BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0500.p (301 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001100760.1| hypothetical protein HEAR2513 [Herminiimonas... 489 e-136 ref|YP_001354292.1| hypothetical protein mma_2602 [Janthinobacte... 489 e-136 ref|YP_003777515.1| SAM-dependent methyltransferase [Herbaspiril... 486 e-135 ref|YP_004755010.1| SAM-dependent methyltransferase [Collimonas ... 479 e-133 ref|YP_583026.1| hypothetical protein Rmet_0871 [Cupriavidus met... 464 e-128 >ref|YP_001100760.1| hypothetical protein HEAR2513 [Herminiimonas arsenicoxydans] emb|CAL62639.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 293 Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust. Identities = 226/269 (84%), Positives = 252/269 (93%) Query: 31 EIRPGQSVELLKELHILTRDGKLNQDSRRKLKQVYHLYQFIEPLLQEIRNTHPDVSVVDH 90 EIRPGQS+ELLKELHILTRDGKLNQDSRRKLKQVYHLYQFIEPLLQEI+N HPD+++ DH Sbjct: 18 EIRPGQSIELLKELHILTRDGKLNQDSRRKLKQVYHLYQFIEPLLQEIQNDHPDITLADH 77 Query: 91 GAGKSYLGFILYDLFFKALEGNSRIYGIETREELVQKSTALAKRLGFPGMSFLNLSVADS 150 GAGKSYLGFILYDLFFK + NSRIYGIETR+ELVQKS ALAK+L FPGMSFLNLSVA+S Sbjct: 78 GAGKSYLGFILYDLFFKERKDNSRIYGIETRDELVQKSEALAKKLDFPGMSFLNLSVAES 137 Query: 151 IGSTALPEQIDVVTALHACDTATDDAIHFALKKHAQFIVLVPCCQAEVASVLNRNKGASL 210 I S LPE+ID+VTALHAC+TATDDAIHFAL+K A+FIVLVPCCQAEVASVL +NKG +L Sbjct: 138 ITSDRLPEKIDIVTALHACNTATDDAIHFALQKQAKFIVLVPCCQAEVASVLKKNKGKTL 197 Query: 211 GRTSLTELWRHPLHTREFGSQVTNVLRCLQLEAHGYQVSVTELVGWEHSMKNELIIARYK 270 +++LTE+WRHPLHTREFGSQVTNVLRCLQLEAHGYQV+VTELVGWEHSMKNELIIA Y+ Sbjct: 198 AKSALTEIWRHPLHTREFGSQVTNVLRCLQLEAHGYQVNVTELVGWEHSMKNELIIASYR 257 Query: 271 DLPRKRPTERLQDVLQSLGLEEMGERFFS 299 DLPRKRP+ERLQ+VLQ+LGLEEM RFF+ Sbjct: 258 DLPRKRPSERLQEVLQTLGLEEMQTRFFT 286 >ref|YP_001354292.1| hypothetical protein mma_2602 [Janthinobacterium sp. Marseille] gb|ABR90747.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 280 Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust. Identities = 228/269 (84%), Positives = 252/269 (93%) Query: 31 EIRPGQSVELLKELHILTRDGKLNQDSRRKLKQVYHLYQFIEPLLQEIRNTHPDVSVVDH 90 EIRPGQS+ELLKELHILTRDGKLNQDSRRKLKQVYHLYQFIEPLLQEI+N HPD+++ DH Sbjct: 6 EIRPGQSIELLKELHILTRDGKLNQDSRRKLKQVYHLYQFIEPLLQEIQNDHPDITLADH 65 Query: 91 GAGKSYLGFILYDLFFKALEGNSRIYGIETREELVQKSTALAKRLGFPGMSFLNLSVADS 150 GAGKSYLGFILYDLFFK + NSRIYGIETR+ELVQKS ALA++L FPGMSFLNLSVA+S Sbjct: 66 GAGKSYLGFILYDLFFKERKDNSRIYGIETRDELVQKSEALAQKLDFPGMSFLNLSVAES 125 Query: 151 IGSTALPEQIDVVTALHACDTATDDAIHFALKKHAQFIVLVPCCQAEVASVLNRNKGASL 210 I S LPE+IDVVTALHAC+TATDDAIHFALKK A+FIVLVPCCQAEVASVL +NKG +L Sbjct: 126 ITSDLLPEKIDVVTALHACNTATDDAIHFALKKQAKFIVLVPCCQAEVASVLKKNKGKTL 185 Query: 211 GRTSLTELWRHPLHTREFGSQVTNVLRCLQLEAHGYQVSVTELVGWEHSMKNELIIARYK 270 +++LTE+WRHPLHTREFGSQVTNVLRCLQLEAHGYQV+VTELVGWEHSMKNELIIA YK Sbjct: 186 AKSALTEIWRHPLHTREFGSQVTNVLRCLQLEAHGYQVNVTELVGWEHSMKNELIIASYK 245 Query: 271 DLPRKRPTERLQDVLQSLGLEEMGERFFS 299 DLPR+RPTERLQ+VLQ+LGLEEM RFF+ Sbjct: 246 DLPRRRPTERLQEVLQTLGLEEMQPRFFT 274 >ref|YP_003777515.1| SAM-dependent methyltransferase [Herbaspirillum seropedicae SmR1] gb|ADJ65607.1| SAM-dependent methyltransferase protein [Herbaspirillum seropedicae SmR1] Length = 299 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 237/300 (79%), Positives = 257/300 (85%), Gaps = 4/300 (1%) Query: 1 MSSKKHNKPAAAPATAAAGSSGASPVATIPEIRPGQSVELLKELHILTRDGKLNQDSRRK 60 MS + + P P G A EIRPGQS+ELLKELHILTRDGKLNQDSRRK Sbjct: 1 MSKQAPSAPGRQPNR---GKPAAESAPQAHEIRPGQSIELLKELHILTRDGKLNQDSRRK 57 Query: 61 LKQVYHLYQFIEPLLQEIRNTHPDVSVVDHGAGKSYLGFILYDLFFKALEGNSRIYGIET 120 LKQVYHLYQFIEPLLQE+ HPDVS+VDHGAGKSYLGFILYDLFFK L G IYGIET Sbjct: 58 LKQVYHLYQFIEPLLQEVLEQHPDVSLVDHGAGKSYLGFILYDLFFKGLPGAPHIYGIET 117 Query: 121 REELVQKSTALAKRLGFPGMSFLNLSVADSIGSTALPEQIDVVTALHACDTATDDAIHFA 180 REELV+KS LA RLGF GMSFLNLSVADSI S +LPE+IDVVTALHACDTATDDAIHFA Sbjct: 118 REELVRKSEELASRLGFGGMSFLNLSVADSISSPSLPEKIDVVTALHACDTATDDAIHFA 177 Query: 181 LKKHAQFIVLVPCCQAEVASVLNRNKGASLGRTSLTELWRHPLHTREFGSQVTNVLRCLQ 240 L K A+FIVLVPCCQAEVASVLNRNKG SL SLTE+WRHPLHTREFGSQVTNVLRCLQ Sbjct: 178 LAKEARFIVLVPCCQAEVASVLNRNKGKSLA-NSLTEIWRHPLHTREFGSQVTNVLRCLQ 236 Query: 241 LEAHGYQVSVTELVGWEHSMKNELIIARYKDLPRKRPTERLQDVLQSLGLEEMGERFFST 300 LEAHGY+VSVTELVGWEHSMKNELIIA+Y+DLPR+RP ERLQ+VL++LGLEEMG+RFF++ Sbjct: 237 LEAHGYKVSVTELVGWEHSMKNELIIAQYRDLPRRRPAERLQEVLRTLGLEEMGQRFFAS 296 >ref|YP_004755010.1| SAM-dependent methyltransferase [Collimonas fungivorans Ter331] gb|AEK64187.1| SAM-dependent methyltransferase [Collimonas fungivorans Ter331] Length = 316 Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust. Identities = 229/280 (81%), Positives = 250/280 (89%) Query: 20 SSGASPVATIPEIRPGQSVELLKELHILTRDGKLNQDSRRKLKQVYHLYQFIEPLLQEIR 79 S+ +P A+ EIRPGQS+ELLKELHILTRDGKLNQDSRRKLKQVYHLYQFIEPLLQEI+ Sbjct: 35 SNSTNPQASKHEIRPGQSIELLKELHILTRDGKLNQDSRRKLKQVYHLYQFIEPLLQEIQ 94 Query: 80 NTHPDVSVVDHGAGKSYLGFILYDLFFKALEGNSRIYGIETREELVQKSTALAKRLGFPG 139 V +VDHGAGKSYLGFILYDLFFKAL NS I+GIETREELV+KS LA+RL FPG Sbjct: 95 QEQGGVQLVDHGAGKSYLGFILYDLFFKALTDNSHIFGIETREELVKKSQELAQRLEFPG 154 Query: 140 MSFLNLSVADSIGSTALPEQIDVVTALHACDTATDDAIHFALKKHAQFIVLVPCCQAEVA 199 MSFLNLSVA+SIGS LP +IDVVTALHAC+TATDDAI F LKK A+F+VLVPCCQAEVA Sbjct: 155 MSFLNLSVAESIGSALLPGRIDVVTALHACNTATDDAIEFGLKKQARFMVLVPCCQAEVA 214 Query: 200 SVLNRNKGASLGRTSLTELWRHPLHTREFGSQVTNVLRCLQLEAHGYQVSVTELVGWEHS 259 SVL +NKG SL + +LTE+WRHPLHTREFGSQVTNVLRCLQLEAHGYQVSVTELVGWEHS Sbjct: 215 SVLKKNKGKSLAKEALTEIWRHPLHTREFGSQVTNVLRCLQLEAHGYQVSVTELVGWEHS 274 Query: 260 MKNELIIARYKDLPRKRPTERLQDVLQSLGLEEMGERFFS 299 MKNELIIA YKDLPRKRPTERLQ+VL +LGLEEM ERFF+ Sbjct: 275 MKNELIIASYKDLPRKRPTERLQEVLHTLGLEEMQERFFT 314 >ref|YP_583026.1| hypothetical protein Rmet_0871 [Cupriavidus metallidurans CH34] gb|ABF07757.1| conserved hypothetical protein [Cupriavidus metallidurans CH34] Length = 285 Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust. Identities = 221/279 (79%), Positives = 248/279 (88%) Query: 22 GASPVATIPEIRPGQSVELLKELHILTRDGKLNQDSRRKLKQVYHLYQFIEPLLQEIRNT 81 G +P+++ E+RPGQS+ELLKELHILTRDGK+NQDSRRKLKQVYHLYQFIEPLL+E+++ Sbjct: 6 GTTPMSSTYEVRPGQSIELLKELHILTRDGKMNQDSRRKLKQVYHLYQFIEPLLREVKDE 65 Query: 82 HPDVSVVDHGAGKSYLGFILYDLFFKALEGNSRIYGIETREELVQKSTALAKRLGFPGMS 141 VS+VDHGAGKSYLGFIL+DLFFK L+ +S IYGIETREELV S ALA RLGF GMS Sbjct: 66 KGTVSLVDHGAGKSYLGFILFDLFFKDLKDSSHIYGIETREELVTSSKALASRLGFGGMS 125 Query: 142 FLNLSVADSIGSTALPEQIDVVTALHACDTATDDAIHFALKKHAQFIVLVPCCQAEVASV 201 FLNLSVADSI S ALP+ IDVVTALHAC+TATDDAIHFAL K A+ IVLVPCCQAEVASV Sbjct: 126 FLNLSVADSITSPALPQTIDVVTALHACNTATDDAIHFALAKQARHIVLVPCCQAEVASV 185 Query: 202 LNRNKGASLGRTSLTELWRHPLHTREFGSQVTNVLRCLQLEAHGYQVSVTELVGWEHSMK 261 L ++KG L LTE+WRHPLHTREFGSQVTNVLRCLQLEAHGYQVSVTELVGWEHSMK Sbjct: 186 LRKHKGKLLAGNPLTEIWRHPLHTREFGSQVTNVLRCLQLEAHGYQVSVTELVGWEHSMK 245 Query: 262 NELIIARYKDLPRKRPTERLQDVLQSLGLEEMGERFFST 300 NELIIA+YKDLPR+RP ERL +VL+SLGLEE+ ERFF+T Sbjct: 246 NELIIAQYKDLPRRRPAERLHNVLESLGLEELNERFFTT 284