BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0464.p (254 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004751320.1| ubiquinol cytochrome C oxidoreductase, cytoc... 444 e-123 ref|YP_003777425.1| cytochrome c1 precursor transmembrane protei... 436 e-120 ref|YP_001101280.1| putative cytochrome c1 precursor [Herminiimo... 416 e-114 ref|YP_001354959.1| cytochrome c1 precursor [Janthinobacterium s... 410 e-113 ref|ZP_08273728.1| ubiquinol cytochrome C oxidoreductase, cytoch... 404 e-111 >ref|YP_004751320.1| ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit [Collimonas fungivorans Ter331] gb|AEK60497.1| ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit [Collimonas fungivorans Ter331] Length = 268 Score = 444 bits (1142), Expect = e-123, Method: Compositional matrix adjust. Identities = 207/255 (81%), Positives = 234/255 (91%), Gaps = 1/255 (0%) Query: 1 MTLLKRLIATLVLLPALAYANE-GGYPLDKAPNRTTDVSSLQNGAKLFVNYCLNCHSASA 59 MTLLK+L+ATLVLLPALA+A+E GGYPLD AP ++ D+S+LQNGAKLFVNYCLNCHSAS+ Sbjct: 14 MTLLKKLVATLVLLPALAFASEEGGYPLDTAPEQSNDLSALQNGAKLFVNYCLNCHSASS 73 Query: 60 MRYNRLRDLGLTEDQIKNNLLFTGEKVGDLMKTTMLPQDAKAWFGAVPPDLSVIARAKAS 119 MRYNRL D+GL+++QIKNNLLFTG+KVGDLM M P+D+KAWFGA PPDLSVIARAKAS Sbjct: 74 MRYNRLHDIGLSDEQIKNNLLFTGDKVGDLMTIAMSPKDSKAWFGAAPPDLSVIARAKAS 133 Query: 120 DAGSGPDWIYTYLRTYYKDDTRPTGWNNMVFPNVGMPHVLWELQGIRAPKFAEEKDPHEE 179 AGSGPDW+YTYLRT+YKDDTRPTGWNNMVFPNVGMPHVLWEL+GIR K+ + KDPHEE Sbjct: 134 GAGSGPDWLYTYLRTFYKDDTRPTGWNNMVFPNVGMPHVLWELEGIRTAKYEDVKDPHEE 193 Query: 180 GKTIHKFVGFEQLKPGKLSAVEYDNAVADLVGYLQWMGEPAQNTRKRLGVWVLLFLGLFL 239 GKT HKFVGFEQ+KPGK++ VEYD AVADLV YL WMGEPAQNTRKRLGVWVLLFLG+F Sbjct: 194 GKTEHKFVGFEQVKPGKMNKVEYDVAVADLVSYLAWMGEPAQNTRKRLGVWVLLFLGMFF 253 Query: 240 VLAWRLNASFWKEVK 254 VLAWRLNAS+WK+VK Sbjct: 254 VLAWRLNASYWKDVK 268 >ref|YP_003777425.1| cytochrome c1 precursor transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ65517.1| cytochrome c1 precursor transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 254 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 209/254 (82%), Positives = 231/254 (90%) Query: 1 MTLLKRLIATLVLLPALAYANEGGYPLDKAPNRTTDVSSLQNGAKLFVNYCLNCHSASAM 60 MTLLK++IA L LLPALA A+EG +PLD AP+RT DVSSLQNGAKLFVNYCLNCHSAS+M Sbjct: 1 MTLLKKVIAALALLPALACASEGTFPLDHAPDRTKDVSSLQNGAKLFVNYCLNCHSASSM 60 Query: 61 RYNRLRDLGLTEDQIKNNLLFTGEKVGDLMKTTMLPQDAKAWFGAVPPDLSVIARAKASD 120 RYNRLRD+GLTEDQIKNNL+F+GEKVGDLMK ++ PQDAKAWFGA PPDLSVIARAKAS+ Sbjct: 61 RYNRLRDIGLTEDQIKNNLMFSGEKVGDLMKISLSPQDAKAWFGAAPPDLSVIARAKASE 120 Query: 121 AGSGPDWIYTYLRTYYKDDTRPTGWNNMVFPNVGMPHVLWELQGIRAPKFAEEKDPHEEG 180 AGSGPDWIYTYLR+YY DD+RPTGWNNM+FPNVGMPHVLWELQGIR KF EEKDPH+ Sbjct: 121 AGSGPDWIYTYLRSYYTDDSRPTGWNNMLFPNVGMPHVLWELQGIRKAKFVEEKDPHDAS 180 Query: 181 KTIHKFVGFEQLKPGKLSAVEYDNAVADLVGYLQWMGEPAQNTRKRLGVWVLLFLGLFLV 240 KTIHKF GFEQ+KPGK++ EYDN VADLV YLQWM EPAQNTRKRLGVWVLLFLG+F V Sbjct: 181 KTIHKFAGFEQVKPGKMTTAEYDNNVADLVAYLQWMAEPAQNTRKRLGVWVLLFLGIFAV 240 Query: 241 LAWRLNASFWKEVK 254 LAWRLNAS+WK +K Sbjct: 241 LAWRLNASYWKNIK 254 >ref|YP_001101280.1| putative cytochrome c1 precursor [Herminiimonas arsenicoxydans] emb|CAL63159.1| Cytochrome c1 precursor [Herminiimonas arsenicoxydans] Length = 254 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 187/254 (73%), Positives = 220/254 (86%) Query: 1 MTLLKRLIATLVLLPALAYANEGGYPLDKAPNRTTDVSSLQNGAKLFVNYCLNCHSASAM 60 M LLK+LIA LVLLP LA A G +PLD+AP+ T D+++LQNGA+LFVNYCL+CHSASAM Sbjct: 1 MKLLKKLIAALVLLPGLALAAGGEFPLDRAPDHTKDLAALQNGARLFVNYCLSCHSASAM 60 Query: 61 RYNRLRDLGLTEDQIKNNLLFTGEKVGDLMKTTMLPQDAKAWFGAVPPDLSVIARAKASD 120 RYN+L+D+GLTE+QIKNNLLFT +KVG +M M P+DAK WFGA PPDLSVIARAKAS Sbjct: 61 RYNKLQDIGLTEEQIKNNLLFTSDKVGSMMTIAMAPKDAKEWFGATPPDLSVIARAKASS 120 Query: 121 AGSGPDWIYTYLRTYYKDDTRPTGWNNMVFPNVGMPHVLWELQGIRAPKFAEEKDPHEEG 180 AGSGPDW+YTYLRTYYKDDTR TGWNN+ FPNVGMPHVLWELQG+R KF EEKDPH+ Sbjct: 121 AGSGPDWLYTYLRTYYKDDTRATGWNNLTFPNVGMPHVLWELQGVREAKFVEEKDPHDAS 180 Query: 181 KTIHKFVGFEQLKPGKLSAVEYDNAVADLVGYLQWMGEPAQNTRKRLGVWVLLFLGLFLV 240 K +HKF GFEQ+ PGK++A+EYD +VADLV ++ WM EPAQNTRKRLGVWVLLFLG+ +V Sbjct: 181 KVVHKFAGFEQVTPGKMTALEYDKSVADLVSFMTWMAEPAQNTRKRLGVWVLLFLGVCIV 240 Query: 241 LAWRLNASFWKEVK 254 L WRLNAS+WK++K Sbjct: 241 LTWRLNASYWKDIK 254 >ref|YP_001354959.1| cytochrome c1 precursor [Janthinobacterium sp. Marseille] gb|ABR88729.1| cytochrome c1 precursor [Janthinobacterium sp. Marseille] Length = 254 Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust. Identities = 185/254 (72%), Positives = 221/254 (87%) Query: 1 MTLLKRLIATLVLLPALAYANEGGYPLDKAPNRTTDVSSLQNGAKLFVNYCLNCHSASAM 60 MTLLK+LIA+LVLLP L A+E +PLD AP+RT D+++LQNGA+LFVNYCL+CH+AS++ Sbjct: 1 MTLLKKLIASLVLLPGLVLASESDFPLDHAPDRTKDLAALQNGARLFVNYCLSCHAASSL 60 Query: 61 RYNRLRDLGLTEDQIKNNLLFTGEKVGDLMKTTMLPQDAKAWFGAVPPDLSVIARAKASD 120 RYN+L+DLGLTE+QIKNNLLFT +KVG +M M P+DAK WFGAVPPDLSVIARAKAS Sbjct: 61 RYNKLQDLGLTEEQIKNNLLFTSDKVGGMMTIAMAPKDAKNWFGAVPPDLSVIARAKASG 120 Query: 121 AGSGPDWIYTYLRTYYKDDTRPTGWNNMVFPNVGMPHVLWELQGIRAPKFAEEKDPHEEG 180 AG+G DW+YTYLR+YYKDDTR TGWNNMVFPNVGMPHVLWELQGIR KF EKDPH+ Sbjct: 121 AGTGADWLYTYLRSYYKDDTRATGWNNMVFPNVGMPHVLWELQGIRDAKFVNEKDPHDPN 180 Query: 181 KTIHKFVGFEQLKPGKLSAVEYDNAVADLVGYLQWMGEPAQNTRKRLGVWVLLFLGLFLV 240 K +HKF GFEQ+ PG L+ +EYD AVADLV ++ WM EPAQNTRKRLGVWVL+FLG+F+V Sbjct: 181 KVVHKFAGFEQVTPGLLTPLEYDKAVADLVSFMTWMAEPAQNTRKRLGVWVLMFLGVFIV 240 Query: 241 LAWRLNASFWKEVK 254 + WRLNAS+WK++K Sbjct: 241 ITWRLNASYWKDIK 254 >ref|ZP_08273728.1| ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit [Oxalobacteraceae bacterium IMCC9480] gb|EGF32806.1| ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit [Oxalobacteraceae bacterium IMCC9480] Length = 254 Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust. Identities = 181/254 (71%), Positives = 218/254 (85%) Query: 1 MTLLKRLIATLVLLPALAYANEGGYPLDKAPNRTTDVSSLQNGAKLFVNYCLNCHSASAM 60 M L K+LI L +PALA ANEGG LD+AP+ TD+SSLQ+GAKLFVNYCLNCH+A++M Sbjct: 1 MKLFKKLILVLAFVPALALANEGGPKLDRAPDHATDLSSLQHGAKLFVNYCLNCHAAASM 60 Query: 61 RYNRLRDLGLTEDQIKNNLLFTGEKVGDLMKTTMLPQDAKAWFGAVPPDLSVIARAKASD 120 RYNR+RD+GL+EDQIK NLLF +KVGDLMK +M P+D+K WFG VPPDLSV+ARAK+S Sbjct: 61 RYNRMRDIGLSEDQIKANLLFATDKVGDLMKVSMAPKDSKEWFGVVPPDLSVMARAKSSG 120 Query: 121 AGSGPDWIYTYLRTYYKDDTRPTGWNNMVFPNVGMPHVLWELQGIRAPKFAEEKDPHEEG 180 AGSG D++YTYLRT+YKD++RPTGWNN+V+PN MPHVLWELQGIR K+ E KDPH+E Sbjct: 121 AGSGEDYLYTYLRTFYKDESRPTGWNNLVYPNAAMPHVLWELQGIREAKYVEVKDPHDES 180 Query: 181 KTIHKFVGFEQLKPGKLSAVEYDNAVADLVGYLQWMGEPAQNTRKRLGVWVLLFLGLFLV 240 KT HKF GF Q+KPGK+SA+EYD A+ DLVG++ WMGEPAQN R+RLGV VLLF+ LF+V Sbjct: 181 KTEHKFAGFTQVKPGKMSAIEYDQAIGDLVGFMSWMGEPAQNQRRRLGVIVLLFMSLFVV 240 Query: 241 LAWRLNASFWKEVK 254 +AWRLNASFWKEVK Sbjct: 241 IAWRLNASFWKEVK 254