BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0467.p         (143 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004751317.1| large-conductance mechanosensitive channel [...   223   5e-57
ref|YP_003777428.1| large conductance mechanosensitive channel p...   214   4e-54
ref|YP_001101283.1| large-conductance mechanosensitive channel [...   213   6e-54
ref|ZP_08273731.1| Large-conductance mechanosensitive channel [O...   210   7e-53
ref|YP_001354962.1| large-conductance mechanosensitive channel [...   190   6e-47

>ref|YP_004751317.1| large-conductance mechanosensitive channel [Collimonas fungivorans
           Ter331]
 gb|AEK60494.1| Large-conductance mechanosensitive channel [Collimonas fungivorans
           Ter331]
          Length = 146

 Score =  223 bits (569), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 112/143 (78%), Positives = 125/143 (87%), Gaps = 7/143 (4%)

Query: 1   MGMMQEFRTFALKGNVVDLAVGVIIGGAFGKIVESLVQDIIMPVVGRIFGGLDFANYYLP 60
           MGMMQEF+TFALKGNV+DLAVGVIIGGAFGKIV+SLVQDIIMPVVG+IFGGLDFAN+Y P
Sbjct: 11  MGMMQEFKTFALKGNVMDLAVGVIIGGAFGKIVDSLVQDIIMPVVGKIFGGLDFANHYFP 70

Query: 61  LNGQGTQLTLIEAKKAGAVFAYGNFLTILINFLILAFIIFQMVRMINKARDLATHEKAAE 120
           LNGQ T+LTL EAKKAGAV AYGNF+TI +NF+ILAF+IFQMVR+INK R         +
Sbjct: 71  LNGQSTELTLAEAKKAGAVLAYGNFITIALNFVILAFVIFQMVRVINKLR-------GEQ 123

Query: 121 PAAPAAPPEDIVLLREIRDSLKK 143
           P APAA PE+ VLLREIRDSLKK
Sbjct: 124 PPAPAADPENTVLLREIRDSLKK 146


>ref|YP_003777428.1| large conductance mechanosensitive channel protein [Herbaspirillum
           seropedicae SmR1]
 gb|ADJ65520.1| large conductance mechanosensitive channel protein [Herbaspirillum
           seropedicae SmR1]
          Length = 145

 Score =  214 bits (544), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 116/143 (81%), Positives = 128/143 (89%)

Query: 1   MGMMQEFRTFALKGNVVDLAVGVIIGGAFGKIVESLVQDIIMPVVGRIFGGLDFANYYLP 60
           M M+++FR FA+KGNVVDLAVGVIIGGAFGKIV SLV+DIIMP+VG+IFGGLDFANYYLP
Sbjct: 1   MSMLKDFRAFAIKGNVVDLAVGVIIGGAFGKIVSSLVEDIIMPIVGKIFGGLDFANYYLP 60

Query: 61  LNGQGTQLTLIEAKKAGAVFAYGNFLTILINFLILAFIIFQMVRMINKARDLATHEKAAE 120
           LNGQ   L L EA+KAGAVFAYGNFLTILINFLILAFIIFQMVR INKARDLA+  + A 
Sbjct: 61  LNGQAYGLPLAEARKAGAVFAYGNFLTILINFLILAFIIFQMVRAINKARDLASKHEEAA 120

Query: 121 PAAPAAPPEDIVLLREIRDSLKK 143
           PAAPA  PED++LLREIRDSLKK
Sbjct: 121 PAAPAPTPEDVLLLREIRDSLKK 143


>ref|YP_001101283.1| large-conductance mechanosensitive channel [Herminiimonas
           arsenicoxydans]
 sp|A4G9H5.1|MSCL_HERAR RecName: Full=Large-conductance mechanosensitive channel
 emb|CAL63162.1| Large-conductance mechanosensitive channel [Herminiimonas
           arsenicoxydans]
          Length = 137

 Score =  213 bits (543), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 107/143 (74%), Positives = 123/143 (86%), Gaps = 6/143 (4%)

Query: 1   MGMMQEFRTFALKGNVVDLAVGVIIGGAFGKIVESLVQDIIMPVVGRIFGGLDFANYYLP 60
           MGMMQEF+ FA+KGNVVDLAV VIIGGAFGKIV+SLVQDIIMPVVG+IFGGLDF+NYYLP
Sbjct: 1   MGMMQEFKAFAVKGNVVDLAVAVIIGGAFGKIVDSLVQDIIMPVVGKIFGGLDFSNYYLP 60

Query: 61  LNGQGTQLTLIEAKKAGAVFAYGNFLTILINFLILAFIIFQMVRMINKARDLATHEKAAE 120
           LN Q   LTL+EAKK GAVFAYG+F+TILINFLILAFIIFQMVRM++K +      ++  
Sbjct: 61  LNNQDISLTLVEAKKLGAVFAYGSFITILINFLILAFIIFQMVRMLSKLK------RSEP 114

Query: 121 PAAPAAPPEDIVLLREIRDSLKK 143
           PA   A PE++VLLREIRD+LKK
Sbjct: 115 PAEAPATPEEVVLLREIRDALKK 137


>ref|ZP_08273731.1| Large-conductance mechanosensitive channel [Oxalobacteraceae
           bacterium IMCC9480]
 gb|EGF32809.1| Large-conductance mechanosensitive channel [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 139

 Score =  210 bits (534), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 106/143 (74%), Positives = 125/143 (87%), Gaps = 4/143 (2%)

Query: 1   MGMMQEFRTFALKGNVVDLAVGVIIGGAFGKIVESLVQDIIMPVVGRIFGGLDFANYYLP 60
           MGMMQEF+TFA+KGNV+DLAVGVIIG AFGKIV+S+VQD+IMP+V  IFGGLDFANYY+P
Sbjct: 1   MGMMQEFKTFAVKGNVMDLAVGVIIGAAFGKIVDSVVQDLIMPIVSTIFGGLDFANYYIP 60

Query: 61  LNGQGTQLTLIEAKKAGAVFAYGNFLTILINFLILAFIIFQMVRMINKARDLATHEKAAE 120
           LNGQG QL+L+EAKKAGAV AYGNFLTI INFLILAFIIFQM+R++N AR     ++ A 
Sbjct: 61  LNGQGMQLSLVEAKKAGAVLAYGNFLTISINFLILAFIIFQMIRLVNAAR----RKQPAP 116

Query: 121 PAAPAAPPEDIVLLREIRDSLKK 143
             APA  PED++LLREIRD+L+K
Sbjct: 117 APAPAVTPEDVLLLREIRDALRK 139


>ref|YP_001354962.1| large-conductance mechanosensitive channel [Janthinobacterium sp.
           Marseille]
 sp|A6T365.1|MSCL_JANMA RecName: Full=Large-conductance mechanosensitive channel
 gb|ABR88660.1| large conductance mechanosensitive channel, MscL family
           [Janthinobacterium sp. Marseille]
          Length = 139

 Score =  190 bits (482), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 102/143 (71%), Positives = 118/143 (82%), Gaps = 4/143 (2%)

Query: 1   MGMMQEFRTFALKGNVVDLAVGVIIGGAFGKIVESLVQDIIMPVVGRIFGGLDFANYYLP 60
           MGMMQEF+ FA+KGNVVDLAV VI+G AFGKIV+SLVQD+IMPVVG+IFGGLDF+NYY+ 
Sbjct: 1   MGMMQEFKEFAVKGNVVDLAVAVIVGAAFGKIVDSLVQDVIMPVVGKIFGGLDFSNYYIA 60

Query: 61  LNGQGTQLTLIEAKKAGAVFAYGNFLTILINFLILAFIIFQMVRMINKARDLATHEKAAE 120
           LN Q   LTL+EAKK GAV AYGNF+TI +NF+ILAFIIFQMVR++NK +      +   
Sbjct: 61  LNNQDPNLTLVEAKKLGAVLAYGNFITIALNFIILAFIIFQMVRLLNKLK----RTEPPA 116

Query: 121 PAAPAAPPEDIVLLREIRDSLKK 143
           P  PAA PEDI LLREIRDSLKK
Sbjct: 117 PEEPAAVPEDIALLREIRDSLKK 139