BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0442.p (294 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773921.1| bacitracin resistance undecaprenol kinase 2 ... 488 e-136 ref|YP_004751500.1| Undecaprenyl-diphosphatase [Collimonas fungi... 455 e-126 ref|YP_002871997.1| putative transporter-like membrane protein [... 435 e-120 ref|ZP_07774888.1| undecaprenyl-diphosphatase [Pseudomonas fluor... 426 e-117 ref|ZP_08071046.1| Bacitracin resistance protein BacA [Methylocy... 378 e-103 >ref|YP_003773921.1| bacitracin resistance undecaprenol kinase 2 [Herbaspirillum seropedicae SmR1] gb|ADJ62013.1| bacitracin resistance undecaprenol kinase 2 protein [Herbaspirillum seropedicae SmR1] Length = 290 Score = 488 bits (1256), Expect = e-136, Method: Compositional matrix adjust. Identities = 256/294 (87%), Positives = 275/294 (93%), Gaps = 4/294 (1%) Query: 1 VANVCSAGLDIGFASLDYLQIGFLGVVQGITELLPISSTAHMRAQPYIVPAVLGWHDPGS 60 +ANVCSAGLDIGFASL Y QIG LG+VQGITELLPISSTAHMR IVPA+LGWHDPGS Sbjct: 1 MANVCSAGLDIGFASLSYAQIGLLGIVQGITELLPISSTAHMR----IVPALLGWHDPGS 56 Query: 61 AFSAAMQLAALAAVVSYFWRDVTAVTSGSITAWRQRDFNSPMFRLAVAIVLATIPIGIAG 120 AFSAAMQLAALAAV+SYF RDV+AVT GS+ AWR+RDFN PMFRLAVAI+LATIPIGIAG Sbjct: 57 AFSAAMQLAALAAVISYFRRDVSAVTGGSLAAWRRRDFNDPMFRLAVAIILATIPIGIAG 116 Query: 121 LVLSHVLNACGSPLRSLSVIGWSCIAMAILLAIAELVCRHRRTVDQMRLSDALIVGIAQV 180 L LSHVLNACGSPLRSL+VIGWSC+ MAILLAI+E+VCRHRR+VDQMRL DALIVG+AQV Sbjct: 117 LSLSHVLNACGSPLRSLTVIGWSCVGMAILLAISEMVCRHRRSVDQMRLRDALIVGLAQV 176 Query: 181 GALIPGVSRSGSTLTAALFLNFKREEAARFSFLLGLPAIALAGLKELAVLLHAHIPLHAW 240 GALIPGVSRSGSTLTAALFLNF+REEAARFSFLLGLPAIALAGLKELAVLLHAHIPL AW Sbjct: 177 GALIPGVSRSGSTLTAALFLNFRREEAARFSFLLGLPAIALAGLKELAVLLHAHIPLEAW 236 Query: 241 SLLLFGLLVASVSAFCAIWGLMKFLERFSTWPFIVYRAALGVFLLVAVSKGFLQ 294 +LLFGLLVASVSAF AIWGLMKFLERFSTWPFIVYRA LG FLLVAV++G+LQ Sbjct: 237 GVLLFGLLVASVSAFAAIWGLMKFLERFSTWPFIVYRAVLGAFLLVAVAQGWLQ 290 >ref|YP_004751500.1| Undecaprenyl-diphosphatase [Collimonas fungivorans Ter331] gb|AEK60677.1| Undecaprenyl-diphosphatase [Collimonas fungivorans Ter331] Length = 299 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 241/294 (81%), Positives = 262/294 (89%), Gaps = 4/294 (1%) Query: 1 VANVCSAGLDIGFASLDYLQIGFLGVVQGITELLPISSTAHMRAQPYIVPAVLGWHDPGS 60 VA VCSAG DIGFASLDY+Q+ LGV+QGI+ELLPISSTAHMR IVPA+LGWHDPGS Sbjct: 10 VAGVCSAGTDIGFASLDYVQVAILGVIQGISELLPISSTAHMR----IVPAILGWHDPGS 65 Query: 61 AFSAAMQLAALAAVVSYFWRDVTAVTSGSITAWRQRDFNSPMFRLAVAIVLATIPIGIAG 120 AFSAAMQLAALAAVVSYFWRDV VT GSI A R+R+F+SP FRL +AI+LATIPIGIAG Sbjct: 66 AFSAAMQLAALAAVVSYFWRDVREVTVGSINAVRERNFSSPSFRLGMAIILATIPIGIAG 125 Query: 121 LVLSHVLNACGSPLRSLSVIGWSCIAMAILLAIAELVCRHRRTVDQMRLSDALIVGIAQV 180 L L+ VLNACGSPLRSLSVIG++CIAM +LLAIAEL CRHRRTV +MRL DALIVG+AQV Sbjct: 126 LALAPVLNACGSPLRSLSVIGYACIAMGVLLAIAELSCRHRRTVGEMRLRDALIVGLAQV 185 Query: 181 GALIPGVSRSGSTLTAALFLNFKREEAARFSFLLGLPAIALAGLKELAVLLHAHIPLHAW 240 GALIPGVSRSGSTLTAALFLNFKREEAARFSFLLGLPAIALAGLKEL VL H H+PL W Sbjct: 186 GALIPGVSRSGSTLTAALFLNFKREEAARFSFLLGLPAIALAGLKELLVLFHLHMPLETW 245 Query: 241 SLLLFGLLVASVSAFCAIWGLMKFLERFSTWPFIVYRAALGVFLLVAVSKGFLQ 294 LL+FGL+VASVSAF AIWGLMKFLE+FSTWPFIVYR ALG+FLLVAV GFL Sbjct: 246 MLLIFGLVVASVSAFGAIWGLMKFLEKFSTWPFIVYRIALGIFLLVAVHNGFLS 299 >ref|YP_002871997.1| putative transporter-like membrane protein [Pseudomonas fluorescens SBW25] emb|CAY48626.1| putative transport-related membrane protein [Pseudomonas fluorescens SBW25] Length = 290 Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust. Identities = 233/294 (79%), Positives = 257/294 (87%), Gaps = 4/294 (1%) Query: 1 VANVCSAGLDIGFASLDYLQIGFLGVVQGITELLPISSTAHMRAQPYIVPAVLGWHDPGS 60 ++NVCSAGLD+GFASLDYLQI LGV+QGITELLP+SSTAHMR +VPA+LGW DPGS Sbjct: 1 MSNVCSAGLDVGFASLDYLQIFILGVIQGITELLPVSSTAHMR----VVPALLGWQDPGS 56 Query: 61 AFSAAMQLAALAAVVSYFWRDVTAVTSGSITAWRQRDFNSPMFRLAVAIVLATIPIGIAG 120 AFSAAMQLAALAAVVSYFWRDV VT+GSI A R+ D+N P F+LAVAIVLATIPIGIAG Sbjct: 57 AFSAAMQLAALAAVVSYFWRDVRQVTTGSIGAVRRGDYNDPWFKLAVAIVLATIPIGIAG 116 Query: 121 LVLSHVLNACGSPLRSLSVIGWSCIAMAILLAIAELVCRHRRTVDQMRLSDALIVGIAQV 180 L LS LNAC SPLR L VIG SC+ MA+LLA+AE+ RH R V +MRL DALIVGIAQ+ Sbjct: 117 LALSSTLNACNSPLRGLMVIGISCVVMAVLLAVAEVRARHTREVSEMRLRDALIVGIAQI 176 Query: 181 GALIPGVSRSGSTLTAALFLNFKREEAARFSFLLGLPAIALAGLKELAVLLHAHIPLHAW 240 GALIPGVSRSGSTLTAALFLNFKREEAARFSFLLGLPAIALAGLKEL VLLHA +P+HAW Sbjct: 177 GALIPGVSRSGSTLTAALFLNFKREEAARFSFLLGLPAIALAGLKELWVLLHADMPVHAW 236 Query: 241 SLLLFGLLVASVSAFCAIWGLMKFLERFSTWPFIVYRAALGVFLLVAVSKGFLQ 294 LLFGL+VAS+SAF AIWGLMKFLERFSTWPF++YRA LGVFL+VAVS G L Sbjct: 237 PHLLFGLVVASISAFFAIWGLMKFLERFSTWPFVIYRALLGVFLIVAVSTGLLS 290 >ref|ZP_07774888.1| undecaprenyl-diphosphatase [Pseudomonas fluorescens WH6] gb|EFQ63836.1| undecaprenyl-diphosphatase [Pseudomonas fluorescens WH6] Length = 290 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 233/294 (79%), Positives = 253/294 (86%), Gaps = 4/294 (1%) Query: 1 VANVCSAGLDIGFASLDYLQIGFLGVVQGITELLPISSTAHMRAQPYIVPAVLGWHDPGS 60 + NVCSAGLD+GFASLDYLQI LGV+QGITELLP+SSTAHMR +VPA+LGW DPGS Sbjct: 1 MTNVCSAGLDVGFASLDYLQIFILGVIQGITELLPVSSTAHMR----VVPALLGWQDPGS 56 Query: 61 AFSAAMQLAALAAVVSYFWRDVTAVTSGSITAWRQRDFNSPMFRLAVAIVLATIPIGIAG 120 AFSAAMQLAALAAVVSYFWRDV VT+GSI A R+ D+N F+LAVAIVLATIPI IAG Sbjct: 57 AFSAAMQLAALAAVVSYFWRDVRQVTTGSIGAVRRGDYNDRWFKLAVAIVLATIPICIAG 116 Query: 121 LVLSHVLNACGSPLRSLSVIGWSCIAMAILLAIAELVCRHRRTVDQMRLSDALIVGIAQV 180 LVLS LNAC SPLR L VIG +C+ MA+LLA AEL RH R V QMRL DALIVGIAQ+ Sbjct: 117 LVLSSTLNACNSPLRGLMVIGIACLVMAVLLAAAELRARHTREVGQMRLRDALIVGIAQI 176 Query: 181 GALIPGVSRSGSTLTAALFLNFKREEAARFSFLLGLPAIALAGLKELAVLLHAHIPLHAW 240 GALIPGVSRSGSTLTAALFLNFKREEAARFSFLLGLPAIALAGLKEL VLLHA +P HAW Sbjct: 177 GALIPGVSRSGSTLTAALFLNFKREEAARFSFLLGLPAIALAGLKELWVLLHADLPPHAW 236 Query: 241 SLLLFGLLVASVSAFCAIWGLMKFLERFSTWPFIVYRAALGVFLLVAVSKGFLQ 294 LLFGL+VAS+SAF AIWGLMKFLERFSTWPF++YRA LGVFL+VAVS G L Sbjct: 237 PHLLFGLVVASISAFFAIWGLMKFLERFSTWPFVIYRALLGVFLIVAVSTGLLS 290 >ref|ZP_08071046.1| Bacitracin resistance protein BacA [Methylocystis sp. ATCC 49242] gb|EFY01573.1| Bacitracin resistance protein BacA [Methylocystis sp. ATCC 49242] Length = 290 Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust. Identities = 204/293 (69%), Positives = 230/293 (78%), Gaps = 4/293 (1%) Query: 1 VANVCSAGLDIGFASLDYLQIGFLGVVQGITELLPISSTAHMRAQPYIVPAVLGWHDPGS 60 +A C+ GLD GF L Y+++ LGVVQGITELLPISSTAHMR IVPA+LGW DPGS Sbjct: 1 MATACTNGLDTGFVDLGYIKVAALGVVQGITELLPISSTAHMR----IVPALLGWKDPGS 56 Query: 61 AFSAAMQLAALAAVVSYFWRDVTAVTSGSITAWRQRDFNSPMFRLAVAIVLATIPIGIAG 120 AFSAAMQLAALAAVVSYFW D+ + GSI A R+RDFN FR + I AT+PIG+AG Sbjct: 57 AFSAAMQLAALAAVVSYFWSDIRTLAVGSIQAIRRRDFNDWTFRFVMWIGFATVPIGVAG 116 Query: 121 LVLSHVLNACGSPLRSLSVIGWSCIAMAILLAIAELVCRHRRTVDQMRLSDALIVGIAQV 180 ++LSH LN CGSPLRSL VIG SCI MA LLAIAEL C H+RT+D + L DA+IVG AQV Sbjct: 117 ILLSHTLNTCGSPLRSLPVIGISCIVMAALLAIAELYCNHKRTLDHVSLKDAMIVGFAQV 176 Query: 181 GALIPGVSRSGSTLTAALFLNFKREEAARFSFLLGLPAIALAGLKELAVLLHAHIPLHAW 240 GALIPGVSRSGSTLTAALFL+ KREEAARFSFLLGLPAIALAGLKEL L AH+ H W Sbjct: 177 GALIPGVSRSGSTLTAALFLDLKREEAARFSFLLGLPAIALAGLKELWELHKAHLDFHGW 236 Query: 241 SLLLFGLLVASVSAFCAIWGLMKFLERFSTWPFIVYRAALGVFLLVAVSKGFL 293 S+L GL VAS+SAF AIWGL++ LERFS WPF+ YR +GV LLV GFL Sbjct: 237 SVLTLGLFVASISAFVAIWGLLRILERFSAWPFVAYRGFIGVVLLVGFYAGFL 289