BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0527.p         (166 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003777532.1| transmembrane protein [Herbaspirillum serope...   179   2e-43
ref|YP_004751221.1| putative transmembrane protein [Collimonas f...   178   2e-43
ref|YP_001354836.1| hypothetical protein mma_3146 [Janthinobacte...   172   1e-41
ref|YP_001101146.1| hypothetical protein HEAR2912 [Herminiimonas...   168   3e-40
ref|ZP_08273199.1| hypothetical protein IMCC9480_571 [Oxalobacte...   140   7e-32

>ref|YP_003777532.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ65624.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
          Length = 188

 Score =  179 bits (453), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 81/108 (75%), Positives = 93/108 (86%)

Query: 24  GRWKLLLVVAVCAAPMIASYLTYYVIKPESRTNYGTLLDPREYPIPPLGSTALDGKPARL 83
           GRWK+L VVAVCAAPMIASYLTYYVIKP+SR NYG L+DPR+YPIP LGS A+DG PA L
Sbjct: 2   GRWKMLAVVAVCAAPMIASYLTYYVIKPQSRNNYGALIDPRQYPIPDLGSRAIDGSPATL 61

Query: 84  EDYKGKWVLLQVSGGECDNACKTRLFAMRQLRLMQGKEMERIERVWXL 131
            DY+GKWV+LQV GG+C   C+ +LF +RQLRLMQGKEMERIERVW +
Sbjct: 62  ADYRGKWVMLQVDGGDCAEPCRQKLFTLRQLRLMQGKEMERIERVWLV 109


>ref|YP_004751221.1| putative transmembrane protein [Collimonas fungivorans Ter331]
 gb|AEK60398.1| putative transmembrane protein [Collimonas fungivorans Ter331]
          Length = 207

 Score =  178 bits (452), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 84/126 (66%), Positives = 98/126 (77%), Gaps = 1/126 (0%)

Query: 17  QDQQRKSGRWKLLLVVAVCAAPMIASYLTYYVIKPESRTNYGTLLDPREYPIPPLGSTAL 76
           +++ R  GRWKL  V+AVCAAPMIASYLTYYVIKP+SR NYG LLDPR+YP+P LGSTAL
Sbjct: 14  ENKPRWGGRWKLFAVIAVCAAPMIASYLTYYVIKPQSRNNYGELLDPRDYPVPELGSTAL 73

Query: 77  DGKPARLEDYKGKWVLLQVSGGECDNACKTRLFAMRQLRLMQGKEMERIERVWXLCCANT 136
           DGKP  L+ Y+GKW++LQ  GG C   C+ +LF MRQLRLMQGKEMERIERVW L   + 
Sbjct: 74  DGKPLTLDAYQGKWLMLQADGGACPKTCQDKLFEMRQLRLMQGKEMERIERVW-LITDDQ 132

Query: 137 TAPTCC 142
             PT  
Sbjct: 133 PLPTMV 138


>ref|YP_001354836.1| hypothetical protein mma_3146 [Janthinobacterium sp. Marseille]
 gb|ABR90774.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 194

 Score =  172 bits (437), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 77/113 (68%), Positives = 92/113 (81%)

Query: 20  QRKSGRWKLLLVVAVCAAPMIASYLTYYVIKPESRTNYGTLLDPREYPIPPLGSTALDGK 79
            +  GRWKL  V+ VCAAP+I SY TYYVIKP+SRTNYGTL+DPR+YPIP LG+T LD K
Sbjct: 4   NKNKGRWKLFAVILVCAAPIILSYFTYYVIKPQSRTNYGTLIDPRDYPIPALGATTLDKK 63

Query: 80  PARLEDYKGKWVLLQVSGGECDNACKTRLFAMRQLRLMQGKEMERIERVWXLC 132
           PA LE Y+GKWV+LQVSG EC+ +C+ +L  MRQLRL QGKEM+RIERVW + 
Sbjct: 64  PATLESYQGKWVMLQVSGAECEASCEKKLHDMRQLRLAQGKEMDRIERVWLIT 116


>ref|YP_001101146.1| hypothetical protein HEAR2912 [Herminiimonas arsenicoxydans]
 emb|CAL63025.1| Conserved hypothetical protein; putative thioredoxin domain
           [Herminiimonas arsenicoxydans]
          Length = 194

 Score =  168 bits (425), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 74/115 (64%), Positives = 89/115 (77%)

Query: 18  DQQRKSGRWKLLLVVAVCAAPMIASYLTYYVIKPESRTNYGTLLDPREYPIPPLGSTALD 77
           +Q +  GRWKL LV+  CA+P+I SYLTYYVIKP+SRTNYG  +DPR YPIP LG+  LD
Sbjct: 2   EQNKHKGRWKLFLVILACASPIILSYLTYYVIKPQSRTNYGAFIDPRNYPIPELGTRGLD 61

Query: 78  GKPARLEDYKGKWVLLQVSGGECDNACKTRLFAMRQLRLMQGKEMERIERVWXLC 132
           GKP  L+ Y+GKW++LQV  GEC  AC+ +L  MRQLRL QGKEMERIERVW + 
Sbjct: 62  GKPVALDAYQGKWIMLQVDSGECPAACEKKLHDMRQLRLAQGKEMERIERVWLIT 116


>ref|ZP_08273199.1| hypothetical protein IMCC9480_571 [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF33343.1| hypothetical protein IMCC9480_571 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 208

 Score =  140 bits (352), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 65/118 (55%), Positives = 85/118 (72%), Gaps = 2/118 (1%)

Query: 16  PQDQQRKSGRWKLLLVVAVCAAPMIASYLTYYVIKPESRTNYGTLLDPREYPIPP-LGST 74
           P D+Q  SGRWKL  ++ VCA P+IASY TYYVIKP++RTNYG  +D   +PIP  L +T
Sbjct: 14  PTDRQ-ASGRWKLFAILGVCAFPLIASYFTYYVIKPQARTNYGDFIDYTVHPIPADLNTT 72

Query: 75  ALDGKPARLEDYKGKWVLLQVSGGECDNACKTRLFAMRQLRLMQGKEMERIERVWXLC 132
            LDG P  L+D +GKW++L V GG C  AC  +L+ +RQLR+ QG+E +RIERVW + 
Sbjct: 73  TLDGAPKGLKDLEGKWLMLTVDGGACAEACSKKLYDIRQLRVTQGRERDRIERVWLIT 130