BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0478.p (263 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777442.1| phosphoribosylformimino-5-aminoimidazole car... 483 e-134 ref|YP_001354974.1| phosphoribosylformimino-5-aminoimidazole car... 483 e-134 ref|YP_004751179.1| phosphoribosylformimino-5-aminoimidazole car... 477 e-133 ref|YP_001101295.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylami... 474 e-132 ref|ZP_04579887.1| phosphoribosylformimino-5-aminoimidazole carb... 436 e-120 >ref|YP_003777442.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Herbaspirillum seropedicae SmR1] emb|CAM32681.1| Phosphoribosylformimino-5-aminoimidazole carboxamide r [Herbaspirillum seropedicae] gb|ADJ65534.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase protein [Herbaspirillum seropedicae SmR1] Length = 265 Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust. Identities = 237/253 (93%), Positives = 243/253 (96%) Query: 1 MLLIPAIDLKDGHCVRLKQGDMDQATVFSQDPAEMARHWLLQGARRLHLVDLNGAFAGKP 60 MLLIPAIDLKDGHCVRLKQGDMDQATVFS+DPAEMA HWL QGARRLHLVDLNGAFAGKP Sbjct: 1 MLLIPAIDLKDGHCVRLKQGDMDQATVFSEDPAEMALHWLKQGARRLHLVDLNGAFAGKP 60 Query: 61 KNESAVKAILKAVRDFAVENEVEEIPVQLGGGIRDLDTIERYLDDGLSYIIIGTAAVKNP 120 KNE+AVKAILKAV FA ENEVEEIPVQLGGGIRDLDTIERYLDDGLSYIIIGTAAVKNP Sbjct: 61 KNEAAVKAILKAVASFAEENEVEEIPVQLGGGIRDLDTIERYLDDGLSYIIIGTAAVKNP 120 Query: 121 GFLHDACSAFPGQIIVGLDAKDGKVATDGWSKLSGHEVIDLAKKFEGYGCEAIVYTDIGR 180 GFLHDACSAFPGQIIVGLDAKDGKVATDGWSKLSGHEV+DLA+KFEGYGCEAIVYTDIGR Sbjct: 121 GFLHDACSAFPGQIIVGLDAKDGKVATDGWSKLSGHEVVDLAQKFEGYGCEAIVYTDIGR 180 Query: 181 DGMMGGVNIEATVRLAQAVAIPIIASGGVHNIKDVEALCGVQDEGIEAVICGRSIYEGTL 240 DGMMGGVNIEATVRLAQAV IPIIASGGVHN+ DVEALC V+DEGIEAVICGRSIYEGTL Sbjct: 181 DGMMGGVNIEATVRLAQAVTIPIIASGGVHNVGDVEALCRVEDEGIEAVICGRSIYEGTL 240 Query: 241 DLSSAQDRADELT 253 DL S QDRADELT Sbjct: 241 DLRSGQDRADELT 253 >ref|YP_001354974.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [Janthinobacterium sp. Marseille] sp|A6T377.1|HIS4_JANMA RecName: Full=1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; AltName: Full=Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase gb|ABR88780.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [Janthinobacterium sp. Marseille] Length = 261 Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust. Identities = 233/253 (92%), Positives = 246/253 (97%) Query: 1 MLLIPAIDLKDGHCVRLKQGDMDQATVFSQDPAEMARHWLLQGARRLHLVDLNGAFAGKP 60 MLLIPAIDLKDGHCVRLKQGDMDQATVFS+DPAEMARHWLLQGARRLHLVDLNGAFAGKP Sbjct: 1 MLLIPAIDLKDGHCVRLKQGDMDQATVFSEDPAEMARHWLLQGARRLHLVDLNGAFAGKP 60 Query: 61 KNESAVKAILKAVRDFAVENEVEEIPVQLGGGIRDLDTIERYLDDGLSYIIIGTAAVKNP 120 KNESAVK+IL+AVR++A +N +EEIPVQLGGGIRDLDTIERYLDDGLSYIIIGTAAVKNP Sbjct: 61 KNESAVKSILQAVREYAEKNGIEEIPVQLGGGIRDLDTIERYLDDGLSYIIIGTAAVKNP 120 Query: 121 GFLHDACSAFPGQIIVGLDAKDGKVATDGWSKLSGHEVIDLAKKFEGYGCEAIVYTDIGR 180 GFLHDACSAFPGQIIVGLDAKDGKVATDGWSKLSGHEVIDLAKKFE YGCE+I+YTDIGR Sbjct: 121 GFLHDACSAFPGQIIVGLDAKDGKVATDGWSKLSGHEVIDLAKKFEDYGCESIIYTDIGR 180 Query: 181 DGMMGGVNIEATVRLAQAVAIPIIASGGVHNIKDVEALCGVQDEGIEAVICGRSIYEGTL 240 DGMMGGVNIEATV+LAQ++ IP+IASGGVHNIKDVEALC VQDEGIE VICGRSIYEGTL Sbjct: 181 DGMMGGVNIEATVKLAQSMTIPVIASGGVHNIKDVEALCAVQDEGIEGVICGRSIYEGTL 240 Query: 241 DLSSAQDRADELT 253 DL SAQDRADELT Sbjct: 241 DLRSAQDRADELT 253 >ref|YP_004751179.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [Collimonas fungivorans Ter331] gb|AEK60356.1| Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [Collimonas fungivorans Ter331] Length = 271 Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust. Identities = 234/266 (87%), Positives = 247/266 (92%), Gaps = 4/266 (1%) Query: 1 MLLIPAIDLKDGHCVRLKQGDMDQATVFSQDPAEMARHWLLQGARRLHLVDLNGAFAGKP 60 MLLIPAIDLKDGHCVRLKQGDMDQATVFS DP EMARHWL+QGARRLHLVDLNGAFAGKP Sbjct: 1 MLLIPAIDLKDGHCVRLKQGDMDQATVFSDDPGEMARHWLMQGARRLHLVDLNGAFAGKP 60 Query: 61 KNESAVKAILKAVRDFAVENEVEEIPVQLGGGIRDLDTIERYLDDGLSYIIIGTAAVKNP 120 KNE AVKAI+KAVR+FA+ N VEEIPVQLGGGIRDLDTIERYLDDGLSYIIIGTAAVKNP Sbjct: 61 KNEPAVKAIIKAVREFAILNGVEEIPVQLGGGIRDLDTIERYLDDGLSYIIIGTAAVKNP 120 Query: 121 GFLHDACSAFPGQIIVGLDAKDGKVATDGWSKLSGHEVIDLAKKFEGYGCEAIVYTDIGR 180 GFLHDACSAFPGQIIVGLDAKDGKVATDGWSKLSGHEVIDLAKKFE YGC +IVYTDIGR Sbjct: 121 GFLHDACSAFPGQIIVGLDAKDGKVATDGWSKLSGHEVIDLAKKFEDYGCASIVYTDIGR 180 Query: 181 DGMMGGVNIEATVRLAQAVAIPIIASGGVHNIKDVEALCGVQDEGIEAVICGRSIYEGTL 240 DGMMGGVNIEATV+LAQ++ IP+IASGGVHN+KDVEALC VQDEGIEAVICGRSIYEGTL Sbjct: 181 DGMMGGVNIEATVKLAQSMTIPVIASGGVHNVKDVEALCAVQDEGIEAVICGRSIYEGTL 240 Query: 241 DLSSAQDRADELT----ASEGSDSEP 262 DL SAQ+RADEL+ EG +P Sbjct: 241 DLRSAQERADELSDEFIEDEGLSEQP 266 >ref|YP_001101295.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [Herminiimonas arsenicoxydans] sp|A4G9I7.1|HIS4_HERAR RecName: Full=1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; AltName: Full=Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase emb|CAL63174.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) [Herminiimonas arsenicoxydans] Length = 265 Score = 474 bits (1221), Expect = e-132, Method: Compositional matrix adjust. Identities = 229/253 (90%), Positives = 244/253 (96%) Query: 1 MLLIPAIDLKDGHCVRLKQGDMDQATVFSQDPAEMARHWLLQGARRLHLVDLNGAFAGKP 60 MLLIPAIDLKDGHCVRLKQGDMDQATVFS+DPA+MARHWL QGARRLHLVDLNGAFAGKP Sbjct: 1 MLLIPAIDLKDGHCVRLKQGDMDQATVFSEDPADMARHWLEQGARRLHLVDLNGAFAGKP 60 Query: 61 KNESAVKAILKAVRDFAVENEVEEIPVQLGGGIRDLDTIERYLDDGLSYIIIGTAAVKNP 120 KNE AVKAIL+AVR++A +N +EEIPVQLGGGIRDLDTIERYLDDGLSYIIIGTAAVKNP Sbjct: 61 KNEPAVKAILQAVREYAEKNGIEEIPVQLGGGIRDLDTIERYLDDGLSYIIIGTAAVKNP 120 Query: 121 GFLHDACSAFPGQIIVGLDAKDGKVATDGWSKLSGHEVIDLAKKFEGYGCEAIVYTDIGR 180 GFLHDACSAFPGQIIVGLDAKDGKVATDGWSKLSGHEVIDLAKKFE YGCE+I+YTDIGR Sbjct: 121 GFLHDACSAFPGQIIVGLDAKDGKVATDGWSKLSGHEVIDLAKKFEDYGCESIIYTDIGR 180 Query: 181 DGMMGGVNIEATVRLAQAVAIPIIASGGVHNIKDVEALCGVQDEGIEAVICGRSIYEGTL 240 DGMMGGVNIEATV+LAQ++ IP+IASGGVHNIKDVEALC VQ+EGIE VICGRSIYEGTL Sbjct: 181 DGMMGGVNIEATVKLAQSMTIPVIASGGVHNIKDVEALCAVQEEGIEGVICGRSIYEGTL 240 Query: 241 DLSSAQDRADELT 253 DL SAQDRADEL+ Sbjct: 241 DLRSAQDRADELS 253 >ref|ZP_04579887.1| phosphoribosylformimino-5-aminoimidazole carboxamide isomerase [Oxalobacter formigenes OXCC13] gb|EEO30860.1| phosphoribosylformimino-5-aminoimidazole carboxamide isomerase [Oxalobacter formigenes OXCC13] Length = 255 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 211/253 (83%), Positives = 233/253 (92%) Query: 1 MLLIPAIDLKDGHCVRLKQGDMDQATVFSQDPAEMARHWLLQGARRLHLVDLNGAFAGKP 60 MLLIPAIDLKDG CVRLKQGDM+QATVFS+DPAEMA HWL QGARRLHLVDLNGAFAGKP Sbjct: 1 MLLIPAIDLKDGSCVRLKQGDMEQATVFSEDPAEMALHWLEQGARRLHLVDLNGAFAGKP 60 Query: 61 KNESAVKAILKAVRDFAVENEVEEIPVQLGGGIRDLDTIERYLDDGLSYIIIGTAAVKNP 120 NESAVK IL+ V+DFA +N+++EIPVQLGGGIRDLDTIERYLD GLSYIIIGTAAVKNP Sbjct: 61 VNESAVKNILQVVQDFAEDNDLDEIPVQLGGGIRDLDTIERYLDHGLSYIIIGTAAVKNP 120 Query: 121 GFLHDACSAFPGQIIVGLDAKDGKVATDGWSKLSGHEVIDLAKKFEGYGCEAIVYTDIGR 180 GFL DACS FPGQIIVGLDAKDGKVATDGWSKLS H+V++LAKK+E +G E+I+YTDIGR Sbjct: 121 GFLQDACSVFPGQIIVGLDAKDGKVATDGWSKLSRHDVVELAKKYESFGVESIIYTDIGR 180 Query: 181 DGMMGGVNIEATVRLAQAVAIPIIASGGVHNIKDVEALCGVQDEGIEAVICGRSIYEGTL 240 DGMMGGVN+EATV+LA+AV +P+IASGGVHNIKDVEALC VQ EGIE VICGRSIYEGTL Sbjct: 181 DGMMGGVNVEATVKLARAVKVPVIASGGVHNIKDVEALCEVQGEGIEGVICGRSIYEGTL 240 Query: 241 DLSSAQDRADELT 253 +L AQ RADEL+ Sbjct: 241 NLEEAQARADELS 253