BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0409.p         (171 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002943091.1| aldose 1-epimerase [Variovorax paradoxus S11...   122   1e-26
ref|YP_285933.1| aldose 1-epimerase [Dechloromonas aromatica RCB...   121   4e-26
ref|YP_004153589.1| aldose 1-epimerase [Variovorax paradoxus EPS...   120   8e-26
ref|YP_004233506.1| aldose 1-epimerase [Acidovorax avenae subsp....   120   1e-25
ref|ZP_08503673.1| hypothetical protein METUNv1_00678 [Methylove...   119   2e-25

>ref|YP_002943091.1| aldose 1-epimerase [Variovorax paradoxus S110]
 gb|ACS17825.1| Aldose 1-epimerase [Variovorax paradoxus S110]
          Length = 278

 Score =  122 bits (307), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/133 (48%), Positives = 83/133 (62%), Gaps = 7/133 (5%)

Query: 13  LQLHNAHGDSAVISLYGAQLLSWQSADGREHLYCTPEPSLKAGASIRGGVPVCFPQFSGR 72
           L+   A G +  ++L+GAQLLSW +ADG E LY +P       A+IRGGVP+C PQF+ R
Sbjct: 14  LRAAGADGGAFTVALHGAQLLSWTTADGTERLYLSPSAVFDGQAAIRGGVPICCPQFNQR 73

Query: 73  GALPKHGLVRNLVWQVDG-DILSGADQDVACARLSLSDSDATRALWPHSFALQLQIELGA 131
           G LPKHG +RNL W+  G D  SG         L L DS+ATR LWPH+F  +LQI + A
Sbjct: 74  GMLPKHGFMRNLPWENRGIDATSGE------LTLRLRDSEATRRLWPHAFEARLQIGMAA 127

Query: 132 GWVSIAFNVTNTG 144
           G +  A  + NTG
Sbjct: 128 GRLRTALTLLNTG 140


>ref|YP_285933.1| aldose 1-epimerase [Dechloromonas aromatica RCB]
 gb|AAZ47463.1| Aldose 1-epimerase [Dechloromonas aromatica RCB]
          Length = 281

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 62/133 (46%), Positives = 80/133 (60%), Gaps = 3/133 (2%)

Query: 13  LQLHNAHGDSAVISLYGAQLLSWQSADGREHLYCTPEPSLKAGASIRGGVPVCFPQFSGR 72
           L+L+   G SA++S  GAQLLSW SADGRE L+ + +       +IRGGVPVCFPQFS  
Sbjct: 16  LRLNGPRGVSAIVSKQGAQLLSWVSADGRERLFLSDKAVFDGSVAIRGGVPVCFPQFSSL 75

Query: 73  GALPKHGLVRNLVWQVDGDILSGADQDVACARLSLSDSDATRALWPHSFALQLQIELGAG 132
           G LPKHG +R   W V          D A   L  +D ++TR+LWPHSF  +L + L A 
Sbjct: 76  GDLPKHGFLRTRSWSVS---TRRTGDDYALVTLECADDESTRSLWPHSFLAELTVMLEAD 132

Query: 133 WVSIAFNVTNTGA 145
            + +   VTNTG+
Sbjct: 133 RIDLELAVTNTGS 145


>ref|YP_004153589.1| aldose 1-epimerase [Variovorax paradoxus EPS]
 gb|ADU35478.1| Aldose 1-epimerase [Variovorax paradoxus EPS]
          Length = 278

 Score =  120 bits (300), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 60/125 (48%), Positives = 79/125 (63%), Gaps = 5/125 (4%)

Query: 18  AHGDSAVISLYGAQLLSWQSADGREHLYCTPEPSLKAGASIRGGVPVCFPQFSGRGALPK 77
           A G +  ++L+GAQ+LSW +ADG E  Y +P        +IRGGVPVC PQF+ RG LPK
Sbjct: 19  ADGSTLTVALHGAQVLSWTTADGVERFYVSPRAVFDGKTAIRGGVPVCCPQFNMRGMLPK 78

Query: 78  HGLVRNLVWQVDGDILSGADQDVACARLSLSDSDATRALWPHSFALQLQIELGAGWVSIA 137
           HG +RNL W+  G   +GA  D    R  L D++ATRALWPH+F  +L + L  G + IA
Sbjct: 79  HGFMRNLPWESQG---TGASGDTLALR--LRDNEATRALWPHAFEARLDVTLAPGQLRIA 133

Query: 138 FNVTN 142
             +TN
Sbjct: 134 LTLTN 138


>ref|YP_004233506.1| aldose 1-epimerase [Acidovorax avenae subsp. avenae ATCC 19860]
 gb|ADX44939.1| Aldose 1-epimerase [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 287

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 59/139 (42%), Positives = 88/139 (63%), Gaps = 4/139 (2%)

Query: 6   LPDVAGLLQLHNAHGDSAVISLYGAQLLSWQSADGREHLYCTPEPSLKAGASIRGGVPVC 65
            PD+  + +LHN    +A ++  GAQ+LSW +ADG E L+ +P  +     +IRGGVPVC
Sbjct: 16  FPDLPAV-RLHNPRSGAATVAFQGAQVLSWTTADGVERLFLSPRSAHDGHTAIRGGVPVC 74

Query: 66  FPQFSGRGALPKHGLVRNLVWQVDGDILSGADQDVACARLSLSDSDATRALWPHSFALQL 125
            PQF+ RGALPKHG +RNL W++   +   ++  V  A ++L D +ATRA+WPH+F   L
Sbjct: 75  CPQFNQRGALPKHGFMRNLPWKL---VSESSNGHVTGAVMALGDDEATRAIWPHAFQALL 131

Query: 126 QIELGAGWVSIAFNVTNTG 144
            +EL    + ++  + NTG
Sbjct: 132 SVELSGDALRVSLTLRNTG 150


>ref|ZP_08503673.1| hypothetical protein METUNv1_00678 [Methyloversatilis universalis
           FAM5]
 gb|EGK72849.1| hypothetical protein METUNv1_00678 [Methyloversatilis universalis
           FAM5]
          Length = 285

 Score =  119 bits (298), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/132 (46%), Positives = 79/132 (59%), Gaps = 3/132 (2%)

Query: 13  LQLHNAHGDSAVISLYGAQLLSWQSADGREHLYCTPEPSLKAGASIRGGVPVCFPQFSGR 72
           L+L    G   +ISL+G QLLSW  A G E LY +P       +++RGG+PV FPQF+ R
Sbjct: 19  LELTAPDGARCLISLFGGQLLSWIPAGGSERLYLSPAAHFDGRSAVRGGIPVIFPQFAER 78

Query: 73  GALPKHGLVRNLVWQVDGDILSGADQDVACARLSLSDSDATRALWPHSFALQLQIELGAG 132
           G  P+HG  R  VWQVD   +S   +D A A L L   DATRALWPH FAL+L + +   
Sbjct: 79  GNGPRHGFARTRVWQVDESRVS---KDFATATLRLVTDDATRALWPHDFALELTVVVSGN 135

Query: 133 WVSIAFNVTNTG 144
            + +  +V NTG
Sbjct: 136 RLDLELDVENTG 147