BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0342.p (162 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001892362.1| Na+/solute symporter [Ralstonia pickettii 12... 239 9e-62 ref|ZP_07673971.1| transporter, solute:sodium symporter (SSS) fa... 231 3e-59 emb|CAJ01612.1| putative monocarboxylic acid permease [Methyloca... 197 3e-49 ref|YP_002543540.1| monocarboxylic acid permease protein [Agroba... 196 1e-48 ref|YP_001831224.1| Na+/solute symporter [Beijerinckia indica su... 196 1e-48 >ref|YP_001892362.1| Na+/solute symporter [Ralstonia pickettii 12J] ref|YP_002983863.1| Na+/solute symporter [Ralstonia pickettii 12D] gb|ACD28935.1| Na+/solute symporter [Ralstonia pickettii 12J] gb|ACS65191.1| Na+/solute symporter [Ralstonia pickettii 12D] Length = 502 Score = 239 bits (611), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 123/160 (76%), Positives = 138/160 (86%), Gaps = 2/160 (1%) Query: 5 PAAVMSIGAANLFTRNFWKPYVNPNVSPQGEAKVAKIVSLVVKFGALVFILFLPTKFALD 64 PAAVMSIGAANLFTRNFWKPYV P++S GE KVAK++SL+VK GALVFILFLPTKFALD Sbjct: 341 PAAVMSIGAANLFTRNFWKPYVAPDLSHAGEEKVAKVISLIVKAGALVFILFLPTKFALD 400 Query: 65 LQLLGGVWILQTFPALVFGLF--IGWFGANALLTGWAVGIIGGSWLAYADGIKPVHTFHI 122 LQLLGGVWI+QTFP++VFGLF F A ALL GWA G+IGGSWLA+ DGIKPVHTF I Sbjct: 401 LQLLGGVWIVQTFPSVVFGLFKLSNRFRAPALLAGWAAGMIGGSWLAFTDGIKPVHTFVI 460 Query: 123 GADSYTLYTGLIALALNIVVAVVVQLVFGKGGAKAPALKR 162 G D YT+YTGL ALA NIVVAVVVQL+FGK G +APAL++ Sbjct: 461 GGDKYTIYTGLAALAFNIVVAVVVQLIFGKRGEEAPALRQ 500 >ref|ZP_07673971.1| transporter, solute:sodium symporter (SSS) family [Ralstonia sp. 5_7_47FAA] gb|EFP67646.1| transporter, solute:sodium symporter (SSS) family [Ralstonia sp. 5_7_47FAA] Length = 502 Score = 231 bits (588), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 119/160 (74%), Positives = 136/160 (85%), Gaps = 2/160 (1%) Query: 5 PAAVMSIGAANLFTRNFWKPYVNPNVSPQGEAKVAKIVSLVVKFGALVFILFLPTKFALD 64 PAAVMSIGAANLFTRNFWKPYV P++S GE KVAK++SL+VK GALVFILFLPTKFALD Sbjct: 341 PAAVMSIGAANLFTRNFWKPYVAPDLSHAGEEKVAKVISLIVKAGALVFILFLPTKFALD 400 Query: 65 LQLLGGVWILQTFPALVFGLF--IGWFGANALLTGWAVGIIGGSWLAYADGIKPVHTFHI 122 LQLLGGVWI+QTFP++VFGLF F A ALL GWA G+I GSWLA++DGIKPVHTF I Sbjct: 401 LQLLGGVWIVQTFPSVVFGLFNISNRFRAPALLAGWAAGMIAGSWLAFSDGIKPVHTFVI 460 Query: 123 GADSYTLYTGLIALALNIVVAVVVQLVFGKGGAKAPALKR 162 G D YT+YTGL ALA NI+VAVVVQL+ GK G +A AL++ Sbjct: 461 GGDKYTIYTGLAALAFNIIVAVVVQLLMGKRGEEAAALRQ 500 >emb|CAJ01612.1| putative monocarboxylic acid permease [Methylocapsa acidiphila] Length = 502 Score = 197 bits (502), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 97/143 (67%), Positives = 114/143 (79%) Query: 5 PAAVMSIGAANLFTRNFWKPYVNPNVSPQGEAKVAKIVSLVVKFGALVFILFLPTKFALD 64 PAAVMSIGAANLF RNFW+ YV+P ++ GEAKVAK SL VK GAL+ ILFLPT+FALD Sbjct: 338 PAAVMSIGAANLFARNFWRAYVDPQITAHGEAKVAKTASLAVKLGALLVILFLPTQFALD 397 Query: 65 LQLLGGVWILQTFPALVFGLFIGWFGANALLTGWAVGIIGGSWLAYADGIKPVHTFHIGA 124 LQLLGG+WILQTFP +VFGLF WF A ALL GWAVG +GG+WLA+ + KP+HT G Sbjct: 398 LQLLGGLWILQTFPTVVFGLFTSWFRAGALLAGWAVGFLGGTWLAWVNNFKPLHTLTFGE 457 Query: 125 DSYTLYTGLIALALNIVVAVVVQ 147 + LY+GL+ALA NIVVA+VV Sbjct: 458 HHFVLYSGLLALAANIVVALVVN 480 >ref|YP_002543540.1| monocarboxylic acid permease protein [Agrobacterium radiobacter K84] gb|ACM25615.1| monocarboxylic acid permease protein [Agrobacterium radiobacter K84] Length = 491 Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 101/154 (65%), Positives = 121/154 (78%), Gaps = 1/154 (0%) Query: 5 PAAVMSIGAANLFTRNFWKPYVNPNVSPQGEAKVAKIVSLVVKFGALVFILFLPTKFALD 64 PAAVMSIGAANLFTRNFWK Y+NP VS GEAKVAK+ SLVVK GAL+ I+FLPT+FALD Sbjct: 338 PAAVMSIGAANLFTRNFWKAYINPQVSDAGEAKVAKMTSLVVKVGALLVIIFLPTQFALD 397 Query: 65 LQLLGGVWILQTFPALVFGLFIGWFGANALLTGWAVGIIGGSWLAYADGIKPVHTFHIGA 124 LQLLGG+WILQT PALVFGL+ WF A ALL GW VG GG++L + G KP+H +G Sbjct: 398 LQLLGGIWILQTLPALVFGLYTKWFRAPALLAGWVVGFFGGTYLVWDAGWKPLHMVSLGD 457 Query: 125 DSYTLYTGLIALALNIVVAVVVQLVF-GKGGAKA 157 S+T+YTGL+ALA NIVV+V++ V + A+A Sbjct: 458 TSFTVYTGLLALAANIVVSVILNAVMPARATARA 491 >ref|YP_001831224.1| Na+/solute symporter [Beijerinckia indica subsp. indica ATCC 9039] gb|ACB93735.1| Na+/solute symporter [Beijerinckia indica subsp. indica ATCC 9039] Length = 498 Score = 196 bits (497), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 98/144 (68%), Positives = 120/144 (83%) Query: 5 PAAVMSIGAANLFTRNFWKPYVNPNVSPQGEAKVAKIVSLVVKFGALVFILFLPTKFALD 64 PAAVMSIGAANLFTRNFWK YVNP V+P GEA+VAKI S++VK GAL+ I++LPT+FALD Sbjct: 338 PAAVMSIGAANLFTRNFWKAYVNPQVTPAGEAQVAKITSMLVKVGALLVIIYLPTQFALD 397 Query: 65 LQLLGGVWILQTFPALVFGLFIGWFGANALLTGWAVGIIGGSWLAYADGIKPVHTFHIGA 124 LQLLGG+WILQTFPAL+FGLF +F A ALL GWAVG + G++LA++DG+KP+H G Sbjct: 398 LQLLGGLWILQTFPALIFGLFTRFFKAKALLIGWAVGFVVGTYLAWSDGLKPLHKLVYGD 457 Query: 125 DSYTLYTGLIALALNIVVAVVVQL 148 + TLY GLIAL LNI+VA ++ L Sbjct: 458 WNVTLYVGLIALTLNILVAAILSL 481