +AI SL IPLLCE Sbjct: 121 TAALGTQDYWRLRLGIGHPRTLSLQQAVVDFVLHRPRKDEQVPIEEAIADSLKIIPLLCE 180 Query: 179 GKFEAGMMQLHTA 191 GKFEA MQLHTA Sbjct: 181 GKFEAATMQLHTA 193 >ref|YP_001354820.1| peptidyl-tRNA hydrolase [Janthinobacterium sp. Marseille] gb|ABR88698.1| peptidyl-tRNA hydrolase [Janthinobacterium sp. Marseille] Length = 195 Score = 330 bits (847), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 159/193 (82%), Positives = 171/193 (88%), Gaps = 3/193 (1%) Query: 1 MSIRLIVGLGNPGPEYEQTRHNAGFWLVDNLAGGI---RLARETRFNALAAKISVAGQEV 57 M IRLIVGLGNPG EYEQTRHNAGFWLVD LA + L+RE+++NALAAK +AGQEV Sbjct: 1 MPIRLIVGLGNPGQEYEQTRHNAGFWLVDQLARNMPRCNLSRESKYNALAAKTVIAGQEV 60 Query: 58 WVLEPQTFMNRSGQSVGALARFYKIAPDEVLVVHDELDLPPGSAKIKKGGSSGGHNGLKD 117 W+LEPQTFMNRSGQSVGALARFYKI PDEVLV HDELDLPPG AK+KKGGSSGGHNGLKD Sbjct: 61 WLLEPQTFMNRSGQSVGALARFYKILPDEVLVAHDELDLPPGVAKLKKGGSSGGHNGLKD 120 Query: 118 ITAALGTQDYWRLRIGIGHPRTMGLQQPVADFVLHRPRKEEQALINDAIEKSLDAIPLLC 177 ITAALGTQDYWRLRIGIGHPRT+ LQQ V DFVLHRPRKEEQ LI++AI KSLD IP+LC Sbjct: 121 ITAALGTQDYWRLRIGIGHPRTLNLQQAVVDFVLHRPRKEEQPLIDEAIAKSLDVIPMLC 180 Query: 178 EGKFEAGMMQLHT 190 EGKFEA MQLHT Sbjct: 181 EGKFEAATMQLHT 193 >ref|ZP_08276487.1| Peptidyl-tRNA hydrolase [Oxalobacteraceae bacterium IMCC9480] gb|EGF30045.1| Peptidyl-tRNA hydrolase [Oxalobacteraceae bacterium IMCC9480] Length = 196 Score = 326 bits (836), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 155/194 (79%), Positives = 174/194 (89%), Gaps = 3/194 (1%) Query: 1 MSIRLIVGLGNPGPEYEQTRHNAGFWLVDNLAGGI---RLARETRFNALAAKISVAGQEV 57 M+IRLIVGLGNPGPEYEQTRHNAGFWLVD LA GI +L RETRFNA AAK ++ EV Sbjct: 1 MAIRLIVGLGNPGPEYEQTRHNAGFWLVDKLANGIARCKLVRETRFNAFAAKAAIEQHEV 60 Query: 58 WVLEPQTFMNRSGQSVGALARFYKIAPDEVLVVHDELDLPPGSAKIKKGGSSGGHNGLKD 117 W+LEPQTFMNRSGQSVGALARFYKIA DEVLVVHDELDL PG+A++KKGGSSGGHNGLKD Sbjct: 61 WLLEPQTFMNRSGQSVGALARFYKIAVDEVLVVHDELDLLPGAARLKKGGSSGGHNGLKD 120 Query: 118 ITAALGTQDYWRLRIGIGHPRTMGLQQPVADFVLHRPRKEEQALINDAIEKSLDAIPLLC 177 ITAALG+QDYWRLR+GIGHPRT G QQPVAD+VLHRPRKEEQ L+++AI KS+D IP+LC Sbjct: 121 ITAALGSQDYWRLRLGIGHPRTQGSQQPVADYVLHRPRKEEQPLLDEAIAKSIDIIPMLC 180 Query: 178 EGKFEAGMMQLHTA 191 +GKF+A M+LHTA Sbjct: 181 DGKFDAATMRLHTA 194 >ref|YP_001101130.1| peptidyl-tRNA hydrolase [Herminiimonas arsenicoxydans] emb|CAL63009.1| peptidyl-tRNA hydrolase (PTH) [Herminiimonas arsenicoxydans] Length = 196 Score = 320 bits (820), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 154/196 (78%), Positives = 168/196 (85%), Gaps = 3/196 (1%) Query: 1 MSIRLIVGLGNPGPEYEQTRHNAGFWLVDNLAGG---IRLARETRFNALAAKISVAGQEV 57 M IRLIVGLGNPG EYEQTRHNAGFWLVD LA L+RE++++ALAAK ++AGQEV Sbjct: 1 MPIRLIVGLGNPGQEYEQTRHNAGFWLVDELARATPRCTLSRESKYSALAAKTAIAGQEV 60 Query: 58 WVLEPQTFMNRSGQSVGALARFYKIAPDEVLVVHDELDLPPGSAKIKKGGSSGGHNGLKD 117 W+LEPQTFMNRSGQSVGALARFYKI PDE+LV HDELDLPPG AK+KKGGSSGGHNGLKD Sbjct: 61 WLLEPQTFMNRSGQSVGALARFYKILPDEILVAHDELDLPPGIAKLKKGGSSGGHNGLKD 120 Query: 118 ITAALGTQDYWRLRIGIGHPRTMGLQQPVADFVLHRPRKEEQALINDAIEKSLDAIPLLC 177 ITAALGTQDYWRLRIGIGHPRT+ L Q V DFVLHRPRKEEQ LI++AI KSL IPLLC Sbjct: 121 ITAALGTQDYWRLRIGIGHPRTLNLNQAVVDFVLHRPRKEEQPLIDEAIAKSLSIIPLLC 180 Query: 178 EGKFEAGMMQLHTAAK 193 EG F A M+LHT K Sbjct: 181 EGNFNAAAMKLHTVEK 196