BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0551.p (242 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777555.1| PP-loop superfamily ATPase [Herbaspirillum s... 419 e-115 ref|YP_004754661.1| queuosine Biosynthesis queC ATPase [Collimon... 410 e-113 ref|YP_001354876.1| ExsB protein [Janthinobacterium sp. Marseill... 404 e-111 ref|YP_001101172.1| regulatory protein [Herminiimonas arsenicoxy... 392 e-107 ref|ZP_08275781.1| Queuosine Biosynthesis QueC ATPase [Oxalobact... 391 e-107 >ref|YP_003777555.1| PP-loop superfamily ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ65647.1| PP-loop superfamily ATPase protein [Herbaspirillum seropedicae SmR1] Length = 263 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 199/239 (83%), Positives = 215/239 (89%), Gaps = 5/239 (2%) Query: 5 TTPRPSLP-----HRALVLFSGGQDSATCLAWALSRYEKVETIGFDYGQRHAIELTVRPA 59 ++P PSL ALVLFSGGQDS TCLAWALSRY++VETIGFDYGQRHAIEL VRPA Sbjct: 18 SSPSPSLAPTLNTQSALVLFSGGQDSTTCLAWALSRYQRVETIGFDYGQRHAIELAVRPA 77 Query: 60 LLEKMRGFSDEWNNKLGEDHMVDLSLISKISDTALTRDVAISMQENGLPNTFVPGRNLLF 119 LLE+MR FS +W +LGEDHM+DLSLI KISDTALTRDV I+MQ+NGLPNTFVPGRNLLF Sbjct: 78 LLERMRAFSPDWQTRLGEDHMIDLSLIGKISDTALTRDVEIAMQDNGLPNTFVPGRNLLF 137 Query: 120 MTVAATVAYRRGLDVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMATQLKVETPLMWI 179 MTVAAT+AYRRGL+VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMATQLKVETPLMWI Sbjct: 138 MTVAATLAYRRGLNVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMATQLKVETPLMWI 197 Query: 180 DKAATWRLSEELGGKALVDLIRADTHTCYLGERGALHDWGYGCGTCPACDLRARGYRQY 238 DKA TW L+E LGG LVDLIR DTHTCYLGERGALHDWG+GCG CPAC+LRARGY+QY Sbjct: 198 DKAGTWALAELLGGAPLVDLIRTDTHTCYLGERGALHDWGHGCGKCPACELRARGYQQY 256 >ref|YP_004754661.1| queuosine Biosynthesis queC ATPase [Collimonas fungivorans Ter331] gb|AAT42387.1| putative PP-loop superfamily ATPase [Collimonas fungivorans Ter331] gb|AEK63838.1| Queuosine Biosynthesis QueC ATPase [Collimonas fungivorans Ter331] Length = 236 Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust. Identities = 190/227 (83%), Positives = 211/227 (92%) Query: 12 PHRALVLFSGGQDSATCLAWALSRYEKVETIGFDYGQRHAIELTVRPALLEKMRGFSDEW 71 P+ A+VLFSGGQDS TCLAWALSRYE+VETIGFDYGQRHA+ELTVRP LL+K+R +W Sbjct: 4 PNGAIVLFSGGQDSTTCLAWALSRYERVETIGFDYGQRHAVELTVRPVLLQKIRAQFPQW 63 Query: 72 NNKLGEDHMVDLSLISKISDTALTRDVAISMQENGLPNTFVPGRNLLFMTVAATVAYRRG 131 KLGEDH++DLSLISKIS TA+T DV I MQENGLPNTFVPGRNLLFMTVAATVAYRRG Sbjct: 64 AGKLGEDHLIDLSLISKISSTAMTEDVEIVMQENGLPNTFVPGRNLLFMTVAATVAYRRG 123 Query: 132 LDVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMATQLKVETPLMWIDKAATWRLSEEL 191 L+VLVGGMCETDFSGYPDCRDDTMKALQVALNLGMATQ+K+ETPLMWIDK+ TW+L+++L Sbjct: 124 LNVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMATQIKLETPLMWIDKSETWKLAQDL 183 Query: 192 GGKALVDLIRADTHTCYLGERGALHDWGYGCGTCPACDLRARGYRQY 238 GG ALVDLIRADTHTCYLG+RGALHDWGYGCGTCPAC LRARGY+Q+ Sbjct: 184 GGDALVDLIRADTHTCYLGQRGALHDWGYGCGTCPACALRARGYQQF 230 >ref|YP_001354876.1| ExsB protein [Janthinobacterium sp. Marseille] sp|A6T2X9.1|QUEC_JANMA RecName: Full=7-cyano-7-deazaguanine synthase; AltName: Full=7-cyano-7-carbaguanine synthase; AltName: Full=PreQ(0) synthase; AltName: Full=Queuosine biosynthesis protein QueC gb|ABR89782.1| ExsB protein [Janthinobacterium sp. Marseille] Length = 235 Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust. Identities = 187/224 (83%), Positives = 206/224 (91%) Query: 15 ALVLFSGGQDSATCLAWALSRYEKVETIGFDYGQRHAIELTVRPALLEKMRGFSDEWNNK 74 ALVLFSGGQDS TC+AWAL RY KVETIGFDYGQRHA+EL VRP +L +R + EWN K Sbjct: 7 ALVLFSGGQDSTTCVAWALKRYAKVETIGFDYGQRHAVELEVRPDVLRSLRDINPEWNKK 66 Query: 75 LGEDHMVDLSLISKISDTALTRDVAISMQENGLPNTFVPGRNLLFMTVAATVAYRRGLDV 134 LGEDHM+DLSLISKIS+TA+T+DV I+M ENGLPNTFVPGRNLLFMTVAATVAYRRGLDV Sbjct: 67 LGEDHMIDLSLISKISNTAMTQDVEITMMENGLPNTFVPGRNLLFMTVAATVAYRRGLDV 126 Query: 135 LVGGMCETDFSGYPDCRDDTMKALQVALNLGMATQLKVETPLMWIDKAATWRLSEELGGK 194 LVGGMCETDFSGYPDCRDDTMKALQVALNLGMAT+LK+ETPLMWIDKA TW+++++LGGK Sbjct: 127 LVGGMCETDFSGYPDCRDDTMKALQVALNLGMATRLKLETPLMWIDKAETWKMAQDLGGK 186 Query: 195 ALVDLIRADTHTCYLGERGALHDWGYGCGTCPACDLRARGYRQY 238 LVDLIRA THTCYLGERGALHDWGYGCGTCPAC+LRARGY + Sbjct: 187 PLVDLIRAGTHTCYLGERGALHDWGYGCGTCPACELRARGYANF 230 >ref|YP_001101172.1| regulatory protein [Herminiimonas arsenicoxydans] sp|A4G964.1|QUEC_HERAR RecName: Full=7-cyano-7-deazaguanine synthase; AltName: Full=7-cyano-7-carbaguanine synthase; AltName: Full=PreQ(0) synthase; AltName: Full=Queuosine biosynthesis protein QueC emb|CAL63051.1| Queuosine biosynthesis protein QueC [Herminiimonas arsenicoxydans] Length = 233 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 182/227 (80%), Positives = 203/227 (89%) Query: 13 HRALVLFSGGQDSATCLAWALSRYEKVETIGFDYGQRHAIELTVRPALLEKMRGFSDEWN 72 + ALVLFSGGQDS TCLAWAL+ Y +VETIGFDYGQRHAIEL VRP LLEKMR S EW+ Sbjct: 5 NSALVLFSGGQDSTTCLAWALTHYARVETIGFDYGQRHAIELAVRPFLLEKMRLISPEWD 64 Query: 73 NKLGEDHMVDLSLISKISDTALTRDVAISMQENGLPNTFVPGRNLLFMTVAATVAYRRGL 132 +LG DHM+DLSLI+KIS+TALT +V I+M ENGLPNTFVPGRNLLFMTVAATVAYRRGL Sbjct: 65 GRLGADHMIDLSLIAKISNTALTSNVEIAMLENGLPNTFVPGRNLLFMTVAATVAYRRGL 124 Query: 133 DVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMATQLKVETPLMWIDKAATWRLSEELG 192 DVLVGGMCETDFSGYPDCRDDTMKALQV LNLGMAT+LKVETPLMWIDKAATW+++++LG Sbjct: 125 DVLVGGMCETDFSGYPDCRDDTMKALQVTLNLGMATKLKVETPLMWIDKAATWKMAQDLG 184 Query: 193 GKALVDLIRADTHTCYLGERGALHDWGYGCGTCPACDLRARGYRQYV 239 G L++L+R THTCYLGERG LHDWGYGCG CPAC LRARGY ++ Sbjct: 185 GTPLLNLVRTGTHTCYLGERGELHDWGYGCGNCPACKLRARGYADFI 231 >ref|ZP_08275781.1| Queuosine Biosynthesis QueC ATPase [Oxalobacteraceae bacterium IMCC9480] gb|EGF30744.1| Queuosine Biosynthesis QueC ATPase [Oxalobacteraceae bacterium IMCC9480] Length = 235 Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust. Identities = 185/231 (80%), Positives = 205/231 (88%) Query: 10 SLPHRALVLFSGGQDSATCLAWALSRYEKVETIGFDYGQRHAIELTVRPALLEKMRGFSD 69 +LP+ ALVLFSGGQDS TC+AWAL RY +VETIGFDYGQRHAIE+TVRP +L +R S Sbjct: 2 TLPNGALVLFSGGQDSTTCVAWALQRYARVETIGFDYGQRHAIEMTVRPDVLASLRTQSP 61 Query: 70 EWNNKLGEDHMVDLSLISKISDTALTRDVAISMQENGLPNTFVPGRNLLFMTVAATVAYR 129 +W+++LGEDH++DLSLI KISDTALT +V I+M ENGLPNTFVPGRNLLFM VAAT+AYR Sbjct: 62 DWDHRLGEDHVIDLSLIGKISDTALTSNVEIAMLENGLPNTFVPGRNLLFMMVAATLAYR 121 Query: 130 RGLDVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMATQLKVETPLMWIDKAATWRLSE 189 RGLDVLVGGMCETDFSGYPDCRDDTMKALQV LNLGMAT+LK+ETPLMWIDKAATW L+E Sbjct: 122 RGLDVLVGGMCETDFSGYPDCRDDTMKALQVTLNLGMATRLKLETPLMWIDKAATWALAE 181 Query: 190 ELGGKALVDLIRADTHTCYLGERGALHDWGYGCGTCPACDLRARGYRQYVQ 240 LGG LVDLIR THTCYLGERGALHDWGYGCGTCPAC LRA+GY Y Q Sbjct: 182 SLGGDTLVDLIRTGTHTCYLGERGALHDWGYGCGTCPACALRAKGYAGYRQ 232