BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0358.p (161 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_728887.1| hypothetical protein H16_B0725 [Ralstonia eutro... 175 2e-42 ref|YP_002007242.1| hypothetical protein RALTA_B0561 [Cupriavidu... 169 1e-40 ref|YP_412831.1| hypothetical protein Nmul_A2146 [Nitrosospira m... 169 2e-40 ref|YP_160962.1| hypothetical protein ebA6904 [Aromatoleum aroma... 166 8e-40 ref|YP_001537399.1| hypothetical protein Sare_2566 [Salinispora ... 164 4e-39 >ref|YP_728887.1| hypothetical protein H16_B0725 [Ralstonia eutropha H16] emb|CAJ95522.1| conserved hypothetical protein [Ralstonia eutropha H16] Length = 163 Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 81/160 (50%), Positives = 118/160 (73%) Query: 1 MNIDWSELFRFSVPIEEIVVRGTLMYVFLFVLFRLVLRRDVGNVGISDFLLVVIIADASQ 60 ++ DW E ++ EI+VRGTLMY LF+LFR V+RRD+G++GI+D LLVVI+ADA+Q Sbjct: 3 LSFDWREALLLTLSPLEIIVRGTLMYWVLFLLFRFVVRRDIGSLGIADLLLVVIVADAAQ 62 Query: 61 NGMSGDANSVPDAMLLVLTLTFWNYAIDFASYYSRPLRRLLEPRPLVLIRDGKALRRNMR 120 NGM+G+ SV DA+LLV+TL WN ID +Y+S +R EPR ++L+R+G LR NMR Sbjct: 63 NGMAGNGESVADAVLLVVTLIAWNRLIDLLAYHSPAFQRFAEPRKVLLVRNGTKLRENMR 122 Query: 121 KEFVTMDEIESKLRENGVTQISHVREMIMEGDGEISVIKK 160 +E +T +E+E+K R+ G+ I V+ + +E DG++SV+KK Sbjct: 123 RESITDEELEAKYRQEGLESIDEVKALYLEADGKVSVVKK 162 >ref|YP_002007242.1| hypothetical protein RALTA_B0561 [Cupriavidus taiwanensis LMG 19424] emb|CAQ71181.1| conserved hypothetical protein [Cupriavidus taiwanensis LMG 19424] Length = 163 Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 80/160 (50%), Positives = 115/160 (71%) Query: 2 NIDWSELFRFSVPIEEIVVRGTLMYVFLFVLFRLVLRRDVGNVGISDFLLVVIIADASQN 61 ++DW E F++ EI+VRGT+MY LF+LFR V+RRD+G++GI+D LL+VI+ADA+QN Sbjct: 4 SVDWREALFFTMSPLEIIVRGTVMYWSLFLLFRFVVRRDIGSMGIADLLLIVIVADAAQN 63 Query: 62 GMSGDANSVPDAMLLVLTLTFWNYAIDFASYYSRPLRRLLEPRPLVLIRDGKALRRNMRK 121 GM+G V DA+LLV+TL WN IDF +Y +R E R ++L+RDG L NMR+ Sbjct: 64 GMAGKGEGVADAVLLVVTLIIWNRLIDFLAYKYPSFQRFAEARKVLLVRDGVKLHENMRR 123 Query: 122 EFVTMDEIESKLRENGVTQISHVREMIMEGDGEISVIKKD 161 E +T +E+E+K R+ GV I V+ + +E DG++SVIKK+ Sbjct: 124 ENITDEELEAKYRQQGVESIDSVKALYLEADGKVSVIKKE 163 >ref|YP_412831.1| hypothetical protein Nmul_A2146 [Nitrosospira multiformis ATCC 25196] gb|ABB75439.1| Protein of unknown function DUF421 [Nitrosospira multiformis ATCC 25196] Length = 202 Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 77/159 (48%), Positives = 117/159 (73%) Query: 3 IDWSELFRFSVPIEEIVVRGTLMYVFLFVLFRLVLRRDVGNVGISDFLLVVIIADASQNG 62 +DWS LF FSV EI++RGT++Y F+F+LFRL+L RDVG + I+D +L+V+IADA+ NG Sbjct: 27 VDWSRLFGFSVNPAEIILRGTVIYWFIFLLFRLILHRDVGAIAIADVMLLVLIADAASNG 86 Query: 63 MSGDANSVPDAMLLVLTLTFWNYAIDFASYYSRPLRRLLEPRPLVLIRDGKALRRNMRKE 122 MSG+ +S+ D LL+ TL WNY +D S++ +RR+++ PL L+++GK R+ MR+E Sbjct: 87 MSGNYDSITDGCLLIATLAGWNYLLDSLSFHFPAIRRIVQQPPLALVQNGKIQRKAMRRE 146 Query: 123 FVTMDEIESKLRENGVTQISHVREMIMEGDGEISVIKKD 161 +T++E+ESKLRE G+ V+ +E DGEIS+++ D Sbjct: 147 LITVEELESKLREQGIEDFREVKIAYLEEDGEISILRND 185 >ref|YP_160962.1| hypothetical protein ebA6904 [Aromatoleum aromaticum EbN1] emb|CAI10061.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1] Length = 175 Score = 166 bits (421), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 74/161 (45%), Positives = 119/161 (73%) Query: 1 MNIDWSELFRFSVPIEEIVVRGTLMYVFLFVLFRLVLRRDVGNVGISDFLLVVIIADASQ 60 M IDW+E+F ++ EI++RGT+MY +F +FR +L+RD+G VG++D LL+V+IADA+Q Sbjct: 1 MAIDWNEMFALTISPLEIIIRGTIMYWAIFAMFRTILQRDIGAVGVADVLLLVLIADAAQ 60 Query: 61 NGMSGDANSVPDAMLLVLTLTFWNYAIDFASYYSRPLRRLLEPRPLVLIRDGKALRRNMR 120 N M+G+ S+ + ++LV TL WN +D+ ++ S LRRLL+P L L+R+G+ L RN+R Sbjct: 61 NAMAGEYRSITEGLILVATLIAWNVILDYLAFRSERLRRLLQPPTLRLVREGQILHRNLR 120 Query: 121 KEFVTMDEIESKLRENGVTQISHVREMIMEGDGEISVIKKD 161 +EF++ E+ SKLRE+G+ ++ VR ME +G I+V+++D Sbjct: 121 REFMSEAELRSKLREHGIEDLAEVRSAFMESNGTITVLRQD 161 >ref|YP_001537399.1| hypothetical protein Sare_2566 [Salinispora arenicola CNS-205] gb|ABV98408.1| conserved hypothetical protein [Salinispora arenicola CNS-205] Length = 165 Score = 164 bits (415), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 75/159 (47%), Positives = 111/159 (69%) Query: 3 IDWSELFRFSVPIEEIVVRGTLMYVFLFVLFRLVLRRDVGNVGISDFLLVVIIADASQNG 62 +DW +F P+ EI+VRG++MY+ LF L R++L+R+ G G++D L++V+IADA+QNG Sbjct: 2 VDWRVVFTPDTPLLEIIVRGSVMYLTLFFLLRVLLKRESGTTGMTDLLVIVLIADAAQNG 61 Query: 63 MSGDANSVPDAMLLVLTLTFWNYAIDFASYYSRPLRRLLEPRPLVLIRDGKALRRNMRKE 122 M+ S+ D +LLV + W Y +D +Y +P RL+ P+PL L+RDG+ L RNMR+E Sbjct: 62 MASGYTSLADGVLLVAVIIGWAYLLDAVAYRWQPAARLIRPKPLALVRDGRMLHRNMRRE 121 Query: 123 FVTMDEIESKLRENGVTQISHVREMIMEGDGEISVIKKD 161 VT DE+ +LRE G+ ++ VREM ME DG+ SVI +D Sbjct: 122 LVTEDELYGQLREQGIDSLADVREMRMESDGQFSVITRD 160