BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0370.p (226 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004750679.1| hypothetical protein CFU_0017 [Collimonas fu... 352 2e-95 ref|YP_002948147.1| hypothetical protein Vapar_6318 [Variovorax ... 350 7e-95 ref|YP_546947.1| hypothetical protein Bpro_0082 [Polaromonas sp.... 348 3e-94 ref|YP_004156727.1| hypothetical protein Varpa_4448 [Variovorax ... 344 6e-93 ref|YP_001022796.1| hypothetical protein Mpe_A3608 [Methylibium ... 328 4e-88 >ref|YP_004750679.1| hypothetical protein CFU_0017 [Collimonas fungivorans Ter331] gb|AEK59856.1| hypothetical protein CFU_0017 [Collimonas fungivorans Ter331] Length = 228 Score = 352 bits (903), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 175/228 (76%), Positives = 191/228 (83%), Gaps = 2/228 (0%) Query: 1 MTSNTTL--KTKPEAGVHAAEIVREYGPFPGVERVHGVTWDGSNVWAATGASLIAFDPAS 58 MT ++ K KP+A AEIVREYGPF GV +V GVT DG VWAATGA LIAFDP S Sbjct: 1 MTRKASMPSKDKPQAKARMAEIVREYGPFAGVNQVAGVTHDGQRVWAATGARLIAFDPDS 60 Query: 59 GDATRTLQRACDAGTAFDGTYLYQIAEQRIDKIDPASGKVLASIPAPGQGFDSGLTWAEG 118 G+ TR L CDAGTAFDGT+LYQIAEQRIDKIDPASGKVLASIPAPG G DSG+ WAEG Sbjct: 61 GEQTRVLDCPCDAGTAFDGTHLYQIAEQRIDKIDPASGKVLASIPAPGHGNDSGMAWAEG 120 Query: 119 SLWVGQYRDRKIHQIDPATGKLIRSIDSNRFVTGVTWVDGELWHGTWEGEESEIRRIDPA 178 SLWVGQ+RDRKIHQIDPATG ++R+I+SNRFVTGVTWVDGELWHGTWEG+ESEIRRIDP Sbjct: 121 SLWVGQHRDRKIHQIDPATGAILRTIESNRFVTGVTWVDGELWHGTWEGDESEIRRIDPD 180 Query: 179 SGAVIERLAMPRDTGVSGLESNGADLFYCGGGASGKVRAVRRPKGAAA 226 SGAV+ERL MP VSGLES+GA LFYCGGG SGKVRAVRRPK A + Sbjct: 181 SGAVLERLEMPPGANVSGLESDGAGLFYCGGGGSGKVRAVRRPKAAVS 228 >ref|YP_002948147.1| hypothetical protein Vapar_6318 [Variovorax paradoxus S110] gb|ACS22881.1| conserved hypothetical protein [Variovorax paradoxus S110] Length = 227 Score = 350 bits (899), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 172/225 (76%), Positives = 187/225 (83%) Query: 2 TSNTTLKTKPEAGVHAAEIVREYGPFPGVERVHGVTWDGSNVWAATGASLIAFDPASGDA 61 +S + K K EA AEIVREYGPF G V GVT DG VWAATGA L+AFDPASG+ Sbjct: 3 SSKASKKDKTEAAPRTAEIVREYGPFAGAASVAGVTHDGERVWAATGAQLVAFDPASGET 62 Query: 62 TRTLQRACDAGTAFDGTYLYQIAEQRIDKIDPASGKVLASIPAPGQGFDSGLTWAEGSLW 121 TRTL ACDAGTAFDGTY YQIAE RIDKIDPASGKVLASIP PG G DSGLTWAEGSLW Sbjct: 63 TRTLDCACDAGTAFDGTYFYQIAEARIDKIDPASGKVLASIPTPGHGGDSGLTWAEGSLW 122 Query: 122 VGQYRDRKIHQIDPATGKLIRSIDSNRFVTGVTWVDGELWHGTWEGEESEIRRIDPASGA 181 +GQYRDRKI QIDP +G ++R+I+SNRFVTGVTWVDGELWH TWEG+ESE+RR+DP SGA Sbjct: 123 IGQYRDRKILQIDPVSGAVLRTIESNRFVTGVTWVDGELWHATWEGDESELRRVDPDSGA 182 Query: 182 VIERLAMPRDTGVSGLESNGADLFYCGGGASGKVRAVRRPKGAAA 226 V+ERL MPR VSGLES+GADLFYCGGG SGKVRAVRRPK A A Sbjct: 183 VLERLEMPRGANVSGLESDGADLFYCGGGGSGKVRAVRRPKAARA 227 >ref|YP_546947.1| hypothetical protein Bpro_0082 [Polaromonas sp. JS666] gb|ABE42049.1| conserved hypothetical protein [Polaromonas sp. JS666] Length = 222 Score = 348 bits (894), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 174/222 (78%), Positives = 189/222 (85%), Gaps = 1/222 (0%) Query: 3 SNTTLKTKPEAGVHAAEIVREYGPFPGVERVHGVTWDGSNVWAATGASLIAFDPASGDAT 62 + TL KPE AEIVREYG FPGV V GVT DG VWAATGA LIAFDPASG+ T Sbjct: 2 TRKTLNDKPEVKARPAEIVREYG-FPGVNDVAGVTHDGQRVWAATGAKLIAFDPASGEQT 60 Query: 63 RTLQRACDAGTAFDGTYLYQIAEQRIDKIDPASGKVLASIPAPGQGFDSGLTWAEGSLWV 122 RTL+ A DAGTAFDGT+LYQIAE RIDKIDPA+GKV+A+IPAPG G DSGLTWAEGSLWV Sbjct: 61 RTLECAGDAGTAFDGTHLYQIAETRIDKIDPATGKVVATIPAPGSGSDSGLTWAEGSLWV 120 Query: 123 GQYRDRKIHQIDPATGKLIRSIDSNRFVTGVTWVDGELWHGTWEGEESEIRRIDPASGAV 182 GQYRDRKIHQ+DP TG + R+I+SNRFVTGVTWVDGELWHGTWEG++SEIRRIDP SGAV Sbjct: 121 GQYRDRKIHQVDPKTGAIQRTIESNRFVTGVTWVDGELWHGTWEGDDSEIRRIDPQSGAV 180 Query: 183 IERLAMPRDTGVSGLESNGADLFYCGGGASGKVRAVRRPKGA 224 +ERL MP GVSGLES+GADLFYCGGG SGKVRAVRRPK A Sbjct: 181 LERLEMPHGVGVSGLESDGADLFYCGGGKSGKVRAVRRPKAA 222 >ref|YP_004156727.1| hypothetical protein Varpa_4448 [Variovorax paradoxus EPS] gb|ADU38616.1| hypothetical protein Varpa_4448 [Variovorax paradoxus EPS] Length = 225 Score = 344 bits (883), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 164/215 (76%), Positives = 186/215 (86%) Query: 12 EAGVHAAEIVREYGPFPGVERVHGVTWDGSNVWAATGASLIAFDPASGDATRTLQRACDA 71 ++ V AE+VREYGPF GV++V GVT DG VWAATGA LIAFDP SG+ TRTL RA DA Sbjct: 11 QSAVRMAEVVREYGPFDGVDKVGGVTHDGQRVWAATGARLIAFDPKSGEQTRTLDRAADA 70 Query: 72 GTAFDGTYLYQIAEQRIDKIDPASGKVLASIPAPGQGFDSGLTWAEGSLWVGQYRDRKIH 131 GTAFDG +LYQIAE+RIDKIDPA+G VL SIPAPG G DSGLTWAEGSLWVGQYRDRKIH Sbjct: 71 GTAFDGKHLYQIAEERIDKIDPATGDVLKSIPAPGHGADSGLTWAEGSLWVGQYRDRKIH 130 Query: 132 QIDPATGKLIRSIDSNRFVTGVTWVDGELWHGTWEGEESEIRRIDPASGAVIERLAMPRD 191 QIDPATG ++R+I+SNRFVTGVTWVDG+LWH TWEG+ESE+R IDP SGAV++RL MPR Sbjct: 131 QIDPATGAVLRTIESNRFVTGVTWVDGQLWHATWEGDESELRHIDPRSGAVLDRLEMPRG 190 Query: 192 TGVSGLESNGADLFYCGGGASGKVRAVRRPKGAAA 226 +SGLES+GADLFYCGGG +GK+RAVRRPK A A Sbjct: 191 VNISGLESDGADLFYCGGGGTGKIRAVRRPKSARA 225 >ref|YP_001022796.1| hypothetical protein Mpe_A3608 [Methylibium petroleiphilum PM1] gb|ABM96561.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 245 Score = 328 bits (841), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 159/197 (80%), Positives = 175/197 (88%) Query: 18 AEIVREYGPFPGVERVHGVTWDGSNVWAATGASLIAFDPASGDATRTLQRACDAGTAFDG 77 AEIVREYGPF G ER+HGVT DG VWAATG L+AFDPASG+ TRTL A DAGTAFDG Sbjct: 37 AEIVREYGPFDGAERIHGVTHDGQRVWAATGERLVAFDPASGETTRTLACAADAGTAFDG 96 Query: 78 TYLYQIAEQRIDKIDPASGKVLASIPAPGQGFDSGLTWAEGSLWVGQYRDRKIHQIDPAT 137 +LYQIAE RIDKIDPA+G+VLASIPAPG+G DSGLTWAEGSLWVGQY DRKIHQIDPAT Sbjct: 97 KHLYQIAEARIDKIDPATGQVLASIPAPGEGRDSGLTWAEGSLWVGQYLDRKIHQIDPAT 156 Query: 138 GKLIRSIDSNRFVTGVTWVDGELWHGTWEGEESEIRRIDPASGAVIERLAMPRDTGVSGL 197 GK++R+I+SNR VTGVTWVDG+LWHGTWEG+ESE+RRIDPASG V+ERL MP TGVSGL Sbjct: 157 GKILRTIESNRHVTGVTWVDGDLWHGTWEGDESELRRIDPASGGVLERLEMPAGTGVSGL 216 Query: 198 ESNGADLFYCGGGASGK 214 ES+GA L YCGGGASGK Sbjct: 217 ESDGAGLLYCGGGASGK 233