BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0504.p (301 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002800235.1| Rhodanese-like protein [Azotobacter vineland... 376 e-102 ref|YP_004227777.1| Rhodanese domain-containing protein [Burkhol... 364 1e-98 ref|ZP_02885725.1| Rhodanese domain protein [Burkholderia gramin... 363 1e-98 ref|YP_001668747.1| rhodanese domain-containing protein [Pseudom... 363 1e-98 ref|YP_004752721.1| Rhodanese-like sulfurtransferase [Collimonas... 360 1e-97 >ref|YP_002800235.1| Rhodanese-like protein [Azotobacter vinelandii DJ] gb|ACO79260.1| Rhodanese-like protein [Azotobacter vinelandii DJ] Length = 527 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 193/282 (68%), Positives = 225/282 (79%), Gaps = 8/282 (2%) Query: 10 VDTRNFQQVRDDLLARREIALLDVREEAPHAEAHPLFASNLSFSHLELLAYARIPRRDTA 69 + R+F +R LLAR E+ALLDVREEAP AE HPLFA+N+ S L++ YAR+PRR Sbjct: 4 IAIRSFADIRAALLAREEVALLDVREEAPFAEGHPLFAANIPLSRLDIEVYARVPRRTAP 63 Query: 70 IVVLDDGEGLAQKATGRFVALGYSNVSVLDGGVAGWKAAGGELFQDVNVPSKSFGELVES 129 + V DDGEGLA++A R +ALGYS+V++L+GG+AGW+AAGGELF DVNVPSKSFGELVE+ Sbjct: 64 VTVYDDGEGLAERAAERLLALGYSDVALLEGGLAGWRAAGGELFIDVNVPSKSFGELVEA 123 Query: 130 KRHTPSLSAPEVKALLDAKENVVVLDARRFDEYQNMNIPTSISVPGAELVLRVRELAPDP 189 +RHTPSL+A EVKALLD K +VVVLDARRFDEYQ M+IP SVPGAELVLRVRELAP+P Sbjct: 124 ERHTPSLAAEEVKALLDEKADVVVLDARRFDEYQTMSIPGGTSVPGAELVLRVRELAPNP 183 Query: 190 NTRVIVNCAGRTRSIIGTQSLVNAGIPNPVHALRNGTIGWTLAGQELEHGNSRQFPVELT 249 TRVIVNCAGRTRSIIGTQSLVNAGIPNPV ALRNGTIGWTLAGQ LE G SR+FP E++ Sbjct: 184 RTRVIVNCAGRTRSIIGTQSLVNAGIPNPVAALRNGTIGWTLAGQRLEQGQSRRFP-EVS 242 Query: 250 AATRVQAAADALAVAERAGVXDGVVAGANGVGSLRARWRDRA 291 A R AA A AVA++AGV +A ARWR+ A Sbjct: 243 AENRAIAAQSARAVADKAGVGRAALADL-------ARWREEA 277 >ref|YP_004227777.1| Rhodanese domain-containing protein [Burkholderia sp. CCGE1001] gb|ADX54717.1| Rhodanese domain protein [Burkholderia sp. CCGE1001] Length = 533 Score = 364 bits (934), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 184/258 (71%), Positives = 212/258 (82%) Query: 12 TRNFQQVRDDLLARREIALLDVREEAPHAEAHPLFASNLSFSHLELLAYARIPRRDTAIV 71 TR++ VR LL R EIA +DVREE PHA +HPLFA+NL S LEL A R+PRRD IV Sbjct: 9 TRSYADVRRALLEREEIAFVDVREEDPHARSHPLFAANLPLSRLELDAPVRLPRRDVPIV 68 Query: 72 VLDDGEGLAQKATGRFVALGYSNVSVLDGGVAGWKAAGGELFQDVNVPSKSFGELVESKR 131 VLDDGEGLAQ+A RF +LGY++V++L+GG+ GW+ AGGELFQDVNVPSK+FGELVES R Sbjct: 69 VLDDGEGLAQRAAERFESLGYTDVALLEGGLQGWRKAGGELFQDVNVPSKAFGELVESVR 128 Query: 132 HTPSLSAPEVKALLDAKENVVVLDARRFDEYQNMNIPTSISVPGAELVLRVRELAPDPNT 191 HTPSL A +V+ALLD +ENVVVLDARRFDEYQ MNIP SISVPGAELVLR RELAPDP T Sbjct: 129 HTPSLPAQQVQALLDREENVVVLDARRFDEYQTMNIPGSISVPGAELVLRARELAPDPAT 188 Query: 192 RVIVNCAGRTRSIIGTQSLVNAGIPNPVHALRNGTIGWTLAGQELEHGNSRQFPVELTAA 251 R+IVNCAGRTRSIIG QSL+NAG+PNPV ALRNGTIGWTLAGQ L HG+SR+ + A Sbjct: 189 RIIVNCAGRTRSIIGAQSLINAGVPNPVAALRNGTIGWTLAGQPLAHGSSRRPDPVVDDA 248 Query: 252 TRVQAAADALAVAERAGV 269 R+ AA A +VA+RA V Sbjct: 249 LRLVAADGARSVADRAKV 266 >ref|ZP_02885725.1| Rhodanese domain protein [Burkholderia graminis C4D1M] gb|EDT08631.1| Rhodanese domain protein [Burkholderia graminis C4D1M] Length = 533 Score = 363 bits (933), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 186/258 (72%), Positives = 212/258 (82%) Query: 12 TRNFQQVRDDLLARREIALLDVREEAPHAEAHPLFASNLSFSHLELLAYARIPRRDTAIV 71 TR++ VR LL R EIAL+DVREE PHA +HPLFA+NL S LEL A R+PRRD IV Sbjct: 9 TRSYADVRRALLEREEIALVDVREEDPHARSHPLFAANLPLSRLELDAPVRLPRRDVPIV 68 Query: 72 VLDDGEGLAQKATGRFVALGYSNVSVLDGGVAGWKAAGGELFQDVNVPSKSFGELVESKR 131 VLDDGEGLA +A RF +LGYS+V++L+GG+ GW+ AGGELFQDVNVPSK+FGELVES R Sbjct: 69 VLDDGEGLAARAAERFESLGYSDVALLEGGLQGWRKAGGELFQDVNVPSKAFGELVESVR 128 Query: 132 HTPSLSAPEVKALLDAKENVVVLDARRFDEYQNMNIPTSISVPGAELVLRVRELAPDPNT 191 HTPSL A +V+ALLD +ENVVVLDARRFDEYQ MNIP SISVPGAELVLR RELAPDP T Sbjct: 129 HTPSLPAQQVQALLDREENVVVLDARRFDEYQTMNIPGSISVPGAELVLRARELAPDPAT 188 Query: 192 RVIVNCAGRTRSIIGTQSLVNAGIPNPVHALRNGTIGWTLAGQELEHGNSRQFPVELTAA 251 R+IVNCAGRTRSIIG QSL+NAG+PNPV ALRNGTIGWTLAGQ L HG+SR+ + A Sbjct: 189 RIIVNCAGRTRSIIGAQSLINAGLPNPVAALRNGTIGWTLAGQPLAHGSSRRPGPVVDDA 248 Query: 252 TRVQAAADALAVAERAGV 269 R+ AA A AVA+RA V Sbjct: 249 LRLIAADGARAVADRAKV 266 >ref|YP_001668747.1| rhodanese domain-containing protein [Pseudomonas putida GB-1] gb|ABY98411.1| Rhodanese domain protein [Pseudomonas putida GB-1] Length = 528 Score = 363 bits (933), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 185/260 (71%), Positives = 212/260 (81%), Gaps = 1/260 (0%) Query: 10 VDTRNFQQVRDDLLARREIALLDVREEAPHAEAHPLFASNLSFSHLELLAYARIPRRDTA 69 V TR++ +R LLA E+AL+DVREE P A+AHPLFA+NL S LEL +AR+PRRDT Sbjct: 4 VATRSYHAIRQALLAHEELALIDVREEDPFAQAHPLFAANLPLSKLELEIFARVPRRDTP 63 Query: 70 IVVLDDGEGLAQKATGRFVALGYSNVSVLDGGVAGWKAAGGELFQDVNVPSKSFGELVES 129 + V DDGEGL A R VALGYS+V+VL+GG+AGW+AAGGELF+DVNVPSK+FGELVES Sbjct: 64 LTVYDDGEGLVALAAERLVALGYSDVAVLEGGLAGWRAAGGELFRDVNVPSKAFGELVES 123 Query: 130 KRHTPSLSAPEVKALLDAKENVVVLDARRFDEYQNMNIPTSISVPGAELVLRVRELAPDP 189 RHTPSL+A V+ALLDAK +VVVLDARRFDEYQ M+IP ISVPGAELVLRV ELAP P Sbjct: 124 VRHTPSLAAEHVQALLDAKADVVVLDARRFDEYQTMSIPGGISVPGAELVLRVAELAPSP 183 Query: 190 NTRVIVNCAGRTRSIIGTQSLVNAGIPNPVHALRNGTIGWTLAGQELEHGNSRQFPVELT 249 T+VIVNCAGRTRSIIGTQSLVNAGIPNPV ALRNGTIGWTLAGQ L HG R+F ++ Sbjct: 184 ATQVIVNCAGRTRSIIGTQSLVNAGIPNPVAALRNGTIGWTLAGQTLAHGQERRF-AAVS 242 Query: 250 AATRVQAAADALAVAERAGV 269 TR+ AA A VA+RAGV Sbjct: 243 DTTRIDAAQRARHVADRAGV 262 >ref|YP_004752721.1| Rhodanese-like sulfurtransferase [Collimonas fungivorans Ter331] gb|AEK61898.1| Rhodanese-like sulfurtransferase [Collimonas fungivorans Ter331] Length = 538 Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 182/260 (70%), Positives = 209/260 (80%), Gaps = 4/260 (1%) Query: 14 NFQQVRDDLLARREIALLDVREEAPHAEAHPLFASNLSFSHLELLAYARIPRRDTAIVVL 73 +FQQ+ LL R+E+ALLDVREEAP AEAHPLFA+NL +EL AYARIPRRDT I V Sbjct: 13 SFQQIHAALLERKELALLDVREEAPFAEAHPLFAANLPLGRIELEAYARIPRRDTVIAVY 72 Query: 74 DDGEGLAQKATGRFVALGYSNVSVLDGGVAGWKAAGGELFQDVNVPSKSFGELVESKRHT 133 DDGEGLAQ A R + LGYS V +L GG+ GW+ AGGE+F+DVN PSK+FGELVES+RHT Sbjct: 73 DDGEGLAQPAAQRLLQLGYSAVHLLAGGLQGWRDAGGEIFRDVNAPSKAFGELVESQRHT 132 Query: 134 PSLSAPEVKALLDAKENVVVLDARRFDEYQNMNIPTSISVPGAELVLRVRELAPDPNTRV 193 PSLSAPEVKALLDA +VVVLDARR+DEY M+IP S+SVPGAELVLRVR LAP P TRV Sbjct: 133 PSLSAPEVKALLDADADVVVLDARRYDEYNTMSIPGSVSVPGAELVLRVRALAPRPETRV 192 Query: 194 IVNCAGRTRSIIGTQSLVNAGIPNPVHALRNGTIGWTLAGQELEHGNSRQFPVELT---- 249 IVNCAGRTRSIIG+QSL+NAGIPNPV ALRNGTIGWTLAGQ+LEHG +++F Sbjct: 193 IVNCAGRTRSIIGSQSLINAGIPNPVSALRNGTIGWTLAGQQLEHGKTQRFAERSLDPSG 252 Query: 250 AATRVQAAADALAVAERAGV 269 + VQAA + VA+RA V Sbjct: 253 SEHHVQAAKASRQVADRAKV 272