BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0489.p (254 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777450.1| multidrug ABC transporter permease [Herbaspi... 467 e-130 ref|YP_004751171.1| multidrug ABC transporter permease [Collimon... 425 e-117 ref|YP_001354982.1| ABC-2 type transporter protein [Janthinobact... 424 e-117 ref|YP_001101303.1| ABC transporter membrane protein [Herminiimo... 417 e-114 ref|YP_560591.1| ABC multidrug efflux pump, inner membrane subun... 391 e-107 >ref|YP_003777450.1| multidrug ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ65542.1| ABC-type multidrug transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 254 Score = 467 bits (1201), Expect = e-130, Method: Compositional matrix adjust. Identities = 230/254 (90%), Positives = 243/254 (95%) Query: 1 MTGFQTLFYKEVLRFWKVATQTVTAPIMTAMLYLLIFGHVLQDRVQVYPGVQYTGFLVPG 60 M GF+TLFYKE+LRFWKVATQT+TAPI+TA+LYLLIFGHVLQDRVQVYPGV YTGFLVPG Sbjct: 1 MIGFRTLFYKEILRFWKVATQTITAPIVTALLYLLIFGHVLQDRVQVYPGVNYTGFLVPG 60 Query: 61 LVMMSVLQNAFANSSSSLIQSKITGNLVFVLLTPLSHWEMFGGYVLAAVVRGLIVGAGVF 120 LVMMSVLQNAFANSSSSLIQSKITGNLVFVLLTPLSHWE+FGGYVLAAVVRGL+VGAGVF Sbjct: 61 LVMMSVLQNAFANSSSSLIQSKITGNLVFVLLTPLSHWELFGGYVLAAVVRGLMVGAGVF 120 Query: 121 VVTAWFGHLSFVAPWWIVIFALLGAAILGTMGLVAGIWAEKFDQLAAFQNFLIVPLTFLA 180 VVT WFGHL FVAP WI++FALLGA ILGTMGL+AGIWAEKFDQLAAFQNFLIVPLTFLA Sbjct: 121 VVTVWFGHLDFVAPLWILVFALLGAGILGTMGLIAGIWAEKFDQLAAFQNFLIVPLTFLA 180 Query: 181 GVFYSIHSLPPFWQTVSHFNPFFYMIDGFRYGFFGQSDINPFISLAIVSVFFIALSTLAV 240 GVFYSIHSLPPFWQ VSHFNPFFYMIDGFRYGFFGQSDI P SL IV+VFF+ALSTLAV Sbjct: 181 GVFYSIHSLPPFWQAVSHFNPFFYMIDGFRYGFFGQSDIAPMTSLGIVAVFFVALSTLAV 240 Query: 241 RMLKSGYKLRAGAH 254 RMLKSGYKLRAG+H Sbjct: 241 RMLKSGYKLRAGSH 254 >ref|YP_004751171.1| multidrug ABC transporter permease [Collimonas fungivorans Ter331] gb|AEK60348.1| ABC-type multidrug transport system, permease component [Collimonas fungivorans Ter331] Length = 252 Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust. Identities = 204/250 (81%), Positives = 227/250 (90%) Query: 1 MTGFQTLFYKEVLRFWKVATQTVTAPIMTAMLYLLIFGHVLQDRVQVYPGVQYTGFLVPG 60 M GFQTLFYKEVLRFWKVATQT+ API+TAMLYLLIFGH L+D ++VYPGVQYT FL+PG Sbjct: 2 MIGFQTLFYKEVLRFWKVATQTIGAPILTAMLYLLIFGHTLKDHIEVYPGVQYTAFLIPG 61 Query: 61 LVMMSVLQNAFANSSSSLIQSKITGNLVFVLLTPLSHWEMFGGYVLAAVVRGLIVGAGVF 120 LVMMSVLQNAFAN+SSSL QSK+TGNLVFVLLTPLSHWE++G YVLA+VVRG+ VG GVF Sbjct: 62 LVMMSVLQNAFANTSSSLTQSKMTGNLVFVLLTPLSHWELYGAYVLASVVRGVAVGLGVF 121 Query: 121 VVTAWFGHLSFVAPWWIVIFALLGAAILGTMGLVAGIWAEKFDQLAAFQNFLIVPLTFLA 180 V+TAWFG+LSFVAPWWIVIFA LGAA+LGTMGL+AG+WA+KFDQLA FQNFLI+P TFLA Sbjct: 122 VITAWFGNLSFVAPWWIVIFAFLGAALLGTMGLIAGVWADKFDQLAVFQNFLIMPATFLA 181 Query: 181 GVFYSIHSLPPFWQTVSHFNPFFYMIDGFRYGFFGQSDINPFISLAIVSVFFIALSTLAV 240 GVFYSI SLPPFWQ VSH NPFFYMIDGFRYGFFGQSDINP ISL I+ +F LS +AV Sbjct: 182 GVFYSIKSLPPFWQAVSHLNPFFYMIDGFRYGFFGQSDINPLISLLIICIFLALLSAVAV 241 Query: 241 RMLKSGYKLR 250 +MLK GYKLR Sbjct: 242 QMLKRGYKLR 251 >ref|YP_001354982.1| ABC-2 type transporter protein [Janthinobacterium sp. Marseille] gb|ABR90787.1| ABC-2 type transporter protein [Janthinobacterium sp. Marseille] Length = 251 Score = 424 bits (1091), Expect = e-117, Method: Compositional matrix adjust. Identities = 202/250 (80%), Positives = 229/250 (91%) Query: 1 MTGFQTLFYKEVLRFWKVATQTVTAPIMTAMLYLLIFGHVLQDRVQVYPGVQYTGFLVPG 60 M GFQTLFYKE+LRFWKVATQTV API+TA+LYLLIFGHVL+D VQVYPGV+YT FL+PG Sbjct: 1 MIGFQTLFYKEMLRFWKVATQTVAAPILTAVLYLLIFGHVLEDHVQVYPGVKYTAFLIPG 60 Query: 61 LVMMSVLQNAFANSSSSLIQSKITGNLVFVLLTPLSHWEMFGGYVLAAVVRGLIVGAGVF 120 LVMMSVLQNAFANSSSSLIQSKITGNLVFVLL PLSHWE+F YV+AAVVRGL+VG GVF Sbjct: 61 LVMMSVLQNAFANSSSSLIQSKITGNLVFVLLPPLSHWELFSAYVMAAVVRGLVVGTGVF 120 Query: 121 VVTAWFGHLSFVAPWWIVIFALLGAAILGTMGLVAGIWAEKFDQLAAFQNFLIVPLTFLA 180 +VTAWF +SFVAPWWI+IFA+LGAA+LGTMGL+AGIWAEKFDQLAAFQNFLI+P TFL+ Sbjct: 121 IVTAWFADMSFVAPWWILIFAILGAAMLGTMGLIAGIWAEKFDQLAAFQNFLIMPATFLS 180 Query: 181 GVFYSIHSLPPFWQTVSHFNPFFYMIDGFRYGFFGQSDINPFISLAIVSVFFIALSTLAV 240 GVFYS+HSLPPFWQTVSH NPFFYMIDGFRYGFFGQSD+NP +S +V+ F + L+ + + Sbjct: 181 GVFYSVHSLPPFWQTVSHMNPFFYMIDGFRYGFFGQSDVNPLVSSTVVAFFLVLLAGVGM 240 Query: 241 RMLKSGYKLR 250 +LKSGYKLR Sbjct: 241 SLLKSGYKLR 250 >ref|YP_001101303.1| ABC transporter membrane protein [Herminiimonas arsenicoxydans] emb|CAL63182.1| ABC transporter, permease component [Herminiimonas arsenicoxydans] Length = 251 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 204/250 (81%), Positives = 224/250 (89%) Query: 1 MTGFQTLFYKEVLRFWKVATQTVTAPIMTAMLYLLIFGHVLQDRVQVYPGVQYTGFLVPG 60 M+GFQTL YKEVLRFWKVATQTV API+TA+LYLLIFGHVL++ VQVYPGV YT FLVPG Sbjct: 1 MSGFQTLLYKEVLRFWKVATQTVAAPILTAVLYLLIFGHVLKNHVQVYPGVNYTTFLVPG 60 Query: 61 LVMMSVLQNAFANSSSSLIQSKITGNLVFVLLTPLSHWEMFGGYVLAAVVRGLIVGAGVF 120 LVMMSVLQNAFAN+SSSLIQSKITGNLVFVLLTPLSHWE FG YVLAA+VRGL VG GVF Sbjct: 61 LVMMSVLQNAFANASSSLIQSKITGNLVFVLLTPLSHWEFFGAYVLAAMVRGLAVGCGVF 120 Query: 121 VVTAWFGHLSFVAPWWIVIFALLGAAILGTMGLVAGIWAEKFDQLAAFQNFLIVPLTFLA 180 +VTAWF +SFVAPWWI IF +LGAA+LGT+GL+AG+WAEKFDQLAAFQNF+IVP TFL+ Sbjct: 121 LVTAWFADMSFVAPWWIAIFVILGAALLGTLGLIAGMWAEKFDQLAAFQNFVIVPATFLS 180 Query: 181 GVFYSIHSLPPFWQTVSHFNPFFYMIDGFRYGFFGQSDINPFISLAIVSVFFIALSTLAV 240 GVFYSIHSLPP WQTVSHFNPFFYMIDGFRYGFFGQSD+NP S V+ F + LS AV Sbjct: 181 GVFYSIHSLPPVWQTVSHFNPFFYMIDGFRYGFFGQSDVNPLTSCLAVAGFLLLLSGFAV 240 Query: 241 RMLKSGYKLR 250 +LKSGYKLR Sbjct: 241 YLLKSGYKLR 250 >ref|YP_560591.1| ABC multidrug efflux pump, inner membrane subunit [Burkholderia xenovorans LB400] gb|ABE32539.1| ABC multidrug efflux pump, inner membrane subunit [Burkholderia xenovorans LB400] Length = 254 Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust. Identities = 194/249 (77%), Positives = 218/249 (87%) Query: 2 TGFQTLFYKEVLRFWKVATQTVTAPIMTAMLYLLIFGHVLQDRVQVYPGVQYTGFLVPGL 61 +GF TLFYKE+LRFWKVA QTV API+TA+LYL IFGH L+ VQVYPGV+YT FL+PGL Sbjct: 5 SGFTTLFYKELLRFWKVAFQTVLAPIITALLYLTIFGHALRGHVQVYPGVEYTSFLIPGL 64 Query: 62 VMMSVLQNAFANSSSSLIQSKITGNLVFVLLTPLSHWEMFGGYVLAAVVRGLIVGAGVFV 121 VMMSVLQNAFANSSSSLIQSKITGNLVFVLL PLSH+EMFG YVLAAV RGL VG GVF+ Sbjct: 65 VMMSVLQNAFANSSSSLIQSKITGNLVFVLLPPLSHYEMFGAYVLAAVARGLAVGFGVFI 124 Query: 122 VTAWFGHLSFVAPWWIVIFALLGAAILGTMGLVAGIWAEKFDQLAAFQNFLIVPLTFLAG 181 VT WF +SF AP +IV+FA+ GAAILGT+GL+AGIWAEKFDQLAAFQNFLI+PLTFL+G Sbjct: 125 VTIWFVPVSFSAPLYIVLFAIFGAAILGTLGLIAGIWAEKFDQLAAFQNFLIMPLTFLSG 184 Query: 182 VFYSIHSLPPFWQTVSHFNPFFYMIDGFRYGFFGQSDINPFISLAIVSVFFIALSTLAVR 241 VFYS H+LPP W+ VS NPFFYMIDGFRYGFFG SDINP SLAIV+ FF+ L+ +A+R Sbjct: 185 VFYSTHTLPPVWREVSRLNPFFYMIDGFRYGFFGMSDINPLASLAIVAGFFVVLAVVAMR 244 Query: 242 MLKSGYKLR 250 ML SGYKLR Sbjct: 245 MLASGYKLR 253