BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0547.p (285 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001354863.1| hypothetical protein mma_3173 [Janthinobacte... 554 e-156 ref|YP_003777550.1| hypothetical protein Hsero_4172 [Herbaspiril... 548 e-154 ref|YP_001101159.1| hypothetical protein HEAR2925 [Herminiimonas... 542 e-152 ref|ZP_08273185.1| LSU ribosomal protein L17p [Oxalobacteraceae ... 540 e-152 ref|YP_004754656.1| 50S ribosomal protein L17p [Collimonas fungi... 534 e-150 >ref|YP_001354863.1| hypothetical protein mma_3173 [Janthinobacterium sp. Marseille] gb|ABR91148.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 282 Score = 554 bits (1428), Expect = e-156, Method: Compositional matrix adjust. Identities = 263/277 (94%), Positives = 270/277 (97%) Query: 1 MLYPELFKSLEQVRWNMDKDIPWDKFDASLLSDEQAQTIRMNAITEWSALPATEMFLRDN 60 MLYPELFKSLEQVRWNM+KDIPWD+FD S L+DEQAQTIRMNAITEWSALPATEMFLRDN Sbjct: 1 MLYPELFKSLEQVRWNMEKDIPWDQFDGSKLTDEQAQTIRMNAITEWSALPATEMFLRDN 60 Query: 61 RGDSDFSAFMSVWFFEEQKHSLVLMEYLRRFKPEFAPTEEELHNVRFEFDPAPPLETLMM 120 RGDSDFSAFMSVWFFEEQKHSLVLMEYLRRF+PE+ PTEEELHNVRFEFDPAP LETLMM Sbjct: 61 RGDSDFSAFMSVWFFEEQKHSLVLMEYLRRFRPEYVPTEEELHNVRFEFDPAPALETLMM 120 Query: 121 HFCGEIRLNHWYRCASDWHTEPVIKQIYKIISQDEARHGGAYLRYMKKALVEVGDTARAA 180 HFCGEIRLNHWYRCASDWHTEPVIKQIYKIISQDEARHGGAYLRYMKKALVEVGD+ARAA Sbjct: 121 HFCGEIRLNHWYRCASDWHTEPVIKQIYKIISQDEARHGGAYLRYMKKALVEVGDSARAA 180 Query: 181 FAKIGVLMASARRTEKPLHPTNLHVNQALFPNDTVQSRLPDPEWLEHWLDTQIKFDSEWE 240 FAKIGVLMASARRTEKPLHPTNLHVNQ+LFPNDTVQSRLPDPEWLE WLD QIKFDSEWE Sbjct: 181 FAKIGVLMASARRTEKPLHPTNLHVNQSLFPNDTVQSRLPDPEWLERWLDGQIKFDSEWE 240 Query: 241 KKVVDRILHNMSLLFERTFETVQELNRYRKEIVTRMA 277 KKVVDRILHNMSLLFERTF TVQELNRYRKEIVTRMA Sbjct: 241 KKVVDRILHNMSLLFERTFGTVQELNRYRKEIVTRMA 277 >ref|YP_003777550.1| hypothetical protein Hsero_4172 [Herbaspirillum seropedicae SmR1] gb|ADJ65642.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 284 Score = 548 bits (1412), Expect = e-154, Method: Compositional matrix adjust. Identities = 261/284 (91%), Positives = 268/284 (94%) Query: 1 MLYPELFKSLEQVRWNMDKDIPWDKFDASLLSDEQAQTIRMNAITEWSALPATEMFLRDN 60 MLYPELFKSLEQVRWNMDKDIPWDKFDASLL+DEQAQTIRMNAITEWSALPATEMFLRDN Sbjct: 1 MLYPELFKSLEQVRWNMDKDIPWDKFDASLLTDEQAQTIRMNAITEWSALPATEMFLRDN 60 Query: 61 RGDSDFSAFMSVWFFEEQKHSLVLMEYLRRFKPEFAPTEEELHNVRFEFDPAPPLETLMM 120 RGDSDFSAFMSVWFFEEQKHSLVLMEYLRRF+P+ PTEEELHNVRFEFDPAPPLETLM+ Sbjct: 61 RGDSDFSAFMSVWFFEEQKHSLVLMEYLRRFRPDMCPTEEELHNVRFEFDPAPPLETLML 120 Query: 121 HFCGEIRLNHWYRCASDWHTEPVIKQIYKIISQDEARHGGAYLRYMKKALVEVGDTARAA 180 HFCGEIRLNHWYRCA+DWHTEPVIKQIYKIISQDEARHGGAYLRYMKKAL EVGD ARAA Sbjct: 121 HFCGEIRLNHWYRCAADWHTEPVIKQIYKIISQDEARHGGAYLRYMKKALNEVGDKARAA 180 Query: 181 FAKIGVLMASARRTEKPLHPTNLHVNQALFPNDTVQSRLPDPEWLEHWLDTQIKFDSEWE 240 FAKIGVLMASARRTEKPLHPTNLHVNQALFPNDTVQSRLPDPEWLE WLD QIKFD EWE Sbjct: 181 FAKIGVLMASARRTEKPLHPTNLHVNQALFPNDTVQSRLPDPEWLERWLDNQIKFDGEWE 240 Query: 241 KKVVDRILHNMSLLFERTFETVQELNRYRKEIVTRMAPPVRPAA 284 KKVVDRILHNMSLLFERTF VQELNRYRKE+ R+ P AA Sbjct: 241 KKVVDRILHNMSLLFERTFSNVQELNRYRKEVTQRILPSGAAAA 284 >ref|YP_001101159.1| hypothetical protein HEAR2925 [Herminiimonas arsenicoxydans] emb|CAL63038.1| Conserved hypothetical protein, putative ferritin/ribonucleotide reductase [Herminiimonas arsenicoxydans] Length = 284 Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust. Identities = 257/277 (92%), Positives = 266/277 (96%) Query: 1 MLYPELFKSLEQVRWNMDKDIPWDKFDASLLSDEQAQTIRMNAITEWSALPATEMFLRDN 60 MLYPELFKSLEQVRWNM+ DIPWD+FD S L+DEQAQTIRMNAITEWSALPATEMFLRDN Sbjct: 1 MLYPELFKSLEQVRWNMETDIPWDQFDGSKLTDEQAQTIRMNAITEWSALPATEMFLRDN 60 Query: 61 RGDSDFSAFMSVWFFEEQKHSLVLMEYLRRFKPEFAPTEEELHNVRFEFDPAPPLETLMM 120 R DSDF AFMSVWFFEEQKHSLVLMEYLRRFKPEF PTEEELHNVRFEFDPAP LETLMM Sbjct: 61 RDDSDFCAFMSVWFFEEQKHSLVLMEYLRRFKPEFVPTEEELHNVRFEFDPAPALETLMM 120 Query: 121 HFCGEIRLNHWYRCASDWHTEPVIKQIYKIISQDEARHGGAYLRYMKKALVEVGDTARAA 180 HFCGEIRLNHWYRCAS+WHTEPVIKQIYKIISQDEARHGGAYLRYMKKAL+EVGD+ARAA Sbjct: 121 HFCGEIRLNHWYRCASEWHTEPVIKQIYKIISQDEARHGGAYLRYMKKALIEVGDSARAA 180 Query: 181 FAKIGVLMASARRTEKPLHPTNLHVNQALFPNDTVQSRLPDPEWLEHWLDTQIKFDSEWE 240 FAKIGVLMASARRTEKPLHPTNLHVNQ+LFPNDTVQSRLPDPEWLE WLD QIKFD EWE Sbjct: 181 FAKIGVLMASARRTEKPLHPTNLHVNQSLFPNDTVQSRLPDPEWLERWLDGQIKFDGEWE 240 Query: 241 KKVVDRILHNMSLLFERTFETVQELNRYRKEIVTRMA 277 KKVVDRILHNMSLLFERTF +VQELNRYRKEIVTR+A Sbjct: 241 KKVVDRILHNMSLLFERTFGSVQELNRYRKEIVTRLA 277 >ref|ZP_08273185.1| LSU ribosomal protein L17p [Oxalobacteraceae bacterium IMCC9480] gb|EGF33329.1| LSU ribosomal protein L17p [Oxalobacteraceae bacterium IMCC9480] Length = 283 Score = 540 bits (1392), Expect = e-152, Method: Compositional matrix adjust. Identities = 256/280 (91%), Positives = 266/280 (95%) Query: 1 MLYPELFKSLEQVRWNMDKDIPWDKFDASLLSDEQAQTIRMNAITEWSALPATEMFLRDN 60 MLYPELFKSLEQVRWNMD D+PWDKFDAS L+DEQAQTIRMNAITEWSALPATEMFLRDN Sbjct: 1 MLYPELFKSLEQVRWNMDTDVPWDKFDASKLTDEQAQTIRMNAITEWSALPATEMFLRDN 60 Query: 61 RGDSDFSAFMSVWFFEEQKHSLVLMEYLRRFKPEFAPTEEELHNVRFEFDPAPPLETLMM 120 RGDSDFSAFMSVWFFEEQKHSLVLMEYLRRF+PEF PTE EL NVRFEFDPAP LETLMM Sbjct: 61 RGDSDFSAFMSVWFFEEQKHSLVLMEYLRRFRPEFVPTEAELDNVRFEFDPAPALETLMM 120 Query: 121 HFCGEIRLNHWYRCASDWHTEPVIKQIYKIISQDEARHGGAYLRYMKKALVEVGDTARAA 180 HFCGEIRLNHWYRCASDWHTEPVIKQIYK+ISQDEARHGGAYLRYMKKAL GD+ARAA Sbjct: 121 HFCGEIRLNHWYRCASDWHTEPVIKQIYKMISQDEARHGGAYLRYMKKALGVSGDSARAA 180 Query: 181 FAKIGVLMASARRTEKPLHPTNLHVNQALFPNDTVQSRLPDPEWLEHWLDTQIKFDSEWE 240 FAKIGVLMASARRTEKPLHPTNLHVNQ+LFPNDTVQSRLPDP+WLEHWLD QIKFD EWE Sbjct: 181 FAKIGVLMASARRTEKPLHPTNLHVNQSLFPNDTVQSRLPDPDWLEHWLDGQIKFDGEWE 240 Query: 241 KKVVDRILHNMSLLFERTFETVQELNRYRKEIVTRMAPPV 280 KKVV+RILHNMSLLFER+F TVQELNRYRKE+V RMA PV Sbjct: 241 KKVVERILHNMSLLFERSFTTVQELNRYRKEVVNRMALPV 280 >ref|YP_004754656.1| 50S ribosomal protein L17p [Collimonas fungivorans Ter331] gb|AAT42409.1| unknown [Collimonas fungivorans Ter331] gb|AEK63833.1| LSU ribosomal protein L17p [Collimonas fungivorans Ter331] Length = 290 Score = 534 bits (1375), Expect = e-150, Method: Compositional matrix adjust. Identities = 257/285 (90%), Positives = 265/285 (92%), Gaps = 1/285 (0%) Query: 1 MLYPELFKSLEQVRWNMDKDIPWDKFDASLLSDEQAQTIRMNAITEWSALPATEMFLRDN 60 MLYPELFKSLEQVRWNM+ DIPWDKFDA+ LSDEQAQTIRMNAITEWSALPATEMFLRDN Sbjct: 6 MLYPELFKSLEQVRWNMETDIPWDKFDATQLSDEQAQTIRMNAITEWSALPATEMFLRDN 65 Query: 61 RGDSDFSAFMSVWFFEEQKHSLVLMEYLRRFKPEFAPTEEELHNVRFEFDPAPPLETLMM 120 GDSDF AFMSVWFFEEQKHSLVLMEYLRRF+PE PTE EL VRFEFDPAPPLETLMM Sbjct: 66 HGDSDFCAFMSVWFFEEQKHSLVLMEYLRRFRPELVPTEAELDKVRFEFDPAPPLETLMM 125 Query: 121 HFCGEIRLNHWYRCASDWHTEPVIKQIYKIISQDEARHGGAYLRYMKKALVEVGDTARAA 180 HFCGEIRLNHWYRCASDWHTEPVIKQIYKIISQDEARHGGAYLRYMKKAL EVGD+A AA Sbjct: 126 HFCGEIRLNHWYRCASDWHTEPVIKQIYKIISQDEARHGGAYLRYMKKALSEVGDSASAA 185 Query: 181 FAKIGVLMASARRTEKPLHPTNLHVNQALFPNDTVQSRLPDPEWLEHWLDTQIKFDSEWE 240 FAKIGVLMASARRTEKPLHPTNLHVNQALFPNDTVQSRLPDPEWLE WLD QIKFD WE Sbjct: 186 FAKIGVLMASARRTEKPLHPTNLHVNQALFPNDTVQSRLPDPEWLERWLDDQIKFDGVWE 245 Query: 241 KKVVDRILHNMSLLFERTFETVQELNRYRKEIVTRMAPPVRPAAA 285 KKVVDRILHNMSLLFERTF+TVQELNRYRKE+V R+A + PA A Sbjct: 246 KKVVDRILHNMSLLFERTFDTVQELNRYRKEVVARLA-TLTPAPA 289