BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0002.0393.p         (125 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001890828.1| hypothetical protein Bphyt_7171 [Burkholderi...   167   4e-40
ref|ZP_08503652.1| hypothetical protein METUNv1_00656 [Methylove...   166   2e-39
ref|YP_001860349.1| hypothetical protein Bphy_4182 [Burkholderia...   165   2e-39
ref|YP_003744008.1| hypothetical protein RCFBP_10036 [Ralstonia ...   163   6e-39
ref|YP_003773943.1| pyrophosphatase [Herbaspirillum seropedicae ...   159   1e-37

>ref|YP_001890828.1| hypothetical protein Bphyt_7171 [Burkholderia phytofirmans PsJN]
 gb|ACD21457.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN]
          Length = 123

 Score =  167 bits (424), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 75/114 (65%), Positives = 97/114 (85%)

Query: 12  SDLAALRDIVRQFAEERDWQQFHTPKNLAMALSVEVAELVEHFQWLKTGEQDELDDARRT 71
           +DL  LR+++R+F  ERDW +FHTPKNLA ALSVE +EL+E FQWL +G++ ELD+A+ T
Sbjct: 8   NDLLELRELIRKFVSERDWDKFHTPKNLATALSVEASELLEPFQWLVSGDKSELDEAKET 67

Query: 72  GVRHELADSLVYLIRLADRLDVDLYDAVIEKMQLNREKYPADKVRGQSRKYDQY 125
            +RHE+AD LVYL+RLAD++DVDL+ AV+EKM LNR+KYPADKVRG SRKY +Y
Sbjct: 68  AIRHEMADVLVYLVRLADKMDVDLFQAVLEKMALNRQKYPADKVRGDSRKYSEY 121


>ref|ZP_08503652.1| hypothetical protein METUNv1_00656 [Methyloversatilis universalis
           FAM5]
 gb|EGK72828.1| hypothetical protein METUNv1_00656 [Methyloversatilis universalis
           FAM5]
          Length = 120

 Score =  166 bits (419), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 82/120 (68%), Positives = 96/120 (80%), Gaps = 2/120 (1%)

Query: 6   PSPTPSSDLAALRDIVRQFAEERDWQQFHTPKNLAMALSVEVAELVEHFQWLKTGEQDEL 65
           P    ++ L  LRD+VRQF +ERDW QFHTPKNLAMA+S+E AE++EHFQWL TG   EL
Sbjct: 2   PHDADTARLDRLRDLVRQFVDERDWAQFHTPKNLAMAMSIEAAEVMEHFQWLPTGR--EL 59

Query: 66  DDARRTGVRHELADSLVYLIRLADRLDVDLYDAVIEKMQLNREKYPADKVRGQSRKYDQY 125
            D +RT V HELAD LVYL+RLAD LD+DL  AV EKMQLNREKYPAD+VRG +RKYD+Y
Sbjct: 60  ADDKRTAVGHELADVLVYLVRLADVLDIDLPAAVAEKMQLNREKYPADRVRGDARKYDEY 119


>ref|YP_001860349.1| hypothetical protein Bphy_4182 [Burkholderia phymatum STM815]
 gb|ACC73303.1| conserved hypothetical protein [Burkholderia phymatum STM815]
          Length = 122

 Score =  165 bits (418), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 76/115 (66%), Positives = 96/115 (83%)

Query: 11  SSDLAALRDIVRQFAEERDWQQFHTPKNLAMALSVEVAELVEHFQWLKTGEQDELDDARR 70
           S+DL A+RD++RQF  ERDW +FH+PKNLA ALSVE +EL+E FQWL++GE+ EL D + 
Sbjct: 6   SNDLVAVRDLLRQFVSERDWSRFHSPKNLATALSVEASELLEPFQWLQSGEKSELADDKL 65

Query: 71  TGVRHELADSLVYLIRLADRLDVDLYDAVIEKMQLNREKYPADKVRGQSRKYDQY 125
           T +RHE+AD L YL+ LADRLDVDLY AV+EK++LNR +YPADKVRG SRKY +Y
Sbjct: 66  TAIRHEMADVLAYLVMLADRLDVDLYAAVLEKIELNRARYPADKVRGDSRKYSEY 120


>ref|YP_003744008.1| hypothetical protein RCFBP_10036 [Ralstonia solanacearum CFBP2957]
 emb|CAQ17794.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
 emb|CBJ41354.1| conserved protein of unknown function [Ralstonia solanacearum
           CFBP2957]
          Length = 134

 Score =  163 bits (413), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 77/117 (65%), Positives = 97/117 (82%)

Query: 9   TPSSDLAALRDIVRQFAEERDWQQFHTPKNLAMALSVEVAELVEHFQWLKTGEQDELDDA 68
           T  SDL ALRD+VR+F  ERDW++FHTPKNLA+ALSVE +EL+E FQWL +G++ EL +A
Sbjct: 5   TDRSDLVALRDLVREFVRERDWEKFHTPKNLAIALSVEASELLEPFQWLVSGDRLELGEA 64

Query: 69  RRTGVRHELADSLVYLIRLADRLDVDLYDAVIEKMQLNREKYPADKVRGQSRKYDQY 125
           R T VRHE+AD LVYL+ LAD+L+VDL+ AV EKM +NR KYPA+KVRG +RKY +Y
Sbjct: 65  RMTAVRHEMADVLVYLLSLADKLNVDLFQAVQEKMDINRAKYPAEKVRGDARKYSEY 121


>ref|YP_003773943.1| pyrophosphatase [Herbaspirillum seropedicae SmR1]
 gb|ADJ62035.1| pyrophosphatase protein [Herbaspirillum seropedicae SmR1]
          Length = 137

 Score =  159 bits (402), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 77/118 (65%), Positives = 89/118 (75%)

Query: 5   SPSPTPSSDLAALRDIVRQFAEERDWQQFHTPKNLAMALSVEVAELVEHFQWLKTGEQDE 64
           + S  P SDL  LR ++RQF  ERDW +FHTPKNLAMALSVEVAEL+EHFQWL TG   E
Sbjct: 4   ATSAAPISDLHELRVMIRQFCSERDWLRFHTPKNLAMALSVEVAELLEHFQWLPTGADHE 63

Query: 65  LDDARRTGVRHELADSLVYLIRLADRLDVDLYDAVIEKMQLNREKYPADKVRGQSRKY 122
           LDDA R G+RHE+AD LVYLI+LAD   VDL  AV+EKMQLN  KYP +  R ++ KY
Sbjct: 64  LDDAAREGIRHEMADVLVYLIQLADHTGVDLRSAVLEKMQLNARKYPVELARCKADKY 121