BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0499.p (363 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001354821.1| hypothetical protein mma_3131 [Janthinobacte... 678 0.0 ref|YP_004751266.1| GTP-binding and nucleic acid-binding protein... 677 0.0 ref|YP_003777458.1| GTP-binding protein [Herbaspirillum seropedi... 672 0.0 ref|YP_001101131.1| GTP-binding protein [Herminiimonas arsenicox... 670 0.0 ref|ZP_08274862.1| GTP-binding and nucleic acid-binding protein ... 652 0.0 >ref|YP_001354821.1| hypothetical protein mma_3131 [Janthinobacterium sp. Marseille] gb|ABR89477.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 363 Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/363 (90%), Positives = 346/363 (95%) Query: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGMVEVPDPRLQALAEIVKP 60 MSLKCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGMVEVPDPRLQALAEIVKP Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGMVEVPDPRLQALAEIVKP 60 Query: 61 ERILSATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGKVS 120 ERIL ATVEFVDIAGLVAGASKGEGLGNQFL+HIRETDAIVNVVRCFED NVIHVAGK++ Sbjct: 61 ERILPATVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDDNVIHVAGKIN 120 Query: 121 PLDDIAVIQTELALADMGTVEKAIHREQKKARSGDKDAAKLVALLERIMPALDDAQPVRA 180 PLDDI VIQTELALADMGTVEKAIHRE KKARSGDKDA+KLVALLERIMP LD+A+PVRA Sbjct: 121 PLDDIEVIQTELALADMGTVEKAIHRENKKARSGDKDASKLVALLERIMPHLDEAKPVRA 180 Query: 181 LGLDAEEMALIKPLCLITAKPAMYVANVSDTGFTDNPLLDLLTKYAAEQGAPIVAICASI 240 +GLD EEM LIKPLCLITAKPAMYV NVSD+GFTDNPLLD LT YA Q AP+VAICA+I Sbjct: 181 MGLDKEEMELIKPLCLITAKPAMYVGNVSDSGFTDNPLLDQLTAYAKSQNAPVVAICAAI 240 Query: 241 ESEIADLDDADKAEFLADMGMEEPGLDRLIRAAFKLLGLQTYFTAGVKEVRAWTVPVGAT 300 ESEIADL++ADK EFLADMGMEEPGLDRLIRA FKLLGLQ+YFTAGVKEVRAWT+PVGAT Sbjct: 241 ESEIADLEEADKKEFLADMGMEEPGLDRLIRAGFKLLGLQSYFTAGVKEVRAWTIPVGAT 300 Query: 301 GPQAAGVIHTDFERGFIRAQTIAYEDFIAYKGENGAKEAGKMRAEGKEYVVRDGDVMNFL 360 PQAAGVIHTDFERGFIRAQTI+YED+I YKGENGAKEAGKMRAEGKEY+V+DGDV+NFL Sbjct: 301 APQAAGVIHTDFERGFIRAQTISYEDYITYKGENGAKEAGKMRAEGKEYIVKDGDVLNFL 360 Query: 361 FNV 363 FNV Sbjct: 361 FNV 363 >ref|YP_004751266.1| GTP-binding and nucleic acid-binding protein [Collimonas fungivorans Ter331] gb|AEK60443.1| GTP-binding and nucleic acid-binding protein [Collimonas fungivorans Ter331] Length = 363 Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/363 (91%), Positives = 347/363 (95%) Query: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGMVEVPDPRLQALAEIVKP 60 MSLKCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGMVEVPDPRL+ALAEIVKP Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGMVEVPDPRLKALAEIVKP 60 Query: 61 ERILSATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGKVS 120 ERIL ATVEFVDIAGLVAGASKGEGLGNQFL+HIRETDAIVNVVRCFED NVIHVAGK++ Sbjct: 61 ERILPATVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDDNVIHVAGKIN 120 Query: 121 PLDDIAVIQTELALADMGTVEKAIHREQKKARSGDKDAAKLVALLERIMPALDDAQPVRA 180 PLDDI VIQTELALADMGTVEKAIHRE KKARSGDKDAAKLVALLER+MP LD A+PVRA Sbjct: 121 PLDDIDVIQTELALADMGTVEKAIHRENKKARSGDKDAAKLVALLERLMPELDQAKPVRA 180 Query: 181 LGLDAEEMALIKPLCLITAKPAMYVANVSDTGFTDNPLLDLLTKYAAEQGAPIVAICASI 240 GLDAEEMALIKPLCLITAKPAMYVANVSD GFT+NPLLD LT YAA Q APIVAICA+I Sbjct: 181 CGLDAEEMALIKPLCLITAKPAMYVANVSDHGFTNNPLLDQLTAYAASQNAPIVAICAAI 240 Query: 241 ESEIADLDDADKAEFLADMGMEEPGLDRLIRAAFKLLGLQTYFTAGVKEVRAWTVPVGAT 300 ESEIADLD+ADK EFLADMGMEEPGLDRLIRAAFKLLGLQTYFTAGVKEVRAWT+ VG T Sbjct: 241 ESEIADLDEADKHEFLADMGMEEPGLDRLIRAAFKLLGLQTYFTAGVKEVRAWTIHVGDT 300 Query: 301 GPQAAGVIHTDFERGFIRAQTIAYEDFIAYKGENGAKEAGKMRAEGKEYVVRDGDVMNFL 360 GPQAAGVIHTDFERGFIRAQTIAY+DFI++KGE GAKEAGKMRAEGKEYVV+DGDV+NFL Sbjct: 301 GPQAAGVIHTDFERGFIRAQTIAYDDFISHKGEQGAKEAGKMRAEGKEYVVKDGDVLNFL 360 Query: 361 FNV 363 FNV Sbjct: 361 FNV 363 >ref|YP_003777458.1| GTP-binding protein [Herbaspirillum seropedicae SmR1] gb|ADJ65550.1| GTP-binding protein [Herbaspirillum seropedicae SmR1] Length = 364 Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/362 (93%), Positives = 353/362 (97%) Query: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGMVEVPDPRLQALAEIVKP 60 MSLKCGIVGLPNVGKSTLFNALTKAGI AENYPFCTIEPNVG+VEVPDPRL+ALAEIVKP Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDPRLKALAEIVKP 60 Query: 61 ERILSATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGKVS 120 ERIL ATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAG+VS Sbjct: 61 ERILPATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGRVS 120 Query: 121 PLDDIAVIQTELALADMGTVEKAIHREQKKARSGDKDAAKLVALLERIMPALDDAQPVRA 180 PLDDIAVIQTELALADMGTVEKAIHREQKKARSGDKDAAKLVALLERIMPALD+A+PVRA Sbjct: 121 PLDDIAVIQTELALADMGTVEKAIHREQKKARSGDKDAAKLVALLERIMPALDEAKPVRA 180 Query: 181 LGLDAEEMALIKPLCLITAKPAMYVANVSDTGFTDNPLLDLLTKYAAEQGAPIVAICASI 240 LGLDAEEM LIKPLCLITAKPAMYVANVSD+GFTDNPLLD LT YA EQ APIVAICA+I Sbjct: 181 LGLDAEEMLLIKPLCLITAKPAMYVANVSDSGFTDNPLLDQLTAYAKEQNAPIVAICAAI 240 Query: 241 ESEIADLDDADKAEFLADMGMEEPGLDRLIRAAFKLLGLQTYFTAGVKEVRAWTVPVGAT 300 E+EIADLDDADKA+FLADMGMEEPGLDRLIRAAF+LLGLQTYFTAGVKEVRAWTVPVGAT Sbjct: 241 EAEIADLDDADKADFLADMGMEEPGLDRLIRAAFRLLGLQTYFTAGVKEVRAWTVPVGAT 300 Query: 301 GPQAAGVIHTDFERGFIRAQTIAYEDFIAYKGENGAKEAGKMRAEGKEYVVRDGDVMNFL 360 GPQAAGVIHTDFERGFIRAQTIA+EDFIA+KGE GAKEAGKMRAEGKEYVV+DGDVMNFL Sbjct: 301 GPQAAGVIHTDFERGFIRAQTIAFEDFIAFKGEAGAKEAGKMRAEGKEYVVKDGDVMNFL 360 Query: 361 FN 362 F Sbjct: 361 FT 362 >ref|YP_001101131.1| GTP-binding protein [Herminiimonas arsenicoxydans] emb|CAL63010.1| GTP-dependent nucleic acid-binding protein EngD [Herminiimonas arsenicoxydans] Length = 363 Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust. Identities = 324/363 (89%), Positives = 344/363 (94%) Query: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGMVEVPDPRLQALAEIVKP 60 MSLKCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGMVEVPDPRLQALAEIVKP Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGMVEVPDPRLQALAEIVKP 60 Query: 61 ERILSATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGKVS 120 ERIL ATVEFVDIAGLVAGASKGEGLGNQFL+HIRETDAIVNVVRCFED NVIHVAGK++ Sbjct: 61 ERILPATVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDDNVIHVAGKIN 120 Query: 121 PLDDIAVIQTELALADMGTVEKAIHREQKKARSGDKDAAKLVALLERIMPALDDAQPVRA 180 PLDDI VIQTELALADMGTVEKAIHRE KKARSGDKDA KLVALLERIMP LD+A+PVRA Sbjct: 121 PLDDIEVIQTELALADMGTVEKAIHRENKKARSGDKDAGKLVALLERIMPHLDEAKPVRA 180 Query: 181 LGLDAEEMALIKPLCLITAKPAMYVANVSDTGFTDNPLLDLLTKYAAEQGAPIVAICASI 240 +GLD EEM LIKPLCLITAKPAMYV NVSD+GFT+NPLLD LT+YA Q AP+VAICA+I Sbjct: 181 MGLDKEEMELIKPLCLITAKPAMYVGNVSDSGFTNNPLLDQLTEYAKSQNAPVVAICAAI 240 Query: 241 ESEIADLDDADKAEFLADMGMEEPGLDRLIRAAFKLLGLQTYFTAGVKEVRAWTVPVGAT 300 ESEIA+LD+ADK EFLADMGMEEPGLDRLIRA FKLLGLQ+YFTAGVKEVRAWT+ VG T Sbjct: 241 ESEIAELDEADKKEFLADMGMEEPGLDRLIRAGFKLLGLQSYFTAGVKEVRAWTIHVGDT 300 Query: 301 GPQAAGVIHTDFERGFIRAQTIAYEDFIAYKGENGAKEAGKMRAEGKEYVVRDGDVMNFL 360 GPQAAGVIHTDFERG+IRAQTIAYEDFI +KGE GAKEAGKMRAEGKEY+V+DGDV+NFL Sbjct: 301 GPQAAGVIHTDFERGYIRAQTIAYEDFIKFKGEQGAKEAGKMRAEGKEYIVKDGDVLNFL 360 Query: 361 FNV 363 FNV Sbjct: 361 FNV 363 >ref|ZP_08274862.1| GTP-binding and nucleic acid-binding protein YchF [Oxalobacteraceae bacterium IMCC9480] gb|EGF31666.1| GTP-binding and nucleic acid-binding protein YchF [Oxalobacteraceae bacterium IMCC9480] Length = 363 Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust. Identities = 315/363 (86%), Positives = 339/363 (93%) Query: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGMVEVPDPRLQALAEIVKP 60 MSLKCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGMVEVPDPR+ AL+EIVKP Sbjct: 1 MSLKCGIVGLPNVGKSTLFNALTKAGIPAENYPFCTIEPNVGMVEVPDPRMDALSEIVKP 60 Query: 61 ERILSATVEFVDIAGLVAGASKGEGLGNQFLSHIRETDAIVNVVRCFEDPNVIHVAGKVS 120 +R + TVEFVDIAGLVAGASKGEGLGNQFL+HIRETDAIVNVVRCFED NVIHVAG+++ Sbjct: 61 QRAVPTTVEFVDIAGLVAGASKGEGLGNQFLAHIRETDAIVNVVRCFEDDNVIHVAGRIN 120 Query: 121 PLDDIAVIQTELALADMGTVEKAIHREQKKARSGDKDAAKLVALLERIMPALDDAQPVRA 180 PLDDI VIQTELALADM VEKAIHRE KKARSGDKDAAKLV +LERIMP LD A PVRA Sbjct: 121 PLDDIEVIQTELALADMAAVEKAIHRESKKARSGDKDAAKLVVILERIMPQLDLALPVRA 180 Query: 181 LGLDAEEMALIKPLCLITAKPAMYVANVSDTGFTDNPLLDLLTKYAAEQGAPIVAICASI 240 +GLDAEEMALIKPLCLITAKPAMYV NVSDTGFT+NPLLD LT+YA +Q AP+VAICA+I Sbjct: 181 MGLDAEEMALIKPLCLITAKPAMYVGNVSDTGFTNNPLLDQLTEYAKKQNAPVVAICAAI 240 Query: 241 ESEIADLDDADKAEFLADMGMEEPGLDRLIRAAFKLLGLQTYFTAGVKEVRAWTVPVGAT 300 ESEI+DL+DADKAEFLADMGM EPGLDRLIR+A+ LLGLQTYFTAGVKEVRAWT+ VG T Sbjct: 241 ESEISDLEDADKAEFLADMGMTEPGLDRLIRSAYTLLGLQTYFTAGVKEVRAWTIHVGDT 300 Query: 301 GPQAAGVIHTDFERGFIRAQTIAYEDFIAYKGENGAKEAGKMRAEGKEYVVRDGDVMNFL 360 PQAAGVIHTDFERGFIRAQTIAYEDFI +KGE GAK+AGKMRAEGKEYVV+DGDV+NFL Sbjct: 301 APQAAGVIHTDFERGFIRAQTIAYEDFITFKGEAGAKDAGKMRAEGKEYVVKDGDVLNFL 360 Query: 361 FNV 363 FNV Sbjct: 361 FNV 363