BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0392.p (268 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08404851.1| MipA family MltA-interacting protein [Hylemon... 183 2e-44 ref|YP_002260998.1| cog3713, mipa like outer membrane protein v ... 170 2e-40 emb|CAQ17703.1| cog3713, mipa like outer membrane protein v [Ral... 169 3e-40 emb|CBJ36544.1| conserved exported protein of unknown function [... 169 4e-40 gb|AEG67734.1| MltA-interacting MipA family protein [Ralstonia s... 169 5e-40 >ref|ZP_08404851.1| MipA family MltA-interacting protein [Hylemonella gracilis ATCC 19624] gb|EGI77994.1| MipA family MltA-interacting protein [Hylemonella gracilis ATCC 19624] Length = 261 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 94/238 (39%), Positives = 139/238 (58%) Query: 31 AAGSETKITLGLGAAYMPRYAGSDEYKAIALPVISVVTPWGGFIDAGEGIGYRHGFGDKF 90 AA +E + L PRY GS +Y+ + +P+I+ G F++ EG+GYR F Sbjct: 24 AAQAENVYLMSLAGGVTPRYEGSRDYRPVVVPIIAAEFDNGVFLNPLEGLGYRTQFSHGV 83 Query: 91 IASAALGYDAGRKDSNQSLKPGSDKLRGMGEVKGATLLNLSLGYRLTQNLTLSAGASQPL 150 AS ALGYD GR D ++ L PGSD L+GMG++ G+ L+ L +G RL +L+LSA QP+ Sbjct: 84 FASVALGYDDGRTDQDRYLLPGSDHLKGMGDIPGSMLILLQVGVRLPGDLSLSATLDQPI 143 Query: 151 SNRDRGRNYYAKVDATVMTMPRDKLAVAGSALFGSNDYNQSYFGVTANQSATSGYKKYTP 210 + RG + A++ +MP D++ + GS GS+ Y Q++FGVT QS S + YTP Sbjct: 144 TETRRGLGGRVDLTASLWSMPTDQVNLTGSVHAGSDRYAQTFFGVTDRQSVNSRFDAYTP 203 Query: 211 GSGLYAVKAAITWTHRFDDNWSLLAATEATRYMTKAGDSPIVKARTNYGTMAAVNYTF 268 G+ ++K AI WTH F +W + +R + A DSPIV+ + NY M A+ Y + Sbjct: 204 QGGVDSLKLAIDWTHVFTPHWMVRTTAGVSRLVGDAADSPIVQVKNNYLAMTALVYRY 261 >ref|YP_002260998.1| cog3713, mipa like outer membrane protein v [Ralstonia solanacearum IPO1609] emb|CAQ62939.1| cog3713, mipa like outer membrane protein v [Ralstonia solanacearum IPO1609] Length = 261 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 105/262 (40%), Positives = 138/262 (52%), Gaps = 12/262 (4%) Query: 17 RRRVAIPA---------SAQQTAAAGSETKITLGLGAAYMPRYAGSDEYKAIALPVISVV 67 R+R++I S Q AA E+ +L L A PRY GS +Y +P Sbjct: 2 RKRLSISCLALLPGIWLSPSQVLAA--ESSYSLSLNAGVTPRYQGSKQYTVTVMPGFRAE 59 Query: 68 TPWGGFIDAGEG-IGYRHGFGDKFIASAALGYDAGRKDSNQSLKPGSDKLRGMGEVKGAT 126 G FID G GY F + ASAA+ YD GR D N+ +PGSD LRGMG VKG+ Sbjct: 60 FGNGFFIDPTRGGAGYAMRFANGMFASAAVSYDPGRADENRYGRPGSDDLRGMGSVKGSL 119 Query: 127 LLNLSLGYRLTQNLTLSAGASQPLSNRDRGRNYYAKVDATVMTMPRDKLAVAGSALFGSN 186 L ++G R+ T SA P+SNRDRG + + V A V + +K+ V+ S FGS Sbjct: 120 LGAFTVGGRIVGETTASATLEVPISNRDRGWSAHVDVAAPVYSWGANKITVSPSLYFGSR 179 Query: 187 DYNQSYFGVTANQSATSGYKKYTPGSGLYAVKAAITWTHRFDDNWSLLAATEATRYMTKA 246 Y Q+YFGVT Q+A SG+ YT SGL A + W H F NW++ AA TR + A Sbjct: 180 KYMQTYFGVTPQQAADSGFAPYTADSGLQAASLTVAWKHTFSRNWAMQAAVGTTRLLGNA 239 Query: 247 GDSPIVKARTNYGTMAAVNYTF 268 SPIV+ + +Y + YTF Sbjct: 240 AKSPIVQNKQSYFGGTGIVYTF 261 >emb|CAQ17703.1| cog3713, mipa like outer membrane protein v [Ralstonia solanacearum MolK2] Length = 261 Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 105/262 (40%), Positives = 138/262 (52%), Gaps = 12/262 (4%) Query: 17 RRRVAIPA---------SAQQTAAAGSETKITLGLGAAYMPRYAGSDEYKAIALPVISVV 67 R+R++I S Q AA E+ +L L A PRY GS +Y +P Sbjct: 2 RKRLSISCLALLPGIWLSPSQVLAA--ESSYSLSLNAGVTPRYQGSKQYTVTVMPGFRAE 59 Query: 68 TPWGGFIDAGEG-IGYRHGFGDKFIASAALGYDAGRKDSNQSLKPGSDKLRGMGEVKGAT 126 G FID G GY F + ASAA+ YD GR D N+ +PGSD LRGMG VKG+ Sbjct: 60 FGNGFFIDPTRGGAGYAMRFANGMFASAAVSYDPGRADENRYGRPGSDDLRGMGSVKGSL 119 Query: 127 LLNLSLGYRLTQNLTLSAGASQPLSNRDRGRNYYAKVDATVMTMPRDKLAVAGSALFGSN 186 L ++G R+ T SA P+SNRDRG + + V A V + +K+ V+ S FGS Sbjct: 120 LGAFTVGGRIVGETTASATLEVPISNRDRGWSAHLDVAAPVYSWGANKITVSPSLYFGSR 179 Query: 187 DYNQSYFGVTANQSATSGYKKYTPGSGLYAVKAAITWTHRFDDNWSLLAATEATRYMTKA 246 Y Q+YFGVT Q+A SG+ YT SGL A + W H F NW++ AA TR + A Sbjct: 180 KYMQTYFGVTPQQAADSGFAPYTADSGLQAASLTVAWKHTFSRNWAMQAAVGTTRLLGNA 239 Query: 247 GDSPIVKARTNYGTMAAVNYTF 268 SPIV+ + +Y + YTF Sbjct: 240 AKSPIVQNKQSYFGGTGIVYTF 261 >emb|CBJ36544.1| conserved exported protein of unknown function [Ralstonia solanacearum CMR15] Length = 261 Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 97/236 (41%), Positives = 126/236 (53%), Gaps = 1/236 (0%) Query: 34 SETKITLGLGAAYMPRYAGSDEYKAIALPVISVVTPWGGFIDAGEG-IGYRHGFGDKFIA 92 +E ++ L A MPRY GS Y A +P G FID G GY F + A Sbjct: 26 AEPSYSVSLNAGVMPRYQGSKHYTATVMPGFRADFGNGFFIDPTRGGAGYNMRFANGMFA 85 Query: 93 SAALGYDAGRKDSNQSLKPGSDKLRGMGEVKGATLLNLSLGYRLTQNLTLSAGASQPLSN 152 SAA+ YD GR D N+ +PGSD LRGMG +KG+ L ++G R+ T SA P+SN Sbjct: 86 SAAVSYDPGRADENRYGRPGSDDLRGMGNIKGSLLGVFTVGSRIVGETTASATLELPISN 145 Query: 153 RDRGRNYYAKVDATVMTMPRDKLAVAGSALFGSNDYNQSYFGVTANQSATSGYKKYTPGS 212 RDRG + + + A V + DK+ V+ S FGS Y Q+YFGVT QSA SG+ YT S Sbjct: 146 RDRGWSAHVDLAAPVYSQGADKITVSPSLHFGSRKYMQTYFGVTPQQSADSGFAPYTADS 205 Query: 213 GLYAVKAAITWTHRFDDNWSLLAATEATRYMTKAGDSPIVKARTNYGTMAAVNYTF 268 GL A + W H F W++ A TR + A SPIV+ + Y + YTF Sbjct: 206 GLQAASLTVAWKHTFSRQWAVQTAVGTTRLLGNAAKSPIVQNKQGYFAGTGIVYTF 261 >gb|AEG67734.1| MltA-interacting MipA family protein [Ralstonia solanacearum Po82] Length = 261 Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 97/236 (41%), Positives = 129/236 (54%), Gaps = 1/236 (0%) Query: 34 SETKITLGLGAAYMPRYAGSDEYKAIALPVISVVTPWGGFIDAGEG-IGYRHGFGDKFIA 92 +E+ +L L A PRY GS +Y +P G FID G GY F + A Sbjct: 26 AESSYSLSLNAGVAPRYQGSKQYTVTVMPSFRAEFGNGFFIDPTRGGAGYATRFANGMFA 85 Query: 93 SAALGYDAGRKDSNQSLKPGSDKLRGMGEVKGATLLNLSLGYRLTQNLTLSAGASQPLSN 152 SAA+ YD GR D N+ +PGSD LRGMG VKG+ L ++G R+ T SA P+SN Sbjct: 86 SAAVSYDPGRADENRYGRPGSDDLRGMGSVKGSLLGAFTVGGRIIGETTASATLEVPISN 145 Query: 153 RDRGRNYYAKVDATVMTMPRDKLAVAGSALFGSNDYNQSYFGVTANQSATSGYKKYTPGS 212 RDRG + + V A V + +++ V+ S FGS Y Q+YFGVT Q+A SG+ YT S Sbjct: 146 RDRGWSAHVDVAAPVYSWGANRITVSPSLSFGSRKYMQTYFGVTPQQAANSGFAPYTADS 205 Query: 213 GLYAVKAAITWTHRFDDNWSLLAATEATRYMTKAGDSPIVKARTNYGTMAAVNYTF 268 GL A + W H F NW++ AA TR + A SPIV+ + +Y + YTF Sbjct: 206 GLQAAALTVAWKHTFSRNWAMQAAVGTTRLLGNAAKSPIVQNKQSYFGGTGIVYTF 261