BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0460.p (258 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCD13128.1| unnamed protein product [Trypanosoma congolense ... 291 9e-77 ref|NP_886575.1| metal transporter [Bordetella bronchiseptica RB... 277 9e-73 ref|NP_882387.1| putative metal transporter [Bordetella parapert... 277 1e-72 ref|YP_004536002.1| cation efflux protein [Novosphingobium sp. P... 273 2e-71 ref|YP_259615.1| cation efflux protein [Pseudomonas fluorescens ... 268 4e-70 >emb|CCD13128.1| unnamed protein product [Trypanosoma congolense IL3000] Length = 321 Score = 291 bits (744), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 167/256 (65%), Positives = 203/256 (79%), Gaps = 2/256 (0%) Query: 1 MALLADGFHMATHAGALAIAAMAYSFAKRNAASAKYSFGTGKVGDLAGFASALILGMVSI 60 MALLADGFHMATHAGAL IAA AY +AKR+A++A+YSFGTGKVGDL GFASALILG+VS+ Sbjct: 50 MALLADGFHMATHAGALGIAAAAYGYAKRHASNARYSFGTGKVGDLGGFASALILGLVSL 109 Query: 61 GIAVESVMRVITPTTVAFDEAIFVAVIGLLVNIVSAFMLSGGSHGHHDHGHAHEHHHHHH 120 GIA ES+ R+ PT V F A +A++GL VN+VSA +LSGG + HH H H + HH H Sbjct: 110 GIAGESLFRLFQPTQVQFGTATLIAIVGLAVNVVSALLLSGGHNHHHGHDHGQDESHHAH 169 Query: 121 GHDNNLRSAYVHVLADALTSVLAIAALLAGRYYGMIWLDPAMGIVGAIVIARWAYTLMKD 180 GHDNNLRSAY+HV+ADALTSVLAIAALLAGRY G +WLDPAMGIVGA+VIARWA++LM+ Sbjct: 170 GHDNNLRSAYIHVIADALTSVLAIAALLAGRYLGWVWLDPAMGIVGAVVIARWAWSLMRV 229 Query: 181 TAKMLLDTTDESVADSIRRKLAAFDGTAITDLHVWKVGPQARAAIVSLTISAPEVEPE-I 239 TA +LLD TD+ VA+ IR + +I DLHVW+VGPQARAAIVS+ + +P V + I Sbjct: 230 TASVLLDQTDDHVAEEIRELVERQGDASIIDLHVWQVGPQARAAIVSV-LGSPAVNAQNI 288 Query: 240 RAALLTIDNLDHLTIE 255 R L T+ + HLT+E Sbjct: 289 RERLATVHEITHLTVE 304 >ref|NP_886575.1| metal transporter [Bordetella bronchiseptica RB50] emb|CAE30524.1| putative metal transporter [Bordetella bronchiseptica RB50] Length = 311 Score = 277 bits (709), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 157/256 (61%), Positives = 190/256 (74%), Gaps = 1/256 (0%) Query: 1 MALLADGFHMATHAGALAIAAMAYSFAKRNAASAKYSFGTGKVGDLAGFASALILGMVSI 60 MALLADGFHMATHAGAL IAA+AY++AKRNA + +SFGTGKVG+LAGFASAL+L MVS+ Sbjct: 52 MALLADGFHMATHAGALGIAAIAYAYAKRNADNRAFSFGTGKVGELAGFASALMLAMVSL 111 Query: 61 GIAVESVMRVITPTTVAFDEAIFVAVIGLLVNIVSAFMLSGGSHGH-HDHGHAHEHHHHH 119 I VES +R++ PT VAF EA +AV+GL VN+VSA +L GG GH H H H H Sbjct: 112 AIGVESAIRLVQPTDVAFGEATLIAVVGLGVNLVSALLLGGGHAGHVHAEHHHPGHARHP 171 Query: 120 HGHDNNLRSAYVHVLADALTSVLAIAALLAGRYYGMIWLDPAMGIVGAIVIARWAYTLMK 179 HGHDNNLRSAYVHVLADALTSVLAI ALLAGRY G IWLDP +G+VGA+VIARWA+TLM+ Sbjct: 172 HGHDNNLRSAYVHVLADALTSVLAIVALLAGRYLGWIWLDPVIGMVGAVVIARWAWTLMR 231 Query: 180 DTAKMLLDTTDESVADSIRRKLAAFDGTAITDLHVWKVGPQARAAIVSLTISAPEVEPEI 239 DT +LLD D + +R + I DLHVW++GPQA AAIVS+ + +I Sbjct: 232 DTGAILLDKADRHLEAEVRGAIETAGDATIADLHVWQIGPQAHAAIVSVVAARGVTASQI 291 Query: 240 RAALLTIDNLDHLTIE 255 R + +I + HLT+E Sbjct: 292 RERVSSIHEVRHLTVE 307 >ref|NP_882387.1| putative metal transporter [Bordetella parapertussis 12822] emb|CAE39763.1| putative metal transporter [Bordetella parapertussis] Length = 311 Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 156/256 (60%), Positives = 190/256 (74%), Gaps = 1/256 (0%) Query: 1 MALLADGFHMATHAGALAIAAMAYSFAKRNAASAKYSFGTGKVGDLAGFASALILGMVSI 60 MALLADGFHMATHAGAL IAA+AY++AKRNA + +SFGTGKVG+LAGFASAL+L MVS+ Sbjct: 52 MALLADGFHMATHAGALGIAAIAYAYAKRNADNRAFSFGTGKVGELAGFASALMLAMVSL 111 Query: 61 GIAVESVMRVITPTTVAFDEAIFVAVIGLLVNIVSAFMLSGGSHGH-HDHGHAHEHHHHH 119 I VES +R++ PT VAF EA +AV+GL VN+VSA +L GG GH H H H H Sbjct: 112 AIGVESAIRLVQPTDVAFGEATLIAVVGLGVNLVSALLLGGGHAGHVHAEHHHPGHARHP 171 Query: 120 HGHDNNLRSAYVHVLADALTSVLAIAALLAGRYYGMIWLDPAMGIVGAIVIARWAYTLMK 179 HGHDNNLRSAYVHVLADALTSVLAI ALLAGRY G IWLDP +G+VGA+VIARWA+TLM+ Sbjct: 172 HGHDNNLRSAYVHVLADALTSVLAIVALLAGRYLGWIWLDPVIGMVGAVVIARWAWTLMR 231 Query: 180 DTAKMLLDTTDESVADSIRRKLAAFDGTAITDLHVWKVGPQARAAIVSLTISAPEVEPEI 239 DT +LLD D + +R + I DLH+W++GPQA AAIVS+ + +I Sbjct: 232 DTGAILLDKADRHLEAEVRGAIETAGDATIADLHIWQIGPQAHAAIVSVVAARGVTASQI 291 Query: 240 RAALLTIDNLDHLTIE 255 R + +I + HLT+E Sbjct: 292 RERVSSIHEVRHLTVE 307 >ref|YP_004536002.1| cation efflux protein [Novosphingobium sp. PP1Y] emb|CCA94184.1| cation efflux protein [Novosphingobium sp. PP1Y] Length = 325 Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 159/274 (58%), Positives = 198/274 (72%), Gaps = 17/274 (6%) Query: 1 MALLADGFHMATHAGALAIAAMAYSFAKRNAASAKYSFGTGKVGDLAGFASALILGMVSI 60 MALLADGFHMATHAGAL++AAMAY++AKR+ + +SFGTGKVGDLAGFASAL+L M ++ Sbjct: 52 MALLADGFHMATHAGALSVAAMAYAYAKRHKRNPAFSFGTGKVGDLAGFASALVLAMFAL 111 Query: 61 GIAVESVMRVITPTTVAFDEAIFVAVIGLLVNIVSAFMLSGGSHGHHDHGHAHEHHHHHH 120 GI ES MR+++P VAF EA +A+IGL VN+VSA +LSG H HDH H H H HHH Sbjct: 112 GIGFESFMRLLSPVRVAFGEATVIAIIGLAVNVVSALLLSGHHHHGHDHHHGHHHGHHHG 171 Query: 121 GH----------------DNNLRSAYVHVLADALTSVLAIAALLAGRYYGMIWLDPAMGI 164 DNNLRSAY+HVLADALTSVLAIAALL+GRY G +WLDP MG+ Sbjct: 172 HDHDHGHRQGHHHGHGHGDNNLRSAYMHVLADALTSVLAIAALLSGRYLGWVWLDPVMGL 231 Query: 165 VGAIVIARWAYTLMKDTAKMLLDTTDESVADSIRRKLAAFDGTAITDLHVWKVGPQARAA 224 VGA+VIARW++TLM+DTA +LLD TD+ VA +R + A I DLHVW+VGP+A AA Sbjct: 232 VGALVIARWSWTLMRDTASVLLDRTDDHVAAEVRELVEAPGDAVICDLHVWRVGPEAHAA 291 Query: 225 IVSLTISAPEVEP-EIRAALLTIDNLDHLTIEAH 257 IV +++ V+ E+R L + L H+TIE + Sbjct: 292 IVGVSVHEERVDTAELRRRLRPVHELQHITIERY 325 >ref|YP_259615.1| cation efflux protein [Pseudomonas fluorescens Pf-5] gb|AAY91781.1| cation efflux protein [Pseudomonas fluorescens Pf-5] Length = 332 Score = 268 bits (686), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 160/277 (57%), Positives = 189/277 (68%), Gaps = 22/277 (7%) Query: 1 MALLADGFHMATHAGALAIAAMAYSFAKRNAASAKYSFGTGKVGDLAGFASALILGMVSI 60 MALLADG HMATHAGAL IAA AY FA+RNA + ++SFGTGKVGDLAGFASA+ILG+V++ Sbjct: 52 MALLADGLHMATHAGALGIAAAAYGFARRNAGNRRFSFGTGKVGDLAGFASAIILGLVAL 111 Query: 61 GIAVESVMRVITPTTVAFDEAIFVAVIGLLVNIVSAFMLSGGSHGHHDHGHAHEH----- 115 GIA ES++R+ PT VAF EA +AV GLLVNI+SA++L GG H Sbjct: 112 GIAGESLVRLFQPTRVAFGEATLIAVAGLLVNILSAWLLGGGHDHHGHGHSHGHSHGHSH 171 Query: 116 -----------------HHHHHGHDNNLRSAYVHVLADALTSVLAIAALLAGRYYGMIWL 158 H G DNNLRSAYVHVLADALTSVLAIAALLAGRY G +WL Sbjct: 172 DHEHHEHHEHHEHHEHHQSHRAGGDNNLRSAYVHVLADALTSVLAIAALLAGRYLGWVWL 231 Query: 159 DPAMGIVGAIVIARWAYTLMKDTAKMLLDTTDESVADSIRRKLAAFDGTAITDLHVWKVG 218 DPAMGIVGA+VIARW+Y L+K +A +LLD +DE VA IR + +I DLHVW+VG Sbjct: 232 DPAMGIVGALVIARWSYALIKSSAAVLLDASDEQVAGQIRASVEGPGDASIVDLHVWQVG 291 Query: 219 PQARAAIVSLTISAPEVEPEIRAALLTIDNLDHLTIE 255 P ARAAIVS+ A +RA L + L HLT+E Sbjct: 292 PGARAAIVSVVARASLSAETVRARLAALPGLSHLTLE 328