BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0398.p         (156 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001614764.1| cytosine/adenosine deaminase [Sorangium cell...   152   2e-35
ref|YP_002782244.1| deaminase [Rhodococcus opacus B4] >gi|226242...   121   4e-26
ref|YP_704930.1| guanine deaminase [Rhodococcus jostii RHA1] >gi...   119   1e-25
ref|XP_003048181.1| hypothetical protein NECHADRAFT_93328 [Nectr...   106   1e-21
emb|CBL05905.1| Cytosine/adenosine deaminases [Megamonas hyperme...   105   2e-21

>ref|YP_001614764.1| cytosine/adenosine deaminase [Sorangium cellulosum 'So ce 56']
 emb|CAN94284.1| cytosine/adenosine deaminase [Sorangium cellulosum 'So ce 56']
          Length = 163

 Score =  152 bits (383), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/149 (54%), Positives = 104/149 (69%), Gaps = 5/149 (3%)

Query: 7   DSKAMRLAIEASGEALANGDMPFGATLVSAQGEILLISANNQNSA----ADCTGHAEMVL 62
           D+  M+LA++AS +AL  G+MPFGA LV   G++L +S N + +A     DCT HAE++L
Sbjct: 10  DAGFMQLAVDASSDALRAGNMPFGAVLVQG-GQVLQVSCNQRRTANAGEGDCTAHAEVML 68

Query: 63  VRTAQKQLGLGALRGSTVYASGEPCAMCCGAMFWGGVRRVVYAASTAQIAEALGGPLLPL 122
           +R A    G  AL G TVYASGEPCAMC GA+FW GV R+VYAAST  I   LGG  LP+
Sbjct: 69  IREATAAHGPEALAGGTVYASGEPCAMCSGALFWAGVSRIVYAASTPDIIAVLGGRALPV 128

Query: 123 RSAEVLAAATPAMTVDGPLMGDEAFAVLR 151
           R  EVLA A+PA+ VDGP++ + A A+LR
Sbjct: 129 RCHEVLANASPAVRVDGPILREAAVALLR 157


>ref|YP_002782244.1| deaminase [Rhodococcus opacus B4]
 dbj|BAH53299.1| putative deaminase [Rhodococcus opacus B4]
          Length = 161

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 69/151 (45%), Positives = 90/151 (59%), Gaps = 1/151 (0%)

Query: 4   NDSDSKAMRLAIEASGEALANGDMPFGATLVSAQGEILLISANNQNSAADCTGHAEMVLV 63
           +D D   +R AIE + E    G+ PFGA  V A G ++   AN+  ++AD T HAE+  +
Sbjct: 7   DDVDLAHLRRAIELADETGDAGNRPFGAVAVGADGHVISEGANSVATSADVTEHAELDAI 66

Query: 64  RTAQKQLGLGALRGSTVYASGEPCAMCCGAMFWGGVRRVVYAASTAQIAEAL-GGPLLPL 122
            TA  +   G L G+T+YASGEPC MC  AM W G+ RVVYAAS+A  +  L  GP   L
Sbjct: 67  TTACGEGRTGDLVGATMYASGEPCPMCSAAMVWAGITRVVYAASSADFSRILPDGPRFTL 126

Query: 123 RSAEVLAAATPAMTVDGPLMGDEAFAVLRRF 153
             A+VL AA+  + V GP +GDEA A   RF
Sbjct: 127 GCADVLDAASVEIQVSGPHLGDEALAPFHRF 157


>ref|YP_704930.1| guanine deaminase [Rhodococcus jostii RHA1]
 gb|ABG96772.1| possible guanine deaminase [Rhodococcus jostii RHA1]
          Length = 161

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 67/151 (44%), Positives = 90/151 (59%), Gaps = 1/151 (0%)

Query: 4   NDSDSKAMRLAIEASGEALANGDMPFGATLVSAQGEILLISANNQNSAADCTGHAEMVLV 63
           +D D   +R AIE + E    G+ PFGA  V A G ++   AN+  ++AD T HAE+  +
Sbjct: 7   DDVDLAHLRRAIELADETGDAGNRPFGAVAVGADGHVISEGANSVATSADVTEHAELDAI 66

Query: 64  RTAQKQLGLGALRGSTVYASGEPCAMCCGAMFWGGVRRVVYAASTAQIAEAL-GGPLLPL 122
            TA  +   G L G+T+YASGEPC MC  AM W G+ RVVYAAS+A  +  L  GP   L
Sbjct: 67  TTACGEGRTGDLVGATMYASGEPCPMCSAAMVWAGITRVVYAASSADFSRILPDGPRFTL 126

Query: 123 RSAEVLAAATPAMTVDGPLMGDEAFAVLRRF 153
             ++VL +A+  + V GP +GDEA A   RF
Sbjct: 127 GCSDVLESASVEIEVSGPHLGDEALAPFHRF 157


>ref|XP_003048181.1| hypothetical protein NECHADRAFT_93328 [Nectria haematococca mpVI
           77-13-4]
 gb|EEU42468.1| hypothetical protein NECHADRAFT_93328 [Nectria haematococca mpVI
           77-13-4]
          Length = 166

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/146 (41%), Positives = 82/146 (56%), Gaps = 10/146 (6%)

Query: 4   NDSDSKAMRLAIEASGEALANGDMPFGATLVSAQGEILLISANNQNSAADCTGHAEMVLV 63
           ND D + +RLA+  + EAL  GD PFG+ LVSA G++L    N + + +D T H E  L 
Sbjct: 3   NDKDIQHLRLAVSLAREALQAGDFPFGSVLVSASGKVLQTDRNRETTGSDSTLHPEFTLA 62

Query: 64  RTAQKQLGLGALRGSTVYASGEPCAMCCGAMFWGGVRRVVYAASTAQIA---EALG---G 117
           R A++ L       STVY SGE CAMC  A  W G+ R+VYA+ST Q+    +  G    
Sbjct: 63  RWAEQNLSPTERAESTVYTSGEHCAMCSAAHAWCGLGRIVYASSTEQLGAWRDEYGIGKS 122

Query: 118 PLLPLRSAEVLAAATPAMTVDGPLMG 143
           P+ PL   +V     P + V+GP+ G
Sbjct: 123 PVSPLSIQQV----APGIQVEGPVEG 144


>emb|CBL05905.1| Cytosine/adenosine deaminases [Megamonas hypermegale ART12/1]
          Length = 158

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 4/135 (2%)

Query: 11  MRLAIEASGEALANGDMPFGATLVSAQGEILLISANNQNSAADCTGHAEMVLVRTAQKQL 70
           +R AIE S ++  +G+ PFGA LV  +G ILL   N + + ++C+GHAE  L+  A K+ 
Sbjct: 7   LRKAIEVSKKSREHGNTPFGAILVDGEGNILLEQENIEITESNCSGHAETSLMIKASKKY 66

Query: 71  GLGALRGSTVYASGEPCAMCCGAMFWGGVRRVVYAASTAQIAEALG----GPLLPLRSAE 126
               L   T+Y++ EPCAMC GA++WG V +VVY  S  ++ E  G     P   L   E
Sbjct: 67  SKDFLWNCTLYSTAEPCAMCAGAIYWGNVGKVVYGISEKRLLELTGDDEQNPTFDLPCRE 126

Query: 127 VLAAATPAMTVDGPL 141
           V A     + V+GP 
Sbjct: 127 VFARGQKDIKVEGPF 141